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A 11056

Manufactured by Thermo Fisher Scientific
Sourced in United States

The A-11056 is a laboratory equipment product manufactured by Thermo Fisher Scientific. It is a versatile instrument designed for use in various scientific applications. The core function of the A-11056 is to perform precise measurements and analysis, although a more detailed description cannot be provided while maintaining an unbiased and purely factual approach.

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18 protocols using a 11056

1

Fluorescent Dual-Label Immunohistochemistry

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For simultaneous visualization of both tracers, one series of brain tissue (n = 4) underwent fluorescent double-label immunohistochemical processing. Tissue was rinsed from the cryoprotectant storage solution with several washes in KPBS, and then incubated for 72 h at 4 °C in a blocking solution [KPBS containing 0.3 % Triton X-100, 2 % normal donkey serum (017-000-001; Jackson ImmunoRe-search, West Grove, PA, USA)], with both primary antibodies: anti-FG (1:10,000) and anti-CTB (1:5000). After rinses in KPBS, tissue was incubated for 1 h in the dark in the blocking solution containing the secondary antibodies: Alexa 488 anti-rabbit (1:200; A21206; Invitrogen, Carlsbad, CA, USA) and Alexa 546 anti-goat (1:200; A11056; Invitrogen, Carlsbad, CA, USA), both raised in donkey serum. Following rinses in KPBS, tissue was mounted in semidarkness onto slides (SuperFrost Plus), dried, coverslipped with Vectashield HardSet Mounting Medium with DAPI (H-1500; Vector Labs, Burlingame, CA, USA), and stored at 4 °C until analysis.
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2

Immunohistochemical Staining of Tissue Sections

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Tissue cryosections were thawed and dried for 30 min at room temperature. After rehydration with ice‐cold PBS for 5 min, samples were permeabilized with ice‐cold 0.3% triton in water for 10 min. Samples were then blocked with 5% normal serum donkey and 0.3% triton in 1× PBS for 30 min. Primary antibodies against monoclonal rat anti‐endomucin (Santa Cruz, Cat# sc‐65495, 1:100), or polyclonal goat anti‐CD31/PECAM‐1 (R&D systems, #AF3628, 1:200), polyclonal rabbit anti‐osterix/Sp7 (Abcam, ab22552, 1:200), or monoclonal rabbit anti‐VE‐cadherin (Abcam, [EPR18229] ab205336, 1:200) were diluted in 5% normal serum donkey in PBS with their respective dilution and incubated overnight at 4 °C. Samples were then washed with ice‐cold PBS three times for 5 min. Secondary antibodies (Alexa 546, A11056, Invitrogen; Alexa 488, A21206, Invitrogen; Alexa 647, A31573, Invitrogen) were diluted in PBS with a 1:200 dilution. For some tissue sections, DAPI was added as well. Samples were then incubated with a secondary antibody solution for 3 h before washing with PBS was performed. Samples were then mounted with Fluoromount G (#Cat 0100–01, Southern Biotech).
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3

Macrophage Infiltration and Inflammatory Markers in Sciatic Nerve Injury

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The recovered control, sham and CCI sciatic nerves were prepared for immunohistochemical examination using mouse anti rat CD68 antibody (MCA341R, AbD Serotech, Raleigh, NC) and Alexa fluor 488 donkey anti-mouse secondary antibody (A-21202, Invitrogen, Carlsbad, CA) to assess the presence of macrophages that infiltrate the nerve. The double immunofluorescence studies were also performed to reveal the expression of COX-2 and PGE2 in relationship to the CD68 positive infiltrating macrophages using, rabbit anti-COX-2, 1:100 (ab15191, AbD Serotech) and rabbit anti-prostaglandin E2 antibody, 1:100 (ab2318, AbD Serotech) along with mouse CD68, 1:100 (MCA341R, AbD Serotech) in treated and untreated rat groups. The secondary antibodies used were Alexa fluor 488 donkey anti-mouse, 1:200 (A-21202, Invitrogen), Alexa fluor 546 donkey anti-goat, 1:200 (A-11056, Invitrogen) and Alexa fluor 647 donkey anti-rabbit, 1:200 (A-31573, Invitrogen). All the antibody dilutions were prepared using 1:20 normal donkey serum in 1× PBS, pH 7.4. Antigen retrieval was performed during double immunofluorescence with COX-2 and CD68 primary antibodies, using sodium citrate buffer (10mM sodium citrate, 0.1% Tween 20, pH 8.5). Antigen retrieval was not required during double immunofluorescence with PGE2 and CD68 primary antibodies.
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4

