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12 protocols using bm blue pod

1

Quantification of IL-17 Cytokine Binding

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The target proteins human IL-17A (R&D Systems), human IL-17B (Peprotech), human IL-17C (R&D Systems), human IL-17D (Peprotech), human IL-17E (Peprotech), human IL-17F (AbD Serotec), mouse IL-17A (R&D Systems), rat IL-17A (Akron Biotech), canine IL-17A (R&D Systems), human IL-6 (R&D Systems), human TNF-α (Piercenet), ovalbumin (Sigma), bovine serum albumin (BSA, Sigma) cynomolgus IL-17A (produced in-house), extra domain-B of fibronectin (25 (link)) were coated onto MaxiSorp® plates (Nunc) at a concentration of 10 μg/ml. After blocking of residual binding sites with 2% milk in PBS (v/w, Rapilait, Migros, Switzerland), 2C1 monomer was incubated at 80 nm with the antibody 9E10 (Roche Applied Science, 3 μg/ml) in 2% milk in PBS. After washing, the wells were incubated with goat anti-mouse IgG in 2% milk in PBS (1:1000, Sigma, HRP-conjugated). After washing, BM Blue POD (Roche Applied Science) was added as substrate for color development. This reaction was stopped after 5 min with 1 m sulfuric acid (Sigma). Binding to human IL-17C was determined in a separate experiment, indicated by the dashed line (Fig. 2D). For each condition, the reference-subtracted absorbance was calculated by A450A650 (reference wavelength) using a SpectraMax® M5e Microplate Reader (Molecular Devices). The data were imported into Excel (Microsoft), and the average of the duplicates was calculated.
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2

IL-17A Receptor Binding Inhibition Assay

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All four 2C1-Fc fusion proteins were tested in ELISA competition experiments to determine their capabilities to block the interaction between IL-17A and its receptor. Maxisorp plates (Nunc) were coated with commercially available IL-17R-Fc fusion (R&D Systems) overnight at a concentration of 0.6 μg/ml. After blocking with 1% BSA in PBS, different concentrations of the Fc fusions were pre-incubated with 2.5 nm of biotinylated IL-17A (R&D Systems; biotinylated in-house with NHS-PEG4-biotin according to the manufacturer's instructions (Pierce)); and added to the wells. After washing, the wells were incubated with streptavidin-HRP conjugate (R&D Systems) 1:200 diluted in 1% BSA/PBS. After washing, BM Blue POD (Roche Applied Science) was added as substrate for color development. This reaction was stopped after 5 min with 1 m sulfuric acid (Sigma). For each condition, the reference-subtracted absorbance was calculated by A450A650 (reference wavelength) using a SpectraMax® M5e Microplate Reader (Molecular Devices). IC50 values were calculated using Prism software (version 5).
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3

Quantification of Soluble IL-6 Receptor in Mice

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For the detection of soluble sIL-6R in sera of mice, the samples were diluted 1:15 in 1% BSA–PBS. The ELISA was performed as described67 (link). In brief, microtiter plates (Greiner Microlon) were coated with anti-murine IL-6-R pAB AF1830 (0.8 μg ml−1; R&D Systems) in PBS. After blocking, 100 μl aliquots of cell lysates or culture supernatants were added. IL-6R bound to the plate was detected by biotinylated goat anti-mouse IL-6-R pAB BAF1830 (working concentration, 0.2 μg ml−1; R&D Systems) followed by streptavidin–horseradish peroxidase (R&D Systems). The enzymatic reaction was performed with soluble peroxidase substrate (BM blue POD from Roche) at 37 °C and the absorbance was read at 450 nm on a SLT Rainbow plate reader (Tecan). For the detection of murine IL-6 in sera of mice, the samples were diluted 1:3 with 1% BSA–PBS.
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4

PF4-Dependent Platelet Factor 4 Assay

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The assay was run according to the protocol from Petrucci and co-workers [20 ] with slight modifications. All the steps were conducted at RT. Briefly, microtiter plates (Maxisorp 96well, Nunc #442404) were coated with human recombinant PF4 (10 μg/ml, ProSpec-Tany TechnoGene, Rehovot, Israel) in phosphate buffered saline (PBS) for 2h followed by the addition of either vehicle, heparin (0.002–200 μg/ml, Sigma-Aldrich, Darmstadt, Germany) or ONs (0.001–3 μM). After an overnight incubation, the plates were washed 3x with 0.1% Tween-20 and blocked with 3% BSA in PBS for 2 h. After washing with 0.1% Tween-20 plates were incubated with KKO antibody (0.1 μg/ml in 0.005% Tween 20, ThermoFisher Scientific, Waltham, MA, USA) for 1h. The plates were washed with 0.1% Tween-20 and further incubated for 1 h with the HRP conjugated goat anti-mouse IgG antibody (1:3000 dilution in 0.005% Tween-20, Bethyl Laboratories). Plates were washed with 0.1% Tween-20 and incubated with the HRP substrate BM Blue POD (100 μl/well, Roche Diagnostics GmbH) and further incubated until color development (10–30 min). The reaction was stopped by the addition of stop solution (1N H2SO4) and absorbance was detected at 450nm on a plate reader (EnSpire, Perkin Elmer).
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5

