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Phosphate buffered saline (pbs)

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Phosphate-buffered saline (PBS) is an aqueous buffer solution commonly used in biological research. It is a balanced salt solution that maintains a stable pH and osmotic pressure, providing a physiologically compatible environment for cells and tissues. PBS is used to wash, dilute, or suspend biological samples, such as cells or proteins, to maintain their structural and functional integrity.

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176 protocols using phosphate buffered saline (pbs)

1

Isolation and Expansion of Human Biceps Tendon Cells

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The human biceps tendon tissues were collected from two patients (men, aged 42 years and 69 years) undergoing biceps tenodesis, with consent of the patients, and approval of the Institutional Review Board of Pusan National University Yangsan Hospital was obtained (No. PNUYH-04-2021-014). Tissues were washed three times with phosphate-buffered saline (PBS; Welgene, Gyeongsan, Korea), minced with a sterile scalpel, and then placed in a 6-well tissue culture plate (SPL Life Sciences Co. Ltd., Pocheon, Korea) in Dulbecco’s Modified Eagle Medium (Gibco, Grand Island, NY, USA) supplemented with 10% fetal bovine serum (FBS; Gibco). They were treated with 100 IU/mL penicillin and 100 µg/mL streptomycin and cultured in a humidified 5% CO2 incubator at 37℃ for 2 weeks until they reached 90% confluence. The cells were then trypsinized (0.02% trypsin, 0.02% ethylenediaminetetraacetic acid [EDTA] in PBS) for 5 minutes and then centrifuged for 5 minutes at 200 × g, and the culture expanded by a second passage. The cells were then harvested with trypsin/EDTA and cryopreserved. These cryopreserved third-passage cells were later thawed and used for all experiments in the current study.
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2

Cellular Uptake of Nanoparticles

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For cellular uptake measurements, after exposure to NPs, the cells were washed twice with PBS (Welgene, Korea), followed by trypsinization, centrifuged at 1,000 rpm for 3 minutes, and further re-suspended in PBS. Afterward, the samples were analyzed immediately using a flow cytometer (FACSVerse; BD Biosciences, San Jose, CA, USA) with the FACS suite software. The side scattering parameter was used for the measurement of the intracellular NP uptake in the cells.
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3

Epithelial-Mesenchymal Transition Markers

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RPMI1640 medium, fetal bovine serum (FBS), penicillin/streptomycin; P/S and phosphate-buffered saline (PBS) were from Welgene Inc. (Gyeongsan, Korea). TGF-β1 was purchased from R&D Systems, Inc. (Minneapolis, MN, USA). Antibodies used were: β-actin (1:5000, sc-8432, Santa Cruz Biotechnology (SCB), Santa Cruz, CA, USA), Vimentin (1:1000, #5741, Cell Signaling Technology (CST), Berkeley, CA, USA), Slug (1:1000, #9585, CST), N-cadherin (1:1000, 620920, BD Biosciences, San Jose, CA, USA), E-cadherin (1:1000, 610181, BD). Secondary antibodies used were: anti-mouse HRP (1:5000, sc-2005, SCB), anti-rabbit-HRP (1:5000, SA002-500, GenDEPOT, Barker, TX, USA), anti-rabbit-Alexa488 (1:500, A21202, Thermo Fisher Scientific Inc., Waltham, MA, USA), and anti-mouse-Alexa594 (1:500, A21203, Thermo Fisher Scientific Inc., Waltham, MA, USA).
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4

Isolation and Enumeration of NK Cells

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Cell preparation tubes containing sodium citrate (Becton-Dickinson, Franklin Lakes, NJ, USA) were used to isolate PBMCs from whole blood. For storage, liquid nitrogen was used to freeze PBMCs in 10% RPMI 1640 medium (Life Technologies, Carlsbad, CA, USA), 10% dimethyl sulfoxide (Sigma-Aldrich, St. Louis, MO, USA), and 80% fetal bovine serum (FBS) (Lonza, Cologne, Germany). PBMCs were cultured in RPMI 1640 medium containing 2 mM glutamine (Life Technologies), 50 μM 2-mercaptoethanol (Sigma-Aldrich), 50 mg/mL gentamicin sulfate (Lonza), and 10% FBS. After two washes in phosphate buffered saline (Welgene, Seoul, Korea), the PBMCs were resuspended at 1 × 106 cells/mL in RPMI 1640 medium supplemented with 1% sodium pyruvate (Life Technologies), 1% MEM Nonessential Amino Acids Solution (Life Technologies), and 10% FBS, followed by incubation overnight. Assays for NK cells were always conducted following incubation for 16–20 h. To determine NK cell counts, peridinin chlorophyll protein-conjugated anti-CD3, and phycoerythrin-conjugated anti-CD56 and monoclonal antibodies (BD Biosciences, San Jose, CA, USA) were added to 200 mL of diluted blood that had been incubated on ice for 20 min, and the cells were then analyzed by flow cytometry (BD FACSCalibur, BD Biosciences). The NK cell abundance was calculated as (NK cells/mL sample) = [(CD3/CD56 cell count)/ bead count] × 100.
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5

Alizarin Red S Staining for Mineralization

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Two weeks after transfection, the samples were washed twice with phosphate-buffered saline (PBS, Welgene Inc., Republic of Korea). Then, the samples were fixed at 4 °C for 1 h with 4% paraformaldehyde (Sigma, USA) and washed again with PBS 3 times. Next, samples were stained with an alizarin red S solution (Sigma, USA) at room temperature for 30 min and washed 3 times with D. W, and observed.
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6

