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11 protocols using pe mouse anti human cd24

1

Breast Cancer Cell Immunophenotyping

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PE mouse anti-human CD24, APC mouse anti-human CD44, PE mouse IgG2a κ Isotypecontrol and APC mouse IgG2b κ Isotype Control were purchased from BD Pharmingen (San Diego, CA). Cells were resuspended at 1×106cells per 100 μl of sorting buffer (1×PBS containing 0.5% bovine serum albumin) and incubated with pre-conjugated CD44-APC and CD24-PE primary antibodies for 10 min at 4°C. Three control groups were established for the first sorting: (1) cells labeled with the isotype antibodies of the above two antibodies, (2) cells labeled with the anti-CD44-APC antibody and the isotype control antibody for CD24, and (3) cells labeled with the anti-CD24-PE antibody and the isotype control antibody for CD44. The cells were washed in 1×PBS and centrifuged at 800g for 2 min. For flow cytometric analysis, cells were resuspended in sorting buffer after incubation with the primary antibodies.
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2

Flow Cytometric Analysis of Stem Cell Markers

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The growing cells cultured in 100 mm dishes were washed with 1× PBS, trypsinized, centrifuged, and resuspended in 2% FBS in Hank’s balanced salt solution (HBSS). The viable cell number was counted using an automatic cell counter (trypan blue exclusion), and the cell density was adjusted to 1 × 106 cells/100 μL. For CD24 and CD44 staining, 20 μL of antibodies (anti-CD24, anti-CD44 and PE-mouse IgG isotype control and APC-mouse IgG isotype control) were added to 100 μL of cell suspension and incubated at 4 °C for 30 min per the manufacturer’s protocol. However, for ABCG2 staining, 5 μL of APC Mouse Anti-Human CD338 and APC-mouse-IgG isotype control were added to 100 μL cell suspension and incubated at 4 °C for 30 min, according to the manufacturer’s instructions. After incubation, the cells were washed three times with HBSS and centrifuged at 2000 rpm for 3 min. Then, the cells were resuspended in 300 μL 1× PBS containing 1 μg/mL DAPI and were passed through tube filters to avoid cell aggregation. Finally, the cells were analyzed using flow cytometry. PE mouse anti-human CD24, APC mouse anti-human CD44, PE mouse IgG2α, κ isotype control (555574), APC mouse IgG2α, and κ isotype control antibodies were purchased from BD Bioscience (San Jose, CA, USA), and anti-mouse IgG1 isotype control (MAB002) was purchased from R & D Systems, Inc. (Minneapolis, MN, USA).
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3

Characterization and Sorting of Tumor Spheres

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For flow cytometry analyses and cell sorting tumor spheres were dissociated as single cells, washed and incubated with the appropriate dilution of control or specific antibody. Antibodies used were V450 Mouse Anti-Human CD44 (561292), PE-Cy7 Mouse Anti-Human CD45 (557748), PE Mouse Anti- Human CD146 (550315), PE-Mouse Anti-Human CD24 (555428), FITC Mouse Anti-Human CD90 (561969), FITC-Mouse Anti-Human EpCAM (347197), APC-Mouse Anti-Human CD10 (332777), (all from BD Bioscience Bedford, Franklin Lakes, NJ) and Mouse monoclonal antibody [5D3] to Cytokeratin 8 + 18 (Abcam Cambridge,UK, 17139). After 45 min incubation, cells were washed. Analysis was performed using a FACS Canto flow cytometer (BD Biosciences). Cell Sorting was performed by FACS ARIA cytometer equipped with three lasers (488, 633, 407 nm) (BD Biosciences). All the cytofluorimetric acquisitions were analyzed by BD FACSDiva Software version 6.1.3 (BD Biosciences). For the sorting, cells were incubated with antibodies for 1 h then washed in PBS. Antibodies were used following manufacturing protocol indication for sorting experiment. TO-PRO3 (Thermo Fisher) dye was used for viability evaluation and used following manufacturing protocol indication. All the cytofluorimetric acquisitions were analyzed by BD FACSDiva Software version 6.1.3 (BD Biosciences).
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4

FACS Sorting of MCF-7 Breast Cancer Cells

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Cells were collected and suspended in PBS, labeled with FITC mouse anti-human CD44 and PE mouse anti-human CD24 (BD Pharmingen TM), with 5 μl of antibody per one million cells in a final volume of 300 μl. A total of about 1.0× 106 cells were incubated with these two antibodies for 0.5 h at 4°C in the dark. Unbound antibody was washed off and the cells were analyzed on a BD FACS Calibur within 1 h of staining. Gating was established using the isotype controls FITC-labeled mouse IgG2a and PE-labeled mouse IgG2b (BD Pharmingen TM).
We used FACS to sort every passage of MCF-7 cells into two phenotypically distinct populations: CD44+/CD24- and all other phenotypes. The labeling method and condition were the same as described for the flow cytometric analysis.
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5

CD44 and CD24 Expression Analysis

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Trypsinized cells were incubated with anti-human CD44 antibodies (allophycocyanin) (BD Pharmingen, APC Mouse Anti-Human CD44, 559942, USA), anti-human CD24 antibodies (phycoerythrin) (BD Pharmingen, and PE Mouse anti-human CD24, 555428, USA) on days 1, 3, 5 and 7. Next, cells were resuspended in FACS buffer (1% bovine serum albumin (Sigma-Aldrich, St. Louis, MO, USA) in PBS) and then aquired using a FACSAria flow cytometer (Becton Dickinson, San Jose, California, USA). Results were analyzed with FlowJo Data Analysis Software (FlowJo LLC, OR, USA).
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6

