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8 protocols using lymphocyte separation solution

1

Tim-3 Protein Expression in CLL Patients

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Fresh peripheral blood (5 mL) was collected from CLL patients and healthy controls. Peripheral blood mononuclear cell (PBMC) was isolated using a lymphocyte separation solution (TBD Science). Peripheral blood lymphocytes were lysed in radioimmunoprecipitation assay buffer with protease; phosphatase inhibitors, as well as phenylmethanesulfonylfluoride and the supernatant, were collected after centrifugation. The protein concentration was determined by the bicinchoninic acid method. Sodium dodecyl sulfate (SDS) loading buffer was added to denature the proteins (all the reagents for protein extraction were purchased from Solarbio Company). Proteins were isolated by 12% SDS‐polyacrylamide gel electrophoresis and transferred to the polyvinylidene fluoride (PVDF) membrane (300 mA, 90 min). PVDF membrane was blocked for 1 h by 5% skimmed milk and then incubated with a polyclonal rabbit anti‐Tim‐3 (Proteintech Group) overnight at 4°C. Goat anti‐rabbit (Solarbio) horseradish peroxidase‐conjugated secondary antibody was incubated at room temperature for 1 h. β‐Actin (Cell Signaling Technology) in equal quantities was used as an internal reference. The enhanced chemiluminescence (Biogot Technology) method evaluated the protein expression level.
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2

Treg Cell Modulation by XBJ Treatment

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SF samples were pretreated in hyaluronidase at 37°C for 30 min. The lymphocyte suspension was isolated using lymphocyte separation solution (TBDscience, China). After centrifugation, 5 × 105 cells were resuspended in Dulbecco's modified Eagle's medium (DMEM, HyClone, USA) containing 10% fetal calf serum (FCS, Biological Industries, Israel), inoculated into 24-well plates, and incubated with 10 μl of XBJ (CHASE SUN, China) for 48 h. The total cell suspension was collected, anti-human-CD4-FITC antibody (BioLegend, USA) and anti-human-CD25-PE antibody (BioLegend) were added, and the mixture was incubated at 4°C in the dark for 30 min. The proportion of Treg cells in the SF before and after XBJ stimulation was measured using a flow cytometer (ACEA, USA). Next, the cell suspension was centrifuged at 1000 ×g and 4°C for 15 min. The supernatant was used to measure changes in the secretion levels of IL-4 and IFN-γ using the human Th1/Th2 cytokine detection reagent kit (Cell-Genebio, China). The mean fluorescence intensity (MFI) was detected using a flow cytometer. Th1 cells are characterized by IFN-γ secretion, while Th2 cells mainly secrete IL-4. Based on the obtained MFI values of IFN-γ and IL-4, the Th1/Th2 ratio was calculated.
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3

Purification of Tim-3+ CD4+ T Cells

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PBMCs were isolated from six patients with aGVHD using a lymphocyte separation solution (TBD Science). Subsequently, the Negative Selection CD4+ T‐cell sorting kit (STEMCELL Technologies) was used to enrich CD4+ T cells. The sorted CD4+T cells were re‐suspended to 5 × 107/mL and incubated with Tim‐3‐PE antibody (BD, Clone:7D3, 2 µg/mL) in the dark for 15 min. Then, the incubation with 100 μL of EasySep® PE Selection Cocktail (STEMCELL Technologies) and 50 μL of EasySep® Magnetic Nanoparticles (STEMCELL Technologies) was performed. Finally, Tim‐3+CD4+ T cells were evaluated by flow cytometry, and their purity was over 90%.
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4

Isolation of Activated PD-1+ Lymphocytes

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The anesthetized C57BL/6J mice were sacrificed by euthanasia and suspension of spleen cells was obtained in a sterile environment. After centrifugation in lymphocyte separation solution (TBDScience, China), the spleen lymphocytes were separated from the middle layer and lymphocytes were removed by red blood cell lysis buffer (Absin, China). Harvested lymphocytes were cultured in RPMI 1640 complete medium containing 6.25 µg/mL concanavalin A (ConA, Sigma, USA) for 72 h to prepare PD-1+ lymphocytes.
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5

