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2 protocols using phospho p tak1

1

Immunoblotting Workflow and Antibodies

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Immunoblotting analyses were performed with precast gradient gels (Bio-Rad) using standard methods. Briefly, cells were lysed in radioimmunoprecipitation assay (RIPA) buffer and normalized using a BCA protein assay kit (Thermo Scientific). Proteins were separated by sodiumdodecyl sulphate-polyacrylamide gel electrophoresis (SDS–PAGE) and blotted onto a PVDF membrane (Millipore). Membranes were probed with the specific primary antibodies and then with peroxidase-conjugated secondary antibodies. The bands were visualized by enhanced chemiluminescence using Hyperfilm ECL. Uncropped images of immunoblots presented in the main paper are provided in Supplementary Fig. 7. The following antibodies were used: antibodies against NOX4 (1:2,000, ab133303), p16 (1:2,500, ab51243), p22phox (1:1,000, ab80896) (Abcam, Cambridge, USA); Tak1 (1:1,000, #5206), Phospho(p)-Tak1 (1:1,000, #4508), NF-κB/p65 (1:1,000, #8242), Phospho(p)-NF-κB/p65 (1:1,000, #3039), Lamin A/C (1:1,000, #4777), p-Rb (Ser780, 1:1,000, #9307), p-Rb (Ser795, 1:2,000, #9301), p-Rb (Ser807/811, 1:1,000, #8516), Rb (1:1,000, #9309) and E2F1 (1:1,000, #3742) (Cell Signaling Technology, Beverly, MA, USA); Kras (1:500,sc-521), IκB-α (1:200, #SC-371), (Santa Cruz Biotechnology, Santa Cruz, USA) and β-actin (1:20,000, #5316) (Sigma-Aldrich, St Louis, MO).
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2

Inflammatory Response Regulation Protocol

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Dulbecco's modified eagle medium (DMEM), fetal bovine serum (FBS), streptomycin, and penicillin were purchased from WelGene, Daegu, Republic of Korea. LPS and MTT were obtained (Sigma, St. Louis MO, USA). TRIzol was obtained from Invitrogen (Carsbad, CA, USA). Polymerase chain reaction (PCR) primers were obtained from Bioneer (Daejeon, Republic of Korea). Antibodies for iNOS, COX2, IRAK1, phospho (p)-TAK1, p-IKKα/β, p-IκB/α, p-NF-κB, p-JNK, total (T)-JNK, p-P38, T-P38, p-ERK, T-ERK, and β-actin were purchased (Cell Signaling Technology, USA).
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