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Qexactive orbitrap lc ms system

Manufactured by Thermo Fisher Scientific

The QExactive Orbitrap LC-MS System is a high-resolution mass spectrometry (MS) instrument designed for liquid chromatography (LC) applications. It combines the Orbitrap mass analyzer with a quadrupole mass filter, enabling high-mass accuracy and resolution for a wide range of analytical workflows.

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2 protocols using qexactive orbitrap lc ms system

1

Fluorescent Protein Conjugation Protocol

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Purified CA5C-sfGFP was diluted to 500 nM in PBS (pH 7.4) containing 1 mM TCEP and left to incubate for 30 min at 37 °C. Linker (100 μM final concentration) or equivalent amounts of DMSO were then added to the solution and it reacted for 3 h at room temperature. The reaction mixtures were then concentrated and exchanged to ammonium bicarbonate (50 mM, pH 8.0) using an Amicon centrifugal filter (MWCO: 10 kDa). Samples were then analyzed using a QExactive Orbitrap LC-MS System (Thermo Fisher).
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2

Phytochemical Profiling of PWE by LC-MS

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The chemical composition of PWE was analyzed on a Thermo Scientific Q Exactive Orbitrap LC/MS System. The water phase after being dried by using a lyophilizer was dissolved in methanol (100 ug/mL) and analyzed on a Shimadzu Shim-pack GIST C18 column (2.1 mm × 100 mm, 3 μm, Shimadzu, Kyoto, Japan). Ultrapure water (solvent A) and acetonitrile (solvent B) were used as mobile phases, and the mobile phase was added 0.1% formic acid (v/v). The gradient was as follows: 0–3 min, 10% B; 3–20 min, 10–40% B; 20–25 min, 40–60% B; 25.01–30 min, 100% B. The flow rate of mobile phases was 0.2 mL/min, the sample volume was 2.0 µL, and the temperature of the column oven was maintained at 35 °C. Data were collected in a negative ion mode. The mass range of the scan was m/z 50 to 1000. Other parameters for mass spectrometry were as follows: auxiliary gas flow, 8.0 L/min; sheath gas flow rate, 32.0 L/min; sweep gas, 4.0 L/min; spray voltage, 3.3 kV; S-lens RF level, 50%; resolution, 70,000; heater temperature, 350 °C; and capillary temperature, 320 °C. The total ion chromatogram, mass data, and MS/MS fragment ion data were analyzed by Xcalibur software. The identification of each compound in the PWE was compared with the reported data in the literature or the Metabolomics Innovation Center database.
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