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On targetplus non targeting pool d 001810

Manufactured by Horizon Discovery
Sourced in United Kingdom

The ON-TARGETplus Non-targeting pool D-001810 is a laboratory reagent used in RNA interference (RNAi) experiments. It consists of a pool of four non-targeting small interfering RNA (siRNA) sequences that do not target any known genes in human, mouse, or rat cells. This product is designed to serve as a control in RNAi experiments to help distinguish between on-target and off-target effects.

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4 protocols using on targetplus non targeting pool d 001810

1

Silencing Caspase-9 and PTCH1 in Cells

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Small interfering RNA (siRNA) specific for Caspase‐9 (ON‐TARGETplus SMART pool human L‐003309‐00‐0005, 842), PTCH1 (ON‐TARGETplus Human PTCH1, L‐003924‐00‐0005, 5727) and nontargeting controls (ON‐TARGET plus Non‐targeting Pool, D‐001810‐10‐05) were purchased from Dharmacon Inc. (UK). Cells were plated and transfected the day after with Oligofectamine™ Transfection Reagent (Thermofisher 12252) in the presence of siRNAs according to the manufacturer's instructions. Cells were kept in the transfection mix before processing for western blot or Q‐PCR at the specified time points (24 and 72 h).
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2

Depletion of Cellular Proteins using siRNA

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To deplete cells of endogenous proteins, siRNAs were transfected into 1 × 105 cells plated in a 12-well dish using Lipofectamine RNAiMAX Reagent (Invitrogen). At 48 hr post transfection, cells were re-seeded into assay-appropriate dishes and infected 24 hr later.
siRNAs used in this study: siNT: Dharmacon ON-TARGETplus Non-targeting pool D-001810–10
siATRX: Dharmacon ON-TARGETplus ATRX pool D-006524–00
siIFI16: Dharmacon ON-TARGETplus IFI16 pool D-20004–00
siDAXX: Dharmacon ON-TARGETplus DAXX pool D-004420–10
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3

Silencing p53, p63, p73 and Puma in Cortical Neurons

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siRNA oligonucleotide sequences were used to target p53, p63, p73 and Puma (Dharmacon, ONTARGETplus SMARTpool). For negative control, a nontarget sequence was used (Dharmacon, ON-TARGETplus Non-Targeting Pool, D-001810). Cortical neurons dissociated cells were transfected with siRNA 3 days after plating, using the protocol supplied with DharmaFECT 4 (Dharmacon, T-2004–03) and performed as previously described before (Maor-Nof et al., 2013 (link)) with minor modifications. Briefly, siRNA and the transfection reagent were each diluted separately into NB medium without serum and antibiotics for 5 min; then, the siRNA was added to the medium with the transfection reagent. After an additional 20 min incubation, the transfection reagent siRNA complex was added to the dissociated cells and grown in NB medium without serum and antibiotics. 16h later, the transfection reagent was removed by replacing the medium with a complete medium and the neurons were cultured for an additional 48 hr. Lentivirus transduction was performed after. The final concentration of the siRNA was 0.1 mM. The level of the target protein Puma, reduced by its specific siRNA treatment, was evaluated by western blot analysis.
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4

Targeting LKB1, ACVR1, BMPRIA, and BMPRIB in C2C12 and HaCaT cells

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C2C12 cells were treated with 20 nM siRNA oligonucleotide pools targeting mouse Lkb1/Stk11 (Dharmacon ON-TARGETplus SMART pool L-044342-00-0020) or 20 nM of non-targeting control (Dharmacon ON-TARGETplus Non-targeting pool D-001810-10-20). HaCaT cells were treated with 10 nM of human siLKB1/STK11 (Dharmacon ON-TARGETplus SMART pool L-005035-00-0020) or 10 nM of non-targeting control siRNA, as described above. HaCaT cells were also treated with 20 nM of human siACVR1/ALK2 (Dharmacon ON-TARGETplus SMART pool L-004924-00-0005), 20 nM of human siBMPRIA/ALK3 (Dharmacon ON-TARGETplus SMART pool L-004933-00-0005) and 20 nM of human siBMPRIB/ALK6 (Dharmacon ON-TARGETplus SMART pool L-004934-00-0005). The transfection was done using SilentFect from BioRad in DMEM supplemented with 10% FBS and 48 h after transfection, cells were starved in DMEM supplemented with 1% FBS for 18-24 h prior to stimulation with BMP7.
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