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16 protocols using donkey serum

1

Immunohistochemical and Immunocytochemical Analysis of GFAP, TREK-1, and MOR in Rodent Brain Tissues

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For immunohistochemistry, animals were deeply anesthetized using 2% avertin and perfused with 0.1 M phosphate-buffered saline (PBS), followed by 4% paraformaldehyde. Brains were post-fixed in 4% paraformaldehyde at 4°C for 24 h and 30% sucrose 4°C for 48 h. Brains were then cut in coronal sections of 30 μm on a cryosection. The sections were blocked in 0.1 M PBS containing 0.3% Triton X-100 (Sigma) and 2% donkey serum (Genetex) for 30 min at room temperature. Primary antibody used are as follow: chicken anti-GFAP (1:500, ab5541, Millipore), rabbit anti-TREK-1 (1:100, APC-047, Alomone Labs), and rabbit anti-MOR (1:200, sc-15310, Santa Cruz Biotechnology). The brain samples with primary antibodies were incubated overnight at 4°C. Then, the sections were washed three times in 0.1 M PBS and incubated in proper secondary antibodies from the Jackson Laboratory for 1.5 h. After three rinses in 0.1 M PBS and DAPI staining at 1:3,000 (PIERCE), the sections were mounted on polysine microscopic slide glass (Thermo Scientific).
For immunocytochemistry, we fixed the cultured astrocytes with 4% paraformaldehyde at 4°C for 10 min. After washing with 0.1 M PBS three times, we performed immunocytochemistry according to the same procedures as immunohistochemistry.
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2

Immunohistochemical Analysis of Mouse Brain

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Adult mice were deeply anesthetized with 2% avertin and perfused with 0.1 M PBS followed by 4% paraformaldehyde. Brains were postfixed in 4% paraformaldehyde at 4°C for 24 hr and 30% sucrose at 4°C for 48 hr. Brains were then cut into 30 μm coronal cryosections. Sections were blocked in 0.1 M PBS containing 0.3% Triton X-100 (Sigma) and 2% Donkey Serum (GeneTex) for 30 min at room temperature. Primary antibody was then applied at the appropriate dilution and incubated overnight at 4°C. Sections were then washed three times in 0.1 M PBS and incubated in secondary antibody for 2 h. After three rinses in 0.1 M PBS and DAPI staining at 1:1000 (Pierce), the sections were mounted on polysine microscopic glass slides (Thermo Scientific). Images were acquired using a Nikon A1R confocal microscope.
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3

Immunohistochemical Analysis of Dopaminergic Neurons

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Saline- and MPTP-injected mice were perfused with perfusion solution and postfixated with 4% paraformaldehyde for 1 day. The perfusion solution was made with NaCl, NaNO3, and heparin (Sigma-Aldrich) in dissolving distilled water. The brains stored in 30% sucrose for cryoprotection were cut to a thickness of 30 μm. Dissection of the brain to obtain the SNpc and striatum regions was performed as previously described [17 (link)]. Brain slices were fixed with tissue stock solution and rinsed three times in phosphate-buffered saline (PBS pH 7.4). 0.3% Triton X-100 and 2% donkey serum (GeneTex, Irvine, CA, USA) in PBS were used for blocking for 90 min, then brain slices were incubated with primary antibodies against anti-tyrosine hydroxylase (Millipore, AB152) at 4°C overnight. For immunohistochemistry, brain slices were incubated with rabbit secondary antibodies (Dako EnVision+ System-HRP, USA) for 90 min, and then, reacting with DAB+ substrate buffer. After mounting by fluorescent mounting medium (Dako North America Inc., Santa Barbara, CA, USA) on cover slides, immunofluorescent images were acquired using an Olympus™ microscope (Olympus, Hachioji-shi, Tokyo, Japan).
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4