Immunostaining of LMMP Preparations

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LMMP preparations from either P14 or 14 week-old Plp1::GFP mice were fixed for 4-6 hours in 4% paraformaldehyde. Tissues were blocked in PBS supplemented with 10% donkey serum, 10% bovine serum albumin, and 1% triton in PBS for 1 hour at room temperature. LMMP preparations were then incubated at 4°C overnight in primary antibodies, which were diluted in the blocking solution. Primary antibodies included goat anti-GFAP (1:500; Abcam ab53554) and goat anti-Sox2 (1:50; R&D Systems AF2018). Tissues were then incubated for 3 hours at room temperature in secondary antibodies, which were also diluted in blocking buffer. The secondary antibody used was donkey anti-goat IgG (1:500; Alexa Fluor 546; Invitrogen A-11056). Cell nuclei were stained with DAPI (Invitrogen D1306) and tissues were mounted with aqua-poly/mount (Polysciences Inc 18606-20). Images were acquired at 1024 × 1024 pixels using a 20X air immersion objective on a ZEISS Laser Confocal Scanning Microscope 800 with Airyscan.
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5

Deciphering Neuroinflammatory Pathways in Neuropathic Pain

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The fixed nerves from control, sham and CCI rats were sliced into 20 μm thick longitudinal cryosections. Double immunofluorescence studies were performed to examine the infiltration of macrophages (CD68) along with the presence of caspase-1, IL-18, IL-1β and IL-1α using mouse anti-CD68, 1:100 (MCA341R, AbD Serotec), rabbit anti-caspase-1, 1:50 (caspase-1 p10 (M20) sc514, Santa Cruz Biotechnology), rabbit anti-IL-18, 1:100 (R1186, Acris Antibodies), rabbit anti-IL-1β, 1:100 (ab9787, Abcam) and goat anti-IL-1α, 1:100 (ab9875, Abcam) primary antibodies. The secondary antibodies used were Alexa fluor 488 donkey anti mouse, 1:200 (A-21202, Invitrogen), Alexa fluor 546 donkey anti goat, 1:200 (A-11056, Invitrogen) and Alexa fluor 647 donkey anti rabbit, 1:200 (A-31573, Invitrogen). All the antibody dilutions were prepared using 1:20 normal donkey serum in 1× PBS, pH 7.4. Antigen retrieval was performed using sodium citrate buffer (10 mM sodium citrate, 0.1% Tween 20, pH 6.0 and pH 8.5). Confocal microscopy was performed on a Leica SP2 spectral Laser Scanning Confocal microscope.
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6

Immunostaining of LMMP Preparations

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LMMP preparations from either P14 or 14 week-old Plp1::GFP mice were fixed for 4-6 hours in 4% paraformaldehyde. Tissues were blocked in PBS supplemented with 10% donkey serum, 10% bovine serum albumin, and 1% triton in PBS for 1 hour at room temperature. LMMP preparations were then incubated at 4°C overnight in primary antibodies, which were diluted in the blocking solution. Primary antibodies included goat anti-GFAP (1:500; Abcam ab53554) and goat anti-Sox2 (1:50; R&D Systems AF2018). Tissues were then incubated for 3 hours at room temperature in secondary antibodies, which were also diluted in blocking buffer. The secondary antibody used was donkey anti-goat IgG (1:500; Alexa Fluor 546; Invitrogen A-11056). Cell nuclei were stained with DAPI (Invitrogen D1306) and tissues were mounted with aqua-poly/mount (Polysciences Inc 18606-20). Images were acquired at 1024 × 1024 pixels using a 20X air immersion objective on a ZEISS Laser Confocal Scanning Microscope 800 with Airyscan.
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7

