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Polymyxin b pmb

Manufactured by Merck Group
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Polymyxin B (PMB) is a broad-spectrum antibiotic that is effective against many types of Gram-negative bacteria. It is a polypeptide antibiotic that disrupts the cell membrane of bacteria, leading to cell death. PMB is commonly used as a laboratory tool for research purposes.

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20 protocols using polymyxin b pmb

1

Anti-inflammatory Activity Evaluation of Fungal Extracts

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To assess anti-inflammatory activity, RAW264.7 cells were induced with 250 ng/mL of lipopolysaccharide (LPS) in the presence or absence of 1 mg/mL of fungal extracts or purified samples for 6 h. Polymyxin B (PMB) (100 units, Sigma) was used as a positive control based on its ability to inhibit LPS [1 (link),2 (link),30 (link),31 (link)]. The measurement of TNF-α production was determined using ELISA, as described in Section 3.6. Statistical analysis was performed using one-way ANOVA. Sidak’s or Dunnett’s multiple comparisons test was done as post-hoc analysis once the null hypothesis was rejected.
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2

Extracellular Vesicle Cargo Delivery

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The experiments using EVs and antisense oligonucleotides were performed as described previously (32 (link)). AS-oligo or Ctrl-oligo with scrambled sequences (SI Appendix, Table S3) was first infused with DOTAP as described above. EVs isolated from LPS-treated HMDMs were mixed with the DOTAP-oligonucleotide solution and then were applied to recipient HMDMs, followed by incubation for 16 h. To eliminate possible effects of potential endotoxin (LPS) contamination, EVs isolated from LPS-treated HMDMs were incubated with 10 mg/mL polymyxin B (PMB) (Sigma-Aldrich) at 4 °C for 1 h prior to adding to HMDMs.
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3

Quantitative Chromogenic Assay for LPS Neutralization

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The neutralization of LPS by the peptides was assessed using a quantitative Chromogenic End-point Tachypleus Amebocyte Lysate (CE TAL) assay via the QCL-1000 kit (Xiamen, China). A constant concentration of LPS (1.0 EU/mL final concentration; E. coli, O111:B4, Sigma-Aldrich, USA) was incubated with various concentrations of the peptides or polymyxin B (PMB) (0–64 μg/mL final concentration; Sigma-Aldrich, USA) at 37°C for 15 min in the wells of pyrogenic sterile microliters plates. The 100 μL aliquots concentrate of limulus amebocyte lysate reagent was added and incubated at 37°C for 6 min. On the addition of chromogenic substrate, yellow color appeared. The reactions were stopped by adding 25% HCl, and then the absorbances measured at 540 nm (45 (link)).
The level of LPS in the plasma were detected using QCL-1000 kit (Xiamen, China) according to the manufacturer's instructions.
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4

Hsp70 Modulates Ovarian TAM Activation

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Cryopreserved primary ascTAM derived from different ovarian cancer patients were cultured in ascites (pool of 10 different patients) for 6 days followed by overnight starvation in RPMI1680 medium supplemented with 1 mM sodium pyruvate (Sigma Aldrich). Cells were treated with 1 μg/ml recombinant human Hsp70 protein (rhHsp70, low endotoxin; Enzo Life Sciences, Lörrach, Germany). A control (Ctrllow) containing 0.005 ng/ml LPS from E. coli (Sigma Aldrich) corresponding to the endotoxin level of the rhHSP70 (indicated by the manufacturer) was included. To further address the potential effect of endotoxin contaminations of rhHSP70, TAM were pre‐incubated with 10 μg/ml polymyxin B (PMB, Sigma Aldrich) for 2 h prior to stimulation.
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5

Modulating Immune Responses with LPS and Rv2145c

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For heat-denaturation, LPS or Rv2145c were incubated at 100°C for 1 h. For digestion of proteinase K (PK), LPS or Rv2145c were incubated along with 50 μg/ml soluble PK followed by heating for 20 min at 100°C to deactivate the enzyme, and then prepared stimulant were treated in BMDMs. For pretreatment with polymyxin B (PMB; Sigma), LPS and Rv2145c were incubated in medium containing 50 μg/ml of PMB for 1 h at room temperature. After 24 h, cytokine levels in the supernatant were analyzed by sandwich ELISA.
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6

