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Sybr green pcr kit

Manufactured by Enzynomics

The SYBR Green PCR kit is a reagent system designed for quantitative real-time PCR (qPCR) analysis. The kit contains the necessary components, including SYBR Green dye, for the amplification and detection of DNA sequences.

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14 protocols using sybr green pcr kit

1

RNA Isolation and Quantification by RT-qPCR

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Total RNA was isolated using TRIzol reagent (Invitrogen Life Technologies), and 1 μg of RNA was used for reverse transcription reaction using TOPscript RT DryMIX (Enzynomics, Daejeon, South Korea). Quantification of mRNA levels was done using SYBR Green PCR kit (Enzynomics, Daejeon, South Korea). Relative expression levels of the indicated genes were compared with that of 18S rRNA, using the 2−ΔΔct method. The primers used are shown in Supplementary Table 1.
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2

Quantitative Real-Time PCR Analysis of Aortic Gene Expression

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Total RNA from the aorta tissue and cells was isolated with TriZol reagent (Invitrogen Life Technologies, Waltham, MA, USA), and 1 μg RNA was used for the reverse transcription (RT) reaction using TOPscript RT DryMIX (Enzynomics, Daejeon, South Korea). The mRNA amounts were determined using the SYBR Green PCR kit (Enzynomics, Daejeon, South Korea). All the data were normalized to the glyceraldehyde 3-phosphate dehydrogenase (GAPDH) expression using the 2-ΔΔct method. The PCR primers used in this study are shown in Table 1 and Table 2.
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3

Quantitative RT-PCR Analysis of Gene Expression

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TRIzol reagent (Sigma-Aldrich, USA) was used to extract the total RNA from tissues and cells. Next, reverse transcription of RNA samples was performed to synthesize cDNA using the TaqMan MicroRNA Reverse Transcription Kit (Sigma-Aldrich, USA), according to the manufacturer’s instructions. For PCR amplification, a Light Cycler instrument (Bio-Rad, Hercules, USA) was used to prepare the reaction system, followed by detection using the SYBR Green PCR kit (Enzynomics, Korea) and SYBR Premix Ex Taq II kit (Takara, USA). Relative expression was calculated using the 2−ΔΔCt method, and normalized to glyceraldehyde‐3-phosphate dehydrogenase (GAPDH) and uracil 6 [19 (link)]. Primer sequences are listed in Table 1.

The sequences of the primers in this study

Primer
Sequences
miR-361-3pForward: 5’-UCCCCCAGGUGUGAUUCUGAUUU-3’
Reverse: 5’-GCAAATCAGAATCACACCTG-3’
miR-3940-3pForward: 5’-CTCAAGGACCACCGCATC-3’
Reverse: 5’-ATCTGCAAGGGACAGCACAG-3’
BBOX1-AS1Forward: 5’-TGTGTGTTTCCTGAGGCCTC-3’
Reverse: 5’-CGCCTCTCTTGGAACACCTT-3’
LAMC2Forward: 5’-GCCTTTTGGCACCTGTATTC-3’
Reverse: 5’-CAGGATTCTCATCCCCTGAA-3’
BaxForward: 5’-GGTTGCCCTCTTCTACTTT-3’
Reverse: 5’-AGCCACCCTGGTCTTG-3’
Bcl-2Forward: 5’-ACTTTGCAGAGATGTCCAGT-3’
Reverse: 5’-CGGTTCAGGTACTCAGCAT-3’
GAPDHForward: 5’-CCATGTTCGTCATGGGTGTG-3’
Reverse: 5’-GGTGCTAAGCAGTTGGTGGTG-3’
U6Forward: 5’-CGCTTCGGCAGCACATATACTA-3’
Reverse: 5’-TATGGAACGCTTCACGAATTTGC-3’
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4