Antibody Validation for Germ Cell Markers

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Primary antibodies used in this study were: DDX25 (sc-51271) and Hiwi (sc-22685) from Santa Cruz Biotechnology; DDX4 (ab13840), EIF4A3 (ab32485), and SMG6 (ab87539) from Abcam; PIWIL1 (G82) from Cell Signaling Technology; FYCO1 (HPA035526 and SAB1400697) from Sigma-Aldrich; GAPDH (5G4) from HyTest; γH2AX antibody (05-636) and PIWIL2 clone 13E-3 (MABE363) from Millipore; SMG7 (A302-170A) from Bethyl Laboratories and hVasa (AF2030-SP) from R&D systems. Secondary antibodies conjugated with Alexa Fluor 488, 546, and 647 made in donkey were from Thermo Fisher Scientific (A-21202, A-21206, A-11055, A10036, A10040, A-11056, A-21203, A-21207, A-11058, A-31571, A-31573, A-21447). HRP-linked anti-rabbit IgG (NA934) and HRP-linked anti-mouse IgG (NA031) were from GE Healthcare Life Sciences.
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8

Immunofluorescent Staining of Podocalyxin, Perilipin, and SMA

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Immunofluorescent staining on podocalyxin (PdcX), perilipin (PLN) and smooth muscle actin (SMA) and expression was performed as described in detail by Kasza et al. (Kasza et al., 2014). Briefly, tissues were deparaffinized, re-hydrated, and processed for heat-induced epitope retrieval. After blocking, samples were incubated overnight with the primary antibody, and the secondary antibodies for 1 h. Samples were rinsed and incubated with conjugated antibodies for 1 h, then visualized on a confocal microscope (Nikon A1RS Confocal Microscope). The catalog numbers of the antibodies are as follows: podocalyxin (AF1556, R&D Systems), perilipin–Alexa Fluor647 conjugate (NB110-40760AF647, Novus Biologicals), SMA-FITC conjugate (F3777, Sigma-Aldrich), donkey anti-goat Alexa Fluor 546 (A11056, Thermo Fisher Scientific). Normal goat serum for blocking was obtained from Jackson ImmunoResearch Laboratories, and ProLong Gold Antifade Reagent with DAPI for nuclear staining was from Invitrogen.
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9

Multicolor Immunostaining of Isolated Islets

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Immunostaining was conducted on isolated islets, fixed in 4% paraformaldehyde before being permeabilised using 0.1% Triton X-100 (Sigma). After blocking with 5% goat serum, islets were incubated overnight (4°C) with primary antibodies before incubation with secondary antibodies. Fluorescent staining was visualised using a laser-scanning confocal microscopy (BioRad) controlled by LaserSharp2000 (BioRad).
Antibodies used in this study were: rabbit FITC 495-conjugated anti-GFP (1:250; DS-PB-00926; InsightBio, Wembley, United Kingdom), mouse anti-glucagon (1:1000; G2654; Sigma), guinea-pig anti-insulin (1:400; A0564; Dako, Santa Clara, California, United States), goat anti-somatostatin (1:100; sc-7819; Santa Cruz Biotechnology, Dallas, Texas, United States); Alexa Fluor 633 goat anti-mouse IgG (1:500; A-21052; ThermoFisher); Alexa Fluor 594 goat anti-guinea pig IgG (1:500; A-11076; ThermoFisher); and Alexa Fluor 546 donkey anti-goat IgG (1:100; A-11056; ThermoFisher).
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10

Oxidative Stress Analysis of OCCC Cells

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2×104 CTV-labeled OCCC cells were cultured alone, with 2×104 CD10- enMSCs, or with 2×104 CD10+ enMSCs on a coverslip in a 6-well plate. Erastin was added to the culture medium at 1μM. Day 3 after the co-culture, cells were fixed and incubated with anti-4-HNE (Millipore Cat# AB5605, RRID: AB_569332) overnight at 4C°. After washing with PBB (0.5% BSA in PBS), cells were incubated with AlexaFluor 546 conjugated secondary antibody (Thermo Fisher Scientific Cat# A-11056, RRID: AB_2534103) for 1 hour at room temperature.
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