Multimodal Imaging of Brain Cell Types

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Animals were deeply anesthetized using isoflurane and perfused with 0.9% saline, followed by 4% paraformaldehyde. Brains were post-fixed in 4% paraformaldehyde at 4°C for 24 h and dehydrated in 30% sucrose at 4°C for 24 h. Brains were then cut in a coronal section of 30 μm on a cryosection. Sections were blocked in 0.1 M PBS containing 0.3% Triton X-100 (Sigma) and 2% donkey serum (Genetex) and 2% goat serum (abcam) for 1.5 h at room temperature. The primary antibodies used were as follows: rabbit anti-S100β (1:200, ab52642, abcam), guineapig anti-GABA (1:500, ab175, abcam), and guineapig anti-PV (1:200, 195 004, Synaptic systems). Samples with primary antibodies were incubated overnight at 4°C. The samples were then washed three times in 0.1 M PBS and incubated with appropriate secondary antibodies (1:500) from Jackson Laboratory for 1.5 h. After three rinses in 0.1 M PBS, the samples were mounted on a Polysine microscopic slide glass (Thermo Scientific). Images were acquired using a Zeiss LSM 900 microscope.
The super-resolution images were obtained using the Elyra 7 super-resolution microscope and processed using ZEISS Zen 3.0 software. The laser intensities are as follows: 405 nm, 17%; 488 nm, 7%; 561 nm, 7%; 642 nm, 5%.
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5

Immunohistochemical Analysis of Mouse Brain

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Animals were deeply anesthetized using 2% avertin and perfused with 0.1M PBS, followed by 4% paraformaldehyde. Brains were post-fixed in 4% paraformaldehyde at 4℃ for 24 hr and 30% sucrose 4℃ for 48 hr. Brains were then cut in coronal sections of 30 µm on a cryosection. Sections were blocked in 0.1 M PBS containing 0.3% Triton X-100 (Sigma) and 2% donkey serum (Genetex) for 30 min at room temperature. Primary antibody used are as follow: chicken anti-GFAP (1:500, ab5541, Millipore), rabbit anti-S100β (1:200, NB110-57478, Novus), rabbit anti-MOR (1:200, sc-15310, Santa Cruz Biotechnology), rabbit anti-MOR (1:200, RA10104, Neuromics), goat anti-TH (1:500, ab101853, Abcam), mouse anti-NeuN (1:1,000, MAB377, Millipore), and mouse anti-vGAT (1:200, 131011, Synaptic systems). The brain samples with primary antibodies were incubated overnight at 4℃. Then, the sections were washed three times in 0.1 M PBS and incubated in proper secondary antibodies from the Jackson Laboratory for 1.5 hr. After three rinses in 0.1 M PBS and DAPI staining at 1:3000 (PIERCE), the sections were mounted on polysine microscopic slide glass (Thermo Scientific). Images were acquired using a Nikon A1R confocal microscope. We repeated each experiment at least three times.
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6

Immunofluorescence imaging of GFP in ganglia

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Animals were sacrificed by CO2 inhalation, and then perfused with PBS and then 4% paraformaldehyde (PFA). Following perfusion, geniculate and vagal ganglia were dissected and placed in 30% sucrose for cryoprotection overnight at 4°C. Tissues were then embedded in OCT, frozen, and then sectioned on a cryostat at 20 μm. Tissue sections were mounted on Superfrost microscope slides and allowed to sit for 1 h. Slides were then briefly rinsed in PBS, and then blocked in 10% Donkey serum (Genetex Inc catalog no. NC0952420) in PBS with 0.3% Triton X100 for 1 hour at room temperature. Tissue was stained overnight at 4°C for anti-GFP primary (Aves labs catalog no. NC9510598, 1:2000 dilution) then overnight at 4°C with Alexafluor 488 anti-chicken secondary (Jackson Immuno Research Catalog no. NC0215979, 1:1000 dilution). Tissue was then rinsed and mounted with Vectashield anti-fade mounting media (Vector labs H-1000-10). Images were obtained on a Zeiss LSM 710 confocal microscope using a Zeiss Plan-Neofluar 10x objective and the Zen imaging software.
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7

Quantifying Astrocyte TREK1 Expression

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Cultured astrocytes on coverslips were fixed in 4% paraformaldehyde (PFA) at room temperature for 20 min and permeabilized with phosphate buffered saline (PBS) containing 0.5% NP-40 for 10 min. Non-specific binding caused by the antibody was prevented by incubation for 2 h in 3% donkey serum (GeneTex). Thereafter, cells were incubated at 4 °C overnight in donkey serum-containing anti-TREK1 (Alomone Labs, # APC-047, 1: 200) and anti-β-COP (Santa Cruz Biotechnology; sc-393615, 1: 200). After washing the next day, Dye Light 488, 549 conjugated secondary antibodies (Jackson Labs, 1:500) were treated and incubated at room temperature for 1 h. After that, the cells were mounted, and observed under a Nikon A1 confocal microscope to determine the surface expression of TREK1 according to the decrease in β-COP expression. Anti-TREK1 was used in cultured astrocytes transfected with β-COP shRNA in the same manner as above. Before permeation, plasma membrane staining was performed with WGA-647 conjugate (1: 200; W32466, Thermo) through additional culture at 4 °C for 15 min.
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8