Quantification of HDAC mRNA Expression

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Total RNA was extracted using TRIzol reagent (Invitrogen Life Technologies, Waltham, MA, USA), and 1 μg of RNA was used for the reverse transcription reaction with TOPscript RT DryMIX (Enzynomics, Daejeon, South Korea). Quantification of mRNA was determined using a SYBR Green PCR kit (Enzynomics). Relative expression levels of the indicated genes were compared with GAPDH expression using the 2−ΔΔct method 17. PCR was performed using the following primers: for HDAC1, sense, 5′‐ACGAGTCCTATGAGGCCATTT‐3′, and antisense, 5′‐CACTTGGCGTGTCCTTTGATA‐3′; for HDAC2, sense, 5′‐CATAAAGCCACTGCCGAAGAA‐3′, and antisense, 5′‐TCCATCAAACGCTGGACAATC‐3′; for HDAC3, sense, 5′‐GGTGTCCTTCCACAAATACGG‐3′, and antisense, 5′‐GGCTGGAAAAGGTGCTTGTAA‐3′; for HDAC8, sense, 5′‐AGTGGGAATTGGCAAGTGTC‐3′, and antisense, 5′‐CCAGCACATAATCAGGACCA‐3′; for GAPDH, sense, 5′‐GAAGGTGAAGGTCGGAGTCA‐3′, and antisense, 5′‐GACAAGCTTCCCGTTCTCAG‐3′.
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5

Aortic Tissue RNA Extraction and Quantification

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Total RNA from aortic tissue was isolated with TRIzol reagent (Invitrogen Life Technologies), and 1 μg of RNA was used for the reverse transcription reaction with TOPscript RT DryMIX (Enzynomics, South Korea). Quantification of mRNA levels was performed with the SYBR Green PCR kit (Enzynomics, South Korea). The PCR primers used in this study are shown in Table S1.
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6

Heart tissue RNA isolation and analysis

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Total RNA from heart tissue was isolated with TRIzol reagent (Invitrogen Life Technologies), and 1 μg of RNA was used for the reverse transcription reaction with TOPscript RT DryMIX (Enzynomics, South Korea). Quantification of mRNA levels was done with the SYBR Green PCR kit (Enzynomics, South Korea). The PCR primers used in this study are shown in Supplementary Table 1.
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7

Quantifying Heart Tissue mRNA Levels

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Total RNA was isolated from heart tissue with TRIzol reagent (Invitrogen/Life Technologies, Carlsbad, CA, USA), and 1 μg was reverse transcribed with TOPscript RT DryMIX (Enzynomics, Daejeon, South Korea). mRNA levels were then quantified using a SYBR Green PCR kit (Enzynomics). The PCR primers used in this study are given in Table 1.
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8

Cardiac RNA Expression Quantification

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Total RNA was isolated from heart tissues with TRIzol reagent (Invitrogen/Life Technologies, Carlsbad, CA, United States) and 1 μg was reverse transcribed with TOPscript RT DryMIX (Enzynomics, Daejeon, South Korea). mRNA levels were then quantified using a SYBR Green PCR kit (Enzynomics) using the 2−∆∆Ct method. The PCR primers used in this study are listed in Table 1.
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9

Cardiac Tissue RNA Extraction and qRT-PCR Analysis

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Total RNA was extracted from the cardiac tissues using TRIzol reagent (Invitrogen), according to the manufacturer's instructions. To quantify the RNA concentration, the absorbance of the sample was measured at 260 nm using an ACTGene spectrophotometer (ASP‐2680). The isolated RNA was reverse transcribed into complementary DNA (cDNA) using TOPscript RT DryMIX (Enzynomics). The SYBR green PCR kit (Enzynomics) and specific primers were used to conduct qRT‐PCR analysis. The relative mRNA levels were calculated using the 2−ΔΔCt method. The primers used in the qRT‐PCR analysis are shown in Table 1.
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10

Cardiac Tissue RNA Extraction and qRT-PCR

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Total RNA was extracted from the cardiac tissues using TRIzol reagent (Invitrogen, Carlsbad, CA, USA). The isolated RNA (1 μg) was reverse‐transcribed into complementary DNA (cDNA) using TOPscript RT DryMIX (Enzynomics, Daejeon, South Korea). The PCR primers used in this study are shown in Table 1. qRT‐PCR analysis was performed using a 7500 Real‐Time PCR system with the SYBR Green PCR kit (Enzynomics). The expression levels of the target gene were normalized to those of Gapdh (housekeeping gene).
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