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Flow jo version x flow cytometry analysis software

Manufactured by FlowJo

FlowJo (version X) is a flow cytometry analysis software. It provides tools for visualizing and analyzing data from flow cytometry experiments.

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2 protocols using flow jo version x flow cytometry analysis software

1

Flow Cytometric Analysis of Circulating Stem Cells in HCC

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For flow cytometry analysis, a total of 500 µl peripheral blood was collected from each patient with HCC. The blood samples were hemolyzed using 2 ml ammonium chloride solution (STEMCELL Technologies, Inc.), vortexed and incubated at room temperature for 30 min. Subsequently, the samples were washed in PBS and centrifuged at 500 × g for 5 min at 4°C, the supernatant was discarded and the remaining cells (peripheral blood mononuclear cells) were resuspended in PBS. The samples were then stained with monoclonal antibodies against CD34 (1:50; cat. no. 11-0349), CD133 (1:100; cat. no. 17-1338) and VEGFR-2 (1:50; cat. no. 12-5821) (all from Affymetrix; Thermo Fisher Scientific, Inc.) at 4°C for 1 h. Next, the samples were subjected to two-dimensional side scatter-fluorescence histogram analysis using a FACS instrument (Beckman Coulter, Inc.). Data analyses were performed using Flow-Jo (version X) flow cytometry analysis software (FlowJo LLC).
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2

Annexin V-FITC Apoptosis Assay

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Cells were seeded at a density of ~3x10 5 /well into 6-well plates and subsequently transfected with 200 pmol miR-24-2 mimic, inhibitor, NC or inhibitor NC. After 48 h, cells were harvested and washed twice with cold PBS. Cells were subsequently resuspended in 100 µl 1X binding buffer and 5 µl annexin V-fluorescein isothiocyanate, following which 3 µl propidium iodide (all from Invitrogen; Thermo Fisher Scientific, Inc.) was added into each cell suspension. A total of 15 min later, 400 µl binding buffer was added to each tube. A COULTER ® EPICS ® XL™ Flow Cytometer (Beckman Coulter, Inc., Brea, CA, USA) was subsequently used to analyze the apoptosis rate. FlowJo (version X) flow cytometry analysis software (FlowJo LLC, Ashland, OR) was used in the study. Statistical analysis. A paired t-test was used to compare the expression levels of miR-24-2 in matched tissues. An unpaired Student's t-test was used to analyze assays characterizing the phenotypes of cells. All statistical analyses were performed using SPSS software version 19.0 (IBM SPSS, Armonk, NY, USA) and data are presented as the mean ± standard deviation. P<0.05 was considered to indicate a statistically significant difference.
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