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6 protocols using lipofectamine

1

Viral Vectors for Cancer Immunotherapy

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Human lung adenocarcinoma A549 cells and murine TNBC 4T1 cells were infected with 5 and 100 MOI of Ad5/3-D24, Ad5/3-D24-CMV-TRP2, and Ad5/3-D24-CMV-OVA. pCMV-OVA was transfected as well as control with Lipofectamine (Lipofectamine 2000) according to the manufacturer’s instructions The cells were collected 48 hours post-infection and the RNA was extracted by using the RNeasy Plus Mini kit (74134, Qiagen), according to the protocol provided by the manufacturer. The RNA samples were reverse-transcribed by SuperScript-IV Reverse Transcriptase (18091050, Invitrogen) and random hexamers as primers, according to the protocol provided by the manufacturer. The reverse transcription products were used as DNA templates for PCR reactions.
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2

Plasmid and siRNA Transfection in HeLa and Fibroblasts

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Plasmids were delivered to HeLa cells with X-tremeGENE HP DNA Transfection Reagent (Roche) according to the manufacturer's instructions, and at a ratio of 2 μl X-tremeGENE HP DNA Transfection Reagent per 1 μg plasmid. Briefly, 2 μg of plasmid and 4 μl of X-tremeGENE HP DNA Transfection Reagent were added per single well of a 12-well plate, and the cells were harvested 36–48 h post-transfection. To test the splicing of cTNT e5, 200 ng of the minigene was delivered to each well. X-tremeGENE HP DNA Transfection Reagent (Mock)- and EGFP-treated HeLa cells were used as controls. For immunoblotting experiments, cells were grown in a 6-well plate and a double amount of plasmid and the transfection reagent were used. Annealed siRNA oligos were delivered to fibroblasts using Lipofectamine 2000 (Invitrogen) per manufacturer's instructions. Oligos targeting human MBNL1 (47 (link)) and MBNL2 (48 (link)) were obtained from Future Synthesis and RiboTask, respectively. The cells were harvested 72 h post siRNA delivery. Lipofectamine (mock)- and AllStars Negative Control siRNA (Qiagen; Ctrl)-treated fibroblasts were used as controls.
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3

HK-2 cells transfected with miR-146a

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HK-2 cells were cultured as previously described5 (link) and reverse transfected with the pre-miR-control or pre-miR-146a (50 nM; Ambion, Foster City, CA, USA) using Lipofectamine (Qiagen, Germantown, MD, USA) in serum-free medium according to the manufacturer’s instructions. After transfection for 24 hours, the cells were washed and exposed to 50 ng/ml IL-1b for an additional 24 hours.
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4

Knockdown of Osteopontin via shRNA

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The shRNA against OPN was conducted by delivery of shRNA plasmid DNA into cells using the lipofectamine method with a ratio of 5 μg DNA per 30 μL lipofectamine (Qiagen, Hilden, Germany). Cells transfected with plasmid of luciferase gene serve as the vector control. After DNA transfection, cells are grown in regular medium for 48 hours and transfection efficacy is evaluated by luciferase bioactivity.
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5

PTEN Overexpression and Transfection

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Approximately 2 × 106 cells/well were seeded in 6-well plates. After 24 h of culturing, cells were transfected with plasmids such as 809 pcDNA3-GFP-PTEN (Plasmid #10759) [24 (link)] or empty vector pCMV-PTEN (Plasmid #28298) by using 8 µL of the transfection reagent, Lipofectamine (Qiagen). After 24 h of incubation at 37°C in 5% CO2, cells were subsequently subjected to in vitro assays.
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6

Investigating miR-34a Regulation in Lung Fibroblasts

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A synthetic scrambled miR mimic and a miR‐34a mimic (catalog numbers SI03650318 and MSY0000542, respectively; Qiagen) were transfected into primary mouse lung fibroblasts with HiPerFect (Qiagen) or MLg cells with Lipofectamine® 2000 or 3000, as per manufacturer's instructions. Locked nucleic acid (LNA) oligonucleotides (purchased from Exiqon) included a scrambled (inert) sequence (5′‐ACGTCTATACGCCCA‐3′); an antimiR directed against miR‐34a (5′‐AGCTAAGACACTGCC‐3′) and miRCURY LNA™ microRNA Target Site Blockers (herein referred to as target site blockers) directed to target the interaction between the two miR‐34a binding sites in the mouse Pdgfra 3′‐UTR and miR‐34a: 5′‐TTGGCAGTATTCTCCA‐3′ (TSB1) and 5′‐AGGCAGTGATACAGCT‐3′ (TSB2) (see Fig 3A). In vitro, synthetic oligonucleotides were transfected into MLg cells with Lipofectamine® 2000. When combined, synthetic microRNA mimics and LNA target site blockers were applied together as a cocktail, at a final cumulative concentration of 160 nM (Fig 4B). In vivo, both target site blockers (applied as a cocktail of a 1:1 mixture of TSB1 and TSB2) and a scrambled or miR‐34a‐specific antimiR were all applied by intraperitoneal injection at a dose of 10 mg/kg at P1 and P3, in ddH2O.
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