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4 protocols using ep1863y

1

Cell Culture Preparation for Western Blot

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For sample preparation, when the cell culture reaches to 80% confluence, the cells were collected and split for 40 minutes on ice, the supernatant was denatured in 5x loading buffer containing SDS in boiling water for 10 minutes. 5% non-fat dry milk dissolved in TBST (TBS containing 0.1% Tween-20) was used for blocking and antibody dilution. The following antibodies and dilutions were used: ZEB1 (1:500, 21544-1-AP, Proteintech), VIM (1:1000, 5741s, Cell Signaling Technology), E-CAD (1:1000, 20874-1-AP, Proteintech), actin (1:1000, HC201, TransGen), MSN (1:2000, EP1863Y, abcam), goat anti-mouse IgG-HRP (1:5000, sc-2005, Santa Cruz), goat anti-rabbit IgG (1:5000, sc-2004, Santa Cruz). Western HRP Substrate (WBLUF0500, Millipore) was used to detect horseradish peroxidase conjugated secondary antibodies.
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2

Moesin and gpALL Pulldown Assays

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For moesin immunoprecipitation experiments, 5 µl of unconjugated anti-moesin mAb (EP1863Y, Abcam) was mixed with 200 µl of the T cell protein extract (200 µg/ml) and incubated overnight at 4°C; then, 50 µl of µMACS Protein A Microbeads (Miltenyi Biotec) were added (2 h, 4°C). The immunoprecipitate’s washing, elution, and separation were performed according to the manufacturer’s recommendations. For gpALL pull-down, 200 µl of the T cell protein extract (200 µg/ml) was mixed with 30 µL of biotinylated ALL (2.2 mg/ml) and incubated at 4°C overnight; then, 100 µl of Streptavidin MicroBeads (Miltenyi Biotec) were added and further incubated for 2 h, at 4°C; the precipitate’s elution, washing, and separation were performed with 500 mM GalNAc following manufacturer’s instructions. The precipitates were used in later experiments.
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3

T Cell Proliferation Assay with Stimulants

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Splenocytes were obtained by perfusion with DPBS and red cells were removed using hypotonic NH4Cl lysing buffer. Cells were stained with CFSE (Thermo Fisher) as previously reported (36 (link)) and T lymphocytes were purified by negative selection using the Pan T cell Isolation Kit II (Miltenyi Biotec). Cells (2.5 × 105 cells/ml) were incubated in complete RPMI medium (RPMI 1640 supplemented with 2 mM L-glutamine, 10 mM non-essential amino acids, 1 mM sodium pyruvate, 25 mM HEPES, 50 mM 2-β mercaptoethanol, and 50 U/ml penicillin-streptomycin from GIBCO and 10% FCS (ByProducts) in 96-well plates (Sarstedt) at 37°C, 5% CO2. Cells were stimulated with 3 µg/ml soluble anti-CD3 (145-2C11, in house purified) and 3 µg/ml soluble anti-CD28 (37.51; Tonbo Biosciences), 5 µg/ml ALL, and/or 5 µg/ml anti-moesin (EP1863Y, Abcam). Seventy-two hours later cells were harvested, washed (DPBS, 1% FCS), and stained with the corresponding mAb combination.
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4

Immunohistochemical Analysis of Tissue Samples

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The tumor tissues or the livers of mice were fixed in formalin and processed for paraffin embedding. Sectioned samples were de-paraffined in xylene and rehydrated in graded alcohol. Antigen retrieval was done according to the manufacture's protocol (MVS-0100, Maxvision), and then the endogenous peroxidase was inactivated with 3% hydrogen peroxide methanol solution, blocked with animal non-immune serum (SP KIT-B, Maxvision) and incubated with primary antibodies overnight at 4℃, and then incubated with secondary antibodies for 15 minutes. Slides were stained using the detection kit (DAB-0031, Maxvision), cell nucleus was stained with hematoxylin (ZLI-9610, ZSGB-BIO). The following antibodies and dilutions were used for immunohistochemistry: MSN (1:150, EP1863Y, Abcam), peroxidase-conjugated secondary antibody (KIT-5010, Maxvision), GFAP (ZM-0118, ZSGB-BIO), AFP (ZM-0009, ZSGB-BIO).
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