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18 protocols using β naphthoflavone

1

Cell Culture and Treatment Assays

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β-Naphthoflavone (BNF), DMSO, catalase, ubiquinol, ADP, sodium succinate, NADH, cytochrome C, lauryl maltoside, oligomycin, 2,4-dinitrophenol (DNP), rotenone, antimycin, CH223191, proadifen, and resveratrol were obtained from Sigma Chemical Co. (St Louis, MO). ROS probes 2′,7′–dichlorofluorescin diacetate (DCFDA) and Amplex Red reagents were purchased from Abcam (Cambridge, MA) and Invitrogen, (Carlsbad, CA), respectively. Rat C6 glioma and COS cells were purchased from American Type Culture Collection (ATCC) (Manassas, VA) and grown in DMEM/F12 or MDM2 media obtained from Invitrogen, (Carlsbad, CA). In all cases, cells were grown in culture medium supplemented with 10% fetal bovine serum, 1% penicillin-streptomycin at 5% CO2, and 95% air (v/v), at 37°C in the incubator. In some cases, cells were also treated for 24–48 hrs with BNF dissolved in dimethylsulfoxide (DMSO; 25–50 μM) in the presence or absence of resveratrol (10 μM), Mito-CP (2 μM), AHR inhibitor CH223191 (25 μM), and CYP inhibitor proadifen (5 μM), whereas the control cells were treated with vehicle alone.
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2

In Vitro Xenobiotic Metabolism Protocol

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5-Pregnen-3β-ol-20-one-16α-carbonitrile (PCN), phenobarbital (PB), β-naphthoflavone (βNF), rifampicin (RIF), 1,4-Bis-[2-(3,5-dichloropyridyloxy)]benzene,3,32,5,52-tetrachloro-1,4-bis(pyridyloxy)benzene (TCPOBOP), ethoxyquin (EQ), corn oil (CO), dl-dithiothreitol (DTT), and iodoacetamide (IAA) were purchased from Sigma (Dorset, UK). 2,3,7,8-tetrachloro-p-dioxin (TCDD) was purchased from Toronto Research Chemicals (Toronto, Canada). Trypsin Gold was purchased from Promega (Madison, WI).
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3

Analytical Standards for Polycyclic Aromatic Hydrocarbons

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Benzo[b]fluoranthene (BbF, CAS 205-99-2), benzo[k]fluoranthene (BkF, CAS 207-08-9), benzo[a]pyrene (BaP, CAS 50-32-8), indeno[1,2,3-cd]pyrene (IcdP, CAS 193-39-5), nitric acid (HNO3, CAS 7697-37-2), hydrochloric acid (HCl, CAS 7647-01-0), hydrofluoric acid (HF, CAS 7664-39-3), and perchloric acid (HClO4, CAS 7601-90-3) were purchased from Wako Pure Chemical Industries, Ltd. (Osaka, Japan). Fluoranthene (FR, CAS 206-44-0) and pyrene (PY, CAS 129-00-0) were obtained from Nacalai Tesque Inc. (Kyoto, Japan). Benz[a]anthracene (BaA, CAS 56-55-3), dibenz[a,h]anthracene (DahA, CAS 53-70-3), 1-nitropyrene (CAS 5522-43-0), and 2-acetylaminofluorene (CAS 53-96-3) were purchased from Tokyo Chemical Industry Co., Ltd. (Tokyo, Japan). Chrysene (CHR, CAS 218-01-9), benzo[ghi]perylene (BghiP, CAS 191-24-2), phenobarbital (CAS 50-06-6), and β-naphthoflavone (CAS 6051-87-2) were purchased from Sigma-Aldrich Co. LLC (St. Louis, MO, USA). Quartz filters were obtained from Pall Life Sciences (Port Washington, NY, USA).
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4