Isolation and Activation of Human CD4+ T Cells

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Using Ficoll-Paque, peripheral blood mononuclear cells (PBMCs) were isolated through density centrifugation [16 (link),17 (link)]. In short, whole blood is collected and gently overlaid onto the liquid surface of the lymphocyte separation solution (TBD Science, Tianjin, China). Subsequently, centrifuge 600g for 21 min. The PBMCs precipitate was collected in the intermediate layer between the plasma and the separation solution, the cells were carefully cleaned twice with 1X phosphate buffered saline (PBS), and centrifuged for further use. To isolate human CD4+ T cells from PBMCs, magnetic bead separation (130–045–101, Miltenyi Biotec, Germany) was employed. The human CD4+ T cells that were isolated were subsequently cultured in complete RPMI 1640 culture medium (Gibco), enriched with 10% fetal bovine serum (Gibco), at a concentration of 1 × 106 cells/ml. To activate human CD4+ T cells, leukocyte activator (550583, BD Biosciences) was introduced, and the cells were cultured for 6 h. Following the incubation period, the cells were harvested for flow cytometry analysis. Additionally, serum and a fraction of PBMCs were obtained from all study participants and preserved at −80 °C for subsequent analysis.
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6

Functional Profiling of T Cell Subsets

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BM was diluted 1:1 with PBS before separation of bone marrow mononuclear cells (BMMCs) with lymphocyte separation solution (TBD Science, China) density gradient centrifugation. The isolated BMMCs were cultured in RPMI-1640 medium (GIBCO) containing 10% fetal bovine serum and stimulated with anti-CD3/CD28 antibody (2 and 5μg/ml) or Phorbol-12-myristate-13-acetate (PMA, 100ng/ml) and ionmycin (1ug/ml) for 5 h. Anti-CD107a-APC (W18263B), CD28-FITC and Golgiplug (BD Pharmingen, San Diego, CA, USA) were added at the start of the incubation. Cells were harvested for surface staining with CD3-Percp, CD8-APCR700, CD45RA-APC-H7, CCR7-V450, PD-1-PE-Cy7, TIGIT-BV605 and intracellularly stained with IFN-γ-BV510(4S.B3).
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7

Characterizing Porcine Lymphocyte Subsets

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Peripheral blood lymphocytes were isolated using Lymphocyte Separation Solution (TBD Science Inc., China) according to the manufacturer’s instructions. The monoclonal antibodies used were as follows: mouse anti-pig CD3ε (clone P2G10, FITC-conjugated, 559582; BD Biosciences), mouse anti-pig CD4α (clone 74-12-4, PerCP-Cy5.5-conjugated, 561474; BD Biosciences), mouse anti-human T-bet (clone O4-46, phycoerythrin [PE]-conjugated, 561268; BD Biosciences), and mouse anti-pig IFN-γ (clone P2G10, AlexaFluor 647-conjugated, 561480; BD Biosciences). The stained cells were analyzed on a FACScalibur™ flow cytometer (BD Biosciences), and data analysis was performed using FlowJo software (Tree Star).
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8

Isolation of Peripheral Lymphocytes

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Peripheral blood lymphocytes were obtained by Ficoll gradient centrifugation using lymphocyte separation solution (TBD Science Inc., Tianjin, China), according to the manufacturer’s instructions. In brief, 2 ml of peripheral blood samples were diluted with an equal volume of diluent and then were gently added in 4 ml of Ficoll solution. Lymphocytes were stratified over Ficoll solution by centrifugation at 400 × g for 20 min at room temperature. Recovered lymphocytes were washed three times with RPMI 1640 medium (Gibco, Grand Island, NY, United States). The living lymphocytes were counted using trypan blue staining method and were used for flow cytometry analysis.
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