Quantification of Murine and Human sIL-6R

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For the detection of murine sIL-6R in murine sera the Mouse IL-6R alpha DuoSet ELISA (R&D systems, Minneapolis, USA) was performed according to the user instructions by addition of 1:10 diluted sera. Levels of human sIL-6R in cell culture supernatant was analyzed using the DuoSet Human IL-6Rα ELISA kit (R&D systems, Minneapolis, USA) following the user instructions with slight adaptations. ELISA plates were coated with 50 µl capture antibody overnight, washed, and 50 µl of undiluted cell culture supernatant was added. Following, the samples were incubated with 50 µl of detection antibody before the enzymatic reaction was started using streptavidin–horseradish peroxidase and the peroxidase substrate BM blue POD (Roche, Mannheim, Germany). The reaction was stopped using 1.8 M sulfuric acid and the absorbance was read at 450 nm on a Tecan Spectra Rainbow plate reader (Tecan, Crailsheim, Germany).
All experiments were performed in accordance with relevant guidelines and regulations and approved by the responsible committee in Erlangen (Amt für Veterinärwesen und Gesundheitlichen Verbraucherschutz, approval #TS-6/12).
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6

Quantification of Soluble IL-6 Receptor

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The amount of sIL-6R in the supernatant was detected using the DuoSet Human IL-6Rα ELISA kit (R&D systems, Minneapolis, USA). The ELISA was performed according to the supplier’s instructions, except for the adaption of the used volumes. Fifty microliters of capture antibody, detection antibody, and undiluted samples were used as well as 60 μl of substrate solution and stop solution. Streptavidin–horseradish peroxidase (R&D Systems, Minneapolis, USA) and peroxidase substrate BM blue POD (Roche, Basel, Switzerland) were used for the enzymatic reaction, which was stopped by addition of 2 N H2SO4. The absorbance was measured at 450 nm on FLUOstar Omega (BMG labtech, Offenburg, Germany).
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7

ELISA for Soluble and Full-Length Human IL-6R

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The ELISA which specifically detects soluble as well as full length human IL-6R was described previously38 (link), and performed with streptavidin-horseradish peroxidase (R&D Systems, Minneapolis, MN, USA) and the peroxidase substrate BM blue POD (Roche, Mannheim, Germany). The enzymatic reaction was stopped by addition of 1.8 M sulfuric acid and the absorbance read at 450 nm on a Tecan rainbow reader (Tecan, Crailsheim, Germany).
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8

Quantifying Total and Distinct sIL-6R Levels

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The sandwich ELISA, which detects sIL-6R as well as ds-sIL-6R (4-11/Baf227 antibodies) and can be used to quantify total sIL-6R serum levels, was described previously [21 (link), 31 (link)]. To specifically detect ds-sIL-6R (either recombinant or in human serum), a similar approach was used (ds6R/Baf227). Both sandwich ELISAs were performed with streptavidin-horseradish peroxidase (R&D Systems, Minneapolis, Minnesota, US) and the peroxidase substrate BM blue POD (Roche, Mannheim, Germany). The enzymatic reaction was stopped by addition of 1.8 M sulfuric acid, and the absorbance read at 450 nm on a Tecan rainbow reader (Tecan, Crailsheim, Germany).
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9

Quantification of IL-6 and sIL-6R in Serum and Cell Culture

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For the detection of IL-6 in serum from control patients and sepsis patients and in cell culture supernatants the Human IL-6 ELISA kit from Immunotools (Friesoythe, Germany; Cat.-No. 31670069) was used and for the detection of sIL-6R the DuoSet Human IL-6Rα ELISA kit from R&D systems (Minneapolis, MN, USA; Cat.-No. DY227) was used. Both ELISAs were performed according to the manufacturer’s instructions. For the detection of sIL-6R in sera the samples were diluted 1:100 in blocking buffer, cell culture supernatants were not diluted. For the detection of IL-6 both sera and supernatants were used undiluted. Streptavidin-horseradish peroxidase (R&D Systems, Minneapolis, MN, USA) and the peroxidase substrate BM blue POD (Roche, Mannheim, Germany) were used for the enzymatic reaction which was stopped by addition of 1.8 M sulfuric acid. The absorbance was read at 450 nm on a Tecan rainbow reader (Tecan, Crailsheim, Germany).
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10

Protein Characterization and Binding Assays

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Dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and size-exclusion chromatography Superdex 200 increase 10/300 GL column (Amersham Biosciences, Little Chalfont, UK) were used for characterization of protein size and purity. Analysis of the F8IL9F8 affinity to its cognate antigen was performed by Surface Plasmon Resonance (BIAcore X100, GE Healthcare, Arlington Heights, IL, USA). Samples were injected as serial-dilution (from 2000 nM to 7.8 nM) on a fibronectin 11A12 domain coated CM5 chip (GE Healthcare). ELISA was used to confirm the binding of KSFIL9KSF to hen egg lysozyme. Briefly, hen egg lysozyme (Sigma, Darmstadt, Germany) was coated overnight at a concentration of 3 mg/mL on Maxisorp plates (ThermoFisher Scientific, Waltham, MA, USA). Captured KSFIL9KSF (triplicate of serial dilutions from 1000 nM to 31.3 nM) was detected with Protein A-HRP (GE Healthcare) using BM-Blue POD (Roche, Basel, Switzerland) as the substrate for horseradish peroxidase. Absorbance was measured at 450 nm vs 620 nm using a microplate reader (Ledetect 96, Dynamica Scientific, Portsmouth, UK). Results are expressed as an average of triplicate measurements.
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