Conditional Genetic Mouse Models

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All experiments were performed following the UK Home Office guidelines. All mice were maintained under non-barrier conditions and given a standard diet and water ad libitum. The following mouse strains were used: VilCreER (ref. 25 (link)), Lgr5CreER (ref. 26 (link)), AhCreER (ref. 27 (link)), R26R-LSL-tdTomato (tdTomfl) (ref. 28 (link)), Apcfl (ref. 29 (link)), Catnblox(ex3) (ref. 30 (link)), BrafV600 E (ref. 31 (link)), PTENf l (ref. 32 (link)). The Lgr5CreERApcfl/fl and VilCreERApcfl/+ mice were on a C57/B6 background (backcrossed ≥10 generations). The Porcupine inhibitor LGK974 (also referred to as WNT974) was administered in a concentration of 5 mg/kg BID (oral) in a vehicle of 0.5% Tween-80/0.5% methylcellulose. AhCreER mice were induced with 1 mg β-naphthoflavone (Sigma) and 0.15 mg tamoxifen (Sigma) IP. VilCreER and Lgr5CreER mice were induced with tamoxifen (Sigma) IP at the concentrations indicated throughout the manuscript.
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5

Cytochrome P450 enzyme assay protocol

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Acenaphthenol, benzyloxyresorufin, bicinchoninic acid (BCA) assay kit, cytochrome c, NADH, NADPH, NADP+, 7-ethoxyresorufine, menadione, 7-methoxyresorufine, β-naphthoflavone, p-nitrophenyl sulfate, resorufin, R-sulforaphane, 3′-phosphoadenosin-5′-phosphate, and UDP-glucuronic acid were purchased from Sigma-Aldrich (Prague, Czech Republic). Midazolam was obtained from Toronto Research Chemicals (North York, ON, Canada). All other chemicals used were of HPLC or analytical grade. For real-time Polymerase Chain Reaction (PCR) analyses, ProtoScript® II Reverse Transcriptase was purchased from NEB (Ipswich, UK), TriReagent from Biotech (Prague, Czech Republic), and the qPCRCore kit for SYBR Green I from Eurogentec (Seraing, Belgium).
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6

Enzyme Inhibition Characterization

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The reagents used were of the highest commercial quality available. Pyrazole, β-naphthoflavone (BNF), α-naphthoflavone (ANF), cadmium chloride, methanol, clotrimazole, orphenadrine, p-nitrophenol (PNP), chlorzoxazone, quinine, 7-methoxyresorufin (MRF), 7-hydroxycoumarin, 7-benzyloxyquinoline (BQ), 7-pentoxyresorufin (PRF), resorufin, phenobarbital, and sulfaphenazole were purchased from Sigma-Aldrich (St. Louis, MO). The P450 substrates and inhibitors, 3-cyano-7-ethoxycoumarin (CEC); 3-[2-(N,N-diethyl-N-methylammonium)ethyl]-7-methoxy-4-methylcoumarin (AMMC), 7-hydroxyquinoline, 3-cyano-7-hydroxycoumarin (CHC), and 3-[2-(diethylamino)ethyl]-7-hydroxy-4-methylcoumarin hydrochloride (AHMC) were purchased from BD Gentest (Woburn, MA).
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7

Genetic Mouse Model of Intestinal Cancer

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Animals were maintained on an outbred background, housed in a standard facility and all experimental procedures were performed in accordance with institutional animal care and ARRIVE guidelines in compliance with UK Home Office regulations. In brief, mice were maintained in conventional open top cages on dust free bedding (IPS Ltd) under a 12 hr light cycle, with RM3(E) diet (Special Diet Services UK) provided for nutritional support. To enrich the environment, sunflower seeds (at weaning only, LBS Ltd), nestlets (IPS Ltd), disposable envirotubes (IPS Ltd) and small chewsticks (Labdiet–IPS Ltd) were provided. Mice carrying the targeted Lect2 allele were kindly supplied by Dr Satoshi Yamagoe [5 (link)]. Experimental mice were genotyped as previously described for the targeted Lect2 allele [5 (link)], Apc allele [10 (link)], the ApcMin/+ allele [39 (link)], the Rosa26R allele [40 (link)] and the AhCre transgene [11 (link)]. Cre activity was induced in control and experimental mice by 3 consecutive intraperitoneal (i.p.) injections of 80 mg/kg β-naphthoflavone (Sigma, UK) in 24 h. Mixed sex control (litter mates) and experimental mice were used for timepoint (N > 4) or survival (N > 15) experiments. Prior to proliferation analysis selected animals were injected with 100 μg/kg Bromo-deoxyuridine (Sigma, UK) and culled at indicated time points after labelling.
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8