Astrocyte Immunostaining and Imaging

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Primary astrocytes cultured in a 24-well plate were fixed in 4% paraformaldehyde and 0.5% glutaraldehyde (Sigma, G5882-50 ML) for 15 min at room temperature after 13 DIV, and washed with 0.1 M phosphate-buffered saline (PBS) for 5 min. Samples were incubated with 0.1 M PBS containing 0.3% Triton X-100 (Sigma) and 10% donkey serum (Genetex, CA) for 1.5 h to prevent non-specific binding. Cells were incubated with a guinea-pig anti-GABA antibody (ab175; 1:1000; Millipore, MA) and a chicken anti-glial fibrillary acidic protein (GFAP) antibody (ab5541; 1:1000; Millipore) overnight at 4℃. After washing with 0.1 M PBS, cells were incubated with a DyLight 488- or 594-conjugated secondary antibody (1:500; Jackson Laboratory, ME) for 2 h at room temperature. After three rinses with 0.1 M PBS and staining with DAPI (1:3000; Thermo Scientific, MA), coverslips were mounted on Polysine microscopic glass slides (Thermo Scientific, MA). Images were acquired using a Nikon A1R confocal microscope.
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9

Neurological Tissue Preparation and Immunohistochemistry

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Animals were deeply anesthetized using 2% avertin and perfused with 0.1M PBS, followed by 4% paraformaldehyde solution. Brains were post-fixed in 4% paraformaldehyde at 4℃ for 24 hrs and dehydrated in 30% sucrose at 4℃ for 48 hrs. Brains were then cut in coronal sections of 30 µm on a cryosection. Sections were blocked in 0.1 M PBS containing 0.3% Triton X-100 (Sigma) and 2% donkey serum (Genetex) for 1 hr at room temperature. Primary antibodies used are as following: chicken anti-GFAP (1:500, ab5541, Millipore), guinea pig anti-GABA (1:200, ab175, Millipore), chicken anti-proBDNF (1:200, ab9042, Millipore, epitope; fusion protein from mouse proBDNF containing only the prodomain region), rabbit anti-BDNF (1:50, sc20981, Santacruz, epitope; recombinant BDNF containing amino acid 130-247 from N-terminus). The brain samples with primary antibodies were incubated overnight at 4℃. Then, the sections were washed three times in 0.1 M PBS and incubated in proper secondary antibodies (1:500) from the Jackson Laboratory for 3 hrs. After three rinses in 0.1 M PBS and DAPI staining at 1:10000 (PIERCE), the sections were mounted on the Polysine microscopic slide glass (Thermo Scientific). Images were acquired using a Nikon A1R confocal microscope.
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10

CREB Immunofluorescence in Mouse Hippocampus

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The test was conducted as described previously61 (link),62 (link). Brains were removed and then placed in 4% paraformaldehyde overnight. The fixed brains were washed with PBS and dehydrated in 5–30% sucrose at 4 °C for 48 h. Each brain (20 μm thick) was sectioned with a cryostat (MICROM HM 525, Walldorf, Germany), then sections were blocked in PBT (0.05% Tween 20 in 1X PBS) containing 0.3% Triton X-100 (Sigma) and 3% donkey serum (Genetex) for one hour at room temperature. The following primary antibodies were used for immunofluorescence: mouse anti-CREB polyclonal antibody (1:500, 35-0900, Invitrogen), and. Brain sections were incubated with the primary antibodies at 4 °C overnight, and washed three times in PBT. Brain sections incubated for 2 h with Alexa Fluor 647-conjugated donkey anti-mouse secondary antibody (1:500, Invitrogen). After the incubated brain sections were washed three times with PBT, the sections were covered with Vectashield HardSet Antifade mounting medium with DAPI (Vector Laboratories, H‐1500) and imaged with a confocal microscope (LSM800; Carl Zeiss). For cell counting, the measurement of the analyzing particles using the Image J software was used to count specifically immuno-stained cells in the hippocampus.
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