B Cell Proliferation Assays

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Cell proliferation was analyzed by CFSE dilution assay or BrdU incorporation. For CFSE dilution assay, B cells were incubated with 1 µM CFSE (eBioscience) for 10 min at room temperature, and then washed with medium containing 10% FCS. CFSE-labeled B cells were cultured with ALD-DNA, LPS, E. coli DNA, ALD-DNA plus LPS, or E. coli DNA plus LPS for 3 days. The cells were analyzed using a CyAn ADP analyzer (Beckman-Coulter) and the Modfit software (Verity Software House, Topsham, ME).
For BrdU incorporation, ALD-DNA, anti-CD40 antibody, LPS, or a combination of these stimuli were added to the cultures for 3 days. In some cases, cells were pretreated with 20 µg/ml polymyxin B (PMB, Sigma-Aldrich) for 20 min at 37°C. Cells were harvested after 24-hour incubation with 10 µM BrdU (Roche Diagnostics, Mannheim, Germany). BrdU incorporation was analyzed using Cell proliferation ELISA Kit (Roche Diagnostics) according to the manufacturer's instruction.
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7

LOS Extraction and PmB Administration

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Lipooligosaccharides (LOS) was extracted from E.coli B according to the procedure described by Galanos [7 (link),12 ]. The specific method for the extraction of LOS requires mixture of aqueous phenol, chloroform and petroleum ether. Polymyxin B (PmB) (Sigma-Aldrich Chemie GmbH, Germany) was dissolved in drinking water and given to mice in dose of 29.5 mg/l.Both compounds were added in proper concentrations to in vitro cultures.
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8

Macrophage Inflammatory Pathway Inhibition

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Antibodies against proIL-1β, iNOS, COX-2, NF-κB SN50 cell permeable inhibitory peptide (sc-3060) and pyrrolidine dithiocarbamic acid ammonium salt (PDTC) were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Antibodies against actin, LPS, pharmaceutical inhibitors, N-acetyl cysteine (NAC), polymyxin B (PMB) and dimethyl sulfoxide (DMSO) were obtained from Sigma-Aldrich (St. Louis, MO, USA). PD98059, SB203580, SP600125 and antibodies against phospho-proteins were obtained from Cell Signaling Technology (Beverly, MA, USA). The NF-κB reporter reagent (QUANTI-Blue) and ATP were obtained from InvivoGen (San Diego, CA, USA). ELISA kits were obtained from Affymetrix eBioscience (San Diego, CA, USA). The intracellular ROS indicator was obtained from Molecular Probes (Eugene, OR, USA). The florescent E. coli particles and Pierce Limulus Amebocyte Lysate (LAL) Chromogenic Endotoxin Quantitation Kit were obtained from Thermo Fisher Scientific (Waltham, MA, USA). M-CSF was obtained from Peprotech (London, UK). Lipid IVa was obtained from MyBioSource (San Diego, CA, USA).
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9

Boswellia and Antibiotic Combination Assay

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The natural boswellic acids are commercially available as Bioswellix (BOSW) (Interpharma, Prague, Czech Republic), containing acetyl-β-boswellic and acetyl-11-keto-β-boswellic acid (min. 35% w/w). The representatives of currently used antibiotics, erythromycin (ERM) and polymyxin B (PMB), were purchased from Sigma-Aldrich, Prague, Czech Republic. BOSW was dissolved in 100% dimethylsulfoxide (DMSO, Penta, Prague, Czech Republic) to a 1% maximum final concentration of DMSO in culture medium (control samples with 1% DMSO were included in all assays). Each of the antibiotics were dissolved in the appropriate growth medium.
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10

In Vitro Antibiotic Susceptibility of Pseudomonas aeruginosa

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The antibiotics chosen for this in vitro study were based on those commonly used in United Kingdom clinical practice, namely the bactericidal antibiotics ciprofloxacin (CIP, Sigma–Aldrich), cefuroxime 0.5% (w/v) (CXM, Hampshire Hospitals NHS), polymyxin B (PMB, Sigma–Aldrich), gentamicin (GEN, Sigma–Aldrich), ofloxacin (0.3% w/v) (OFX, Allergan), levofloxacin (0.5% w/v) (LVX, Santen) and the bacteriostatic antibiotic chloramphenicol 0.5% (w/v) (CHL, Bausch and Lomb). A broth dilution assay was done to determine PAO1 susceptibility to each antibiotic. Various concentrations of antibiotic (0.01, 0.1, 1, 10, 50, 100, and 200 μg/mL) were added to equal volumes of LB broth medium with various concentrations of bacteria (∼105, ∼106 and ∼107 Colony Forming Units (CFU)/mL). Absorbance (Optical Density (OD) λ600 nm) as a measure of bacterial growth was assessed hourly up to 9 h and then at 24 h of incubation at 37°C with shaking (200 rpm). Comparison of the 24 h OD readings for bacterial growth with and without antibiotics was used to calculate the lowest concentration of antibiotic that completely reduced OD growth by 100% and the concentration of antibiotic that reduced OD growth by 50%.
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