Standardized Extraction of Citrus Flavonoids

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Pericarpium Citri Reticulatae was purchased from a local herbal market. It was authenticated by Professor Xin-feng Gao. A voucher specimen was deposited in Herbaruim of Chengdu Institute of Biology, No. CIBI0064257.
Nobiletin and Tangeretin were purchased from Chengdu Must Bio-technology Co., LTD (China) and indentified in our laboratory for qualitative and quantitative analysis. β-naphthoflavone, polydiallyldimethylammonium chloride (PDDA), β-nicotinamide adenine dinucleotide phosphate hydrate (NADP), glucose-6-phosphate, yeast glucose-6-phosphate dehydrogenase, 4-nitrophenol (PNP) and 4-nitrocatechol (PNC) were purchased from Sigma (MO, USA). HPLC grade acetonitrile was purchased from Fisher Scientific (Fisher, Fair Lawn, USA). Deionized water was purified by a Milli-Q water system (Millipore Corp., Bedford, MA, USA). Tetraethyl orthosilicate (TEOS) was purchased from TCI (Tokyo, Japan). Other chemicals and solvents were of analytical reagent grade and were obtained from Chengdu Chemical Factory (Chengdu, China).
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9

Moringa Leaf Isothiocyanate Purification

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Acetonitrile, 2,2′-azobis(2-methylpropionamidine) dihydrochloride (AAPH), 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT), fluorescein sodium salt, Folin–Ciocalteu phenol reagent, gallic acid, n-hexane, methanol, methyl acetate, β-naphthoflavone (BNF), phosphate-buffered saline (PBS) 10× concentrate, l-sulforaphane (SF), and trolox [(±)-6-hydroxy-2,5,7,8-tetramethylchromane-2-carboxylic acid, 97%] were purchased from Sigma-Aldrich (St. Louis, MO, USA). Fetal bovine serum and α-minimum essential medium (MEM) were purchased from Invitrogen (Carlsbad, CA, USA). All solvents were of analytical grade. Water used in the experiments was purified using a Millipore water purification system with a minimum resistivity of 18.2 MΩ·cm (Bedford, MA, USA).
Compounds 1 and 4 were previously purified in our laboratory from a methanolic extract of fresh moringa leaves by HPLC as described by Waterman et al.8 (link) The chemical purity of isolated ITCs was confirmed by LC-MS and 1H NMR analyses.8 (link)
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10

Benzo[a]pyrene Metabolism Assay

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Benzo[a]pyrene (BaP), fluoranthene (FL), β-naphthoflavone (BNF), ethoxyresorufin, protease inhibitor, magnesium sulfate (MgSO4), potassium chloride (KCl), Tris-HCl, ethylenediaminetetraacetic acid (EDTA), NADPH, NADH, dithiothreitol (DTT), antimycin A, rotenone, carbonyl cyanide-4-(trifluoromethoxy)phenylhydrazone (FCCP), and dimethyl sulfoxide (DMSO) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Corn oil and sucrose were purchased from VWR International (Radnor, PA, USA). HEPES was purchased from Acros Organics (Thermo Fisher Scientific, Waltham, MA, USA). Tris-base was purchased from Omni Pur (EMD Millipore, Darmstadt, Germany). BaP (1 mg/mL) and FL (10 mg/mL) stocks were prepared in DMSO. BNF solutions were prepared in Corn oil.
Atlantic Wood Industries sediment was previously collected and processed in order to extract and characterize an aqueous solution containing a complex PAH mixture, hereafter known as Atlantic Wood sediment extract (AWSE) which was used during experimentation. For complete collection and extraction methods and analytical characterization, see Clark et al. (2013) (link).
A schematic of all of the methods described below can be found in Figure 1. The Duke University Institutional Animal Care and Use Committee approved all of the F. heteroclitus care, handling, and techniques used during this work (Protocol # A184-13-07).
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