Identification of CD44+CD24- Cells

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The identification of CD44+CD24-cells was performed using APC mouse anti-human CD44 (BD Bioscience, CA, USA, Cat: 559942) and PE mouse anti-human CD24 (BD Bioscience, Cat: 555428) antibodies. The APC mouse IgG2b K Isotype control (BD Bioscience, Cat: 555745) and the PE mouse IgG2a K Isotype control (BD Bioscience, Cat: 555574) were used as the isotype controls. Cells were analyzed using an Accuri C6 Flow Cytometer.
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7

Cell Characterization by Flow Cytometry

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The cell-encapsulated gels were fixed with 4% paraformaldehyde, washed with PBS, and incubated in oxidative degradation solution (0.1M CoCl2 in 20% hydrogen peroxide) for 2 h [30 ]. After gel degradation, the suspension was centrifuged and the cells were washed with cold PBS containing 5% BSA. Next, the cells were incubated with phycoerythrin (PE) mouse anti-human CD24 and fluorescein isothiocyanate (FITC) mouse anti-human CD44 (BD Biosciences, Franklin Lakes, NJ) in PBS with 5% BSA for 45 min on ice in dark. Then, the cells were washed with cold PBS with 5% BSA and analyzed by a flow cytometer (FC500, Beckman Coulter, Brea, CA).
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8

Isolation and Characterization of Cancer Stem Cells

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Cells were cultured in media containing EGF and bFGF in ultra-low attachment 6-well plate. After 5 days, suspension cells were collected, washed and counted.
For cell surface markers detection, 1 × 106 cells were taken out and washed with FACS buffer (1 × PBS, 2% FBS, 0.1% NaN3), and resuspended in 100 μl FACS buffer. PE Mouse anti-Human CD24 (BD Biosciences), PE-Cy™7 Mouse anti-Human CD44 (BD Biosciences) were added to the cell suspensions, and incubated for 15 min in dark at room temperature. Cells were washed by FACS buffer again and detected by the Accuri C6 Flow cytometer.
ALDH enzyme activities were also detected by flow cytometry. Following the manufacturer's instructions of ALDEFLUOR™ kit (STEMCELL Technologies), cells were collected and resuspended in ALDEFLUOR assay buffer. Then, cells were evenly divided into two tubes which contained ALDEFLOUR reagent or ALDEFLOUR plus DEAB (ALDH enzyme inhibitor). After incubation in 37 °C water baths for 40 min, cells were analyzed by the Accuri C6 Flow cytometer.
All the results of flow cytometry were further analyzed by FlowJo V10 software.
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9

Stem Cell Marker Profiling Protocol

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For better stem cell marker profiling, two fluorochrome-conjugated monoclonal antibodies were used: APC mouse anti-human CD 44 (BD Biosciences) and PE mouse anti-human CD 24 (BD Biosciences). Antibodies were added to the cell suspension previously stained with the ALDEFLUOR kit, as recommended by the manufacturer, incubated at 4°C in the dark for 20 min, centrifuged (250 × g, 5 min), and suspended in PBS. Labeled cells were analyzed using the BD FACS Aria III (BD Biosciences). In order to diminish the spectral overlap signal between ALDEFLUOR and CD24-PE, the single-labeled, double-labeled and unlabeled samples were analyzed and data was compensated using Kaluza software. The spectral overlapping signal was subtracted from the total fluorescence detected in every channel.
The sorting gates were established using a negative control of ALDEFLUOR-stained cells incubated with DEAB. Sorted CSC (ALDHhigh) were used directly for Western blotting, qRT-PCR analysis and 3D-soft agar assay.
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10

Mammosphere Characterization by Flow Cytometry

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Mammospheres were grown, treated with C3, collected and dissociated into single cells as before. Then, the cells were washed in cold fluorescence-activated cell sorting buffer (FACS, 2% FBS, 0.05% sodium azide in DPBS), counted and 1 × 106 cell/mL FACS was prepared. The antibodies used to study the expression of CD44 and CD24 markers were as follows: APC mouse anti-human CD44 (BD Pharmingen™, BD Biosciences, CA, USA), APC mouse IgG2b, κ isotype control (BD Pharmingen™, BD Biosciences, CA, USA), PE mouse anti-human CD24 (BD Pharmingen™, BD Biosciences, CA, USA) and PE mouse IGg2a, κ isotype control (BD Pharmingen™, BD Biosciences, CA, USA). APC-Cy7 (100 µL per tube) was used to select for live cells. Incubation with antibodies or isotype controls was for 30 min in darkness at 4 °C. Cells were washed twice in 1 mL FACS buffer and resuspended in 100 µL of FACS buffer. Expression of ALDH was studied using ALDEFLUOR™ Kit (Stem Cell Technologies), based on the manufacturer’s protocol. An aliquot of 1 × 105 cells/tube was prepared on ice for 30 min staining with 20 µL antibody or isotype control. Prior to analysis, the cells were washed twice in 1 mL FACS buffer and resuspended in 100 µL of FACS buffer. The experiments were performed in triplicate and the results are expressed as mean ± SD.
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