Comprehensive Immunohistochemistry Protocol

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Immunohistochemistry was performed using the IHC Staining Kit (Dako, Santa Clara, CA, USA). Tissue sections were deparaffinized in xylene (Thermo), hydrated in phosphate‐buffered saline (Welgene), and blocked with Background Reducing Solution (Dako). The sections were incubated with anti‐CASQ2 (#NBP1‐87304; NOVUS), anti‐aSMA (#BS70000; Bioworld Technology), anti‐FSP1 (#BS7671; Bioworld Technology), anti‐HIF1α (#NB100‐131; NOVUS), anti‐vimentin (#5741; Cell Signaling Technology), anti‐pan‐cytokeratin (#M3515; Dako), and anti‐ki67 (#9027; Cell Signal Technology) at 4 °C overnight, followed by incubation with horseradish peroxidase‐conjugated anti‐secondary antibody (Dako). The signal was developed using diaminobenzidine and hydrogen peroxide, resulting in a brown precipitate. The sections were counterstained with hematoxylin (Dako), dehydrated, and mounted. The DAB area was quantified using IHC Toolbox in ImageJ software (NIH) with 20 random histological fields from five slides of tumor tissues per group [22 (link)].
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7

Neuronal Cell Culture and Viability Assay

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CBD (10-mM stock in dimethyl sulfoxide (DMSO), storage at −20°C) was obtained from Cayman Chemical Company. Neurobasal™ medium (Thermo Fisher Scientific), B-27™ serum-free supplement (50×; Thermo Fisher Scientific), GlutaMAX™ supplement (100×; Thermo Fisher Scientific), calcein acetoxymethyl ester (AM; Thermo Fisher Scientific), ethidium homodimer-1 (Thermo Fisher Scientific), CellTracker™ Red CMTPX Dye (Thermo Fisher Scientific), Hank's Balanced Salt Solution (HBSS; Welgene), phosphate-buffered saline (PBS, 10 mM, pH 7.4; Welgene), penicillin/streptomycin (5000 U/mL of penicillin and 5000 μg/mL of streptomycin; Welgene), L-glutamic acid (Sigma), poly-D-lysine hydrobromide (Sigma), paraformaldehyde (Sigma), Triton™ X-100 (Sigma), anti-β-tubulin III antibody produced in rabbit (Sigma), Alexa Fluor™ 488 phalloidin (Invitrogen), Alexa Fluor 594 anti-rabbit goat antibody (Invitrogen), DMSO (Junsei), H2O2 (Junsei), and Accumax™ (Stemcell Technologies) were used as received. Antifade mounting medium with 4′,6-diamidino-2-phenylindole (DAPI) was obtained from Vector Laboratories.
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8

Hydrocortisone and HS Cell Culture

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Hydrocortisone was purchased from Sigma (St. Louis, MO, USA). HS was purchased from Life Technologies (Grand Island, NY, USA). Phosphate-buffered saline, 0.25% trypsin/1 mM ethylenediaminetetraacetic acid (Trypsin-EDTA), DMEM, antibiotic/antimycotic solution and FBS were purchased from WelGENE (Daegu, Korea).
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9

Hydrodynamic Injection and Transposon Delivery

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The plasmids pT3/EF5a-TAZS89A, pT2/PI3KCAE545K, and pPGK-SB13 were described previously [21 (link),22 (link)]. Hydrodynamic injection has also been previously described [21 (link)]. DNA mixtures of transposons (pT2- or pT3- plasmids) and transposase-encoding vector (pPGKSB13) were suspended in lactated Ringer’s solution and subsequently injected into the lateral tail veins of male 5–6-week-old mice (0.1 mL/g body weight). Mice were randomly assigned to hydrodynamic injection. Drugs were intraperitoneally administered daily beginning 5 weeks after hydrodynamic transfection. Doses of drugs administered was 50 mg/kg/day for vismodegib. All drugs were purchased from Selleckchem. All mice in the control group received an equal volume of 10% DMSO in phosphate-buffered saline (Welgene, Gyeongsan, Korea) by intraperitoneal injection according to the same treatment schedule.
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10

Chitin-based Nanomaterials for Bioimaging and Therapy

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The α-chitin powder from shrimp shells, sodium hydroxide (NaOH), dopamine hydrochloride, 2,3-dimethylmaleic anhydride, N, N′-dimethylformamide (DMF), trimethylamine (TEA), pyridine, anhydrous diethyl ether, gold (III) chloride hydrate (HAuCl4), sodium citrate, N-(3-dimethylaminopropyl)-N′-ethylcarbodiimide hydrochloride (EDC), sodium tetraborate, bovine serum albumin (BSA), 9,10-dimethylanthracene, formaldehyde, and 4′,6-diamidino-2-phenylindole dihydrochloride (DAPI) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Hydrochloric acid (HCl) was bought from Daejung (Seoul, Korea). Ce6 was acquired from Frontier Scientific Inc. (Logan, UT, USA). The BCA protein assay kit was bought from Thermo Fisher Scientific Inc. (Walthan, MA, USA). Dulbecco’s modified Eagle’s medium (DMEM), Roswell Park Memorial Institute (RPMI) 1640 medium, phosphate-buffered saline (PBS), ethylenediaminetetraacetic acid (EDTA), fetal bovine serum (FBS), penicillin, and streptomycin were purchased from Welgene Inc. (Seoul, Korea). Wheat Germ Agglutinin-Alexa Fluor® 488 conjugate (WGA-Alexa Fluor® 488) was purchased from Life Technologies (Carlsbad, CA, USA). The Cell Counting Kit-8 (CCK-8) was obtained from Dojindo Molecular Technologies Inc. (Santa Clara, CA, USA). FITC annexin V apoptosis detection kit I was acquired from BD Pharmingen (San Diego, CA, USA).
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