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6 protocols using nitrite standard

1

Fatty Acids and Cell Signaling Assays

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Vanillylamine, eicosapentaenoic acid (EPA), docosahexaenoic acid (DHA), triethylamine and 2-methyl-2-butanol were purchased from Sigma-Aldrich (Schnelldorf, Germany). Novozym®435 was from Novozymes (Bagsværd, Denmark). n-Hexane, acetone and methanol (analytical grade) were purchased from Carlo Erba Reagenti (Milan, Italy). Roswell Park Memorial Institute (RPMI)-1640, HEPES (4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid), l-glutamine, sodium pyruvate, β-mercaptoethanol, and glucose were acquired from Thermofisher Scientific (Waltham, MA, USA). Dulbecco’s modified Eagle’s medium (DMEM), fetal bovine serum, streptomycin and penicillin were purchased from Lonza (Verviers, Belgium). LPS (E. coli O111:B4) was purchased from Sigma-Aldrich (Schnelldorf, Germany). Capsaicin, Griess reagents and nitrite standard were obtained from Cayman Chemical (Ann Arbor, MI, USA). The ELISA kit for determination of insulin was from Calbiotech Inc. (Spring Valley, CA, USA). The Ca2+ quantification kit was from Diagnosticum Rt (Budapest, Hungary). ATP was assayed with a bioluminescence kit from Thermofisher Scientific (Waltham, MA, USA). The ELISA kits for determination of MCP-1, and CCL20 were purchased from R&D Systems (Abingdon, UK).
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2

Lipase-Catalyzed Eicosapentaenoic Acid Synthesis

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Eicosapentaenoic acid, Griess reagents, and nitrite standard were obtained from Cayman Chemical (Ann Arbor, MI, USA). Novozym®435 (consisting of immobilized Candida antarctica Lipase B) was supplied by Novozymes A/S (Bagsværd, Denmark). Lipopolysaccharide (O111:B4; LPS), dopamine hydrochloride, 2-methyl-2-butanol, triethylamine, phorbol 12-myristate 13-acetate (PMA), 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium (MTT), dimethyl sulphoxide (DMSO), glutamine, HEPES and 2-mercaptoethanol were from Sigma-Aldrich (Schnelldorf, Germany). Dulbecco’s modified Eagle’s medium (DMEM), Roswell Park Memorial Institute 1640 (RPMI-1640) medium, penicillin, streptomycin, and fetal bovine serum (FBS) were purchased from Lonza (Verviers, Belgium). ELISA kits for interleukin-6 (IL-6), macrophage-inflammatory protein-3α (MIP3A), inflammatory chemokine monocyte chemotactic protein-1 (MCP-1), were purchased from R&D Systems (Abingdon, UK).
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3

Quantitative Analysis of NO Production

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To measure the NO production, nitrite concentration in the culture supernatant was determined using Griess reagent (1% sulfanilamide and 0.1% N-(1-naphthyl)-ethylenediamine dihydrochloride in 5% H3PO4) (Cayman Chemical, Ann Arbor, Michigan, USA). 100 μl of cell culture supernatant and 100 μl Griess reagent were mixed and incubated for 10 min, to color development. The absorption was estimated at 540 nm, using a Glomax Multireader spectrophotometer (Promega, Madison, WI, USA). Nitrite standard (Cayman Chemical, Ann Arbor, Michigan, USA) was used to generate a standard curve for quantification. Results were obtained from three independent experiment measurements.
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4

Antioxidant and Anti-inflammatory Evaluation

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n-Hexane, chloroform, and methanol (analytical grade) were purchased from Carlo Erba Reagenti (Milan, Italy). β-Pinene, limonene, sabinene, myrcene, γ-terpinene, linalool, neral, linalyl acetate, geranial, geranyl acetate, and β-caryophyllene were supplied by Fluka (Milan, Italy). 2,2′-Diphenyl-1-picrylhydrazyl (DPPH) and 2,2′-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) diammonium salt (ABTS), and (±)-6-hydroxy-2,5,7,8-tetramethylchromane-2-carboxylic acid (Trolox) were from Sigma-Aldrich (Milan, Italy). Dulbecco’s modified Eagle’s medium (DMEM), fetal bovine serum, streptomycin, and penicillin were acquired from Lonza (Verviers, Belgium). Lipopolysaccharides (LPS, E. coli O111:B4) was obtained from Sigma-Aldrich (Schnelldorf, Germany). Griess reagents and nitrite standard were purchased from Cayman Chemical (Ann Arbor, MI, USA).
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5

Quantifying Nitric Oxide in Irradiated Glioma Cells

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Conditioned supernatants of dHL-60 cells pre-incubated with CM from irradiated glioma cells (0 or 20 Gy) were collected and filtered through 0.2 μm filters (16534, Sartorius Stedim Biotech). Fifty microliters of conditioned supernatant or nitrite standards were added in triplicate for each condition into a 96-well plate. Twenty-five microliters of 30 µM 4,5-diaminofluorescein (DAF-2; Cayman Chemical, Ann Arbor, MI, USA) in PBS was added and incubated for 15 min at room temperature in the dark. The samples were acidified with 50 µL of 1 M HCl and incubated for 15 min, then neutralized with 50 µL 1.5 M NaOH. Fluorescence was measured at excitation and emission wavelengths of 488 and 525 nm, respectively, using a microplate reader (Hidex, Turku, Finland). A standard curve was created using the fluorescence from the nitrite standards (Cayman Chemical) as described previously [24 (link)].
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6

Quantification of Nitric Oxide Production

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The formation of nitric oxide, measured as total nitrites, was set as a functional readout and detected in media as total nitrites using Griess reagent as we have described earlier.28 Briefly, the cell culture supernatant (120 µl) was collected after agonists/antagonists treatment and transferred to another clear 96‐well plate and incubated with nitrate reductase enzyme (13 µl) (Cayman Chemical) and cofactor preparation (13 µl) (Cayman Chemical) for 2 hours at 37°C. Samples and nitrite standards (0‐25 µmole/l) (Cayman Chemical) were allowed to react with sulfanilamide (50 µl, 1% in 5% phosphoric acid) (TCI America) for 10 minutes on gentle shaking. The reaction was continued with the addition of N‐(1‐naphthyl)ethylenediamine dihydrochloride (50 µl, 0.1% in distilled water) (Sigma‐Aldrich). Absorbance was immediately read in Varioskan Flash plate reader (Thermo Fisher Scientific) at 540 nm. The total nitrites were normalized to basal and fold change values.
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