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Gapdh clone 6c5

Manufactured by Merck Group
Sourced in United States

GAPDH (clone 6C5) is a lab equipment product manufactured by Merck Group. It is a monoclonal antibody that specifically recognizes the glyceraldehyde-3-phosphate dehydrogenase (GAPDH) protein. GAPDH is a key enzyme involved in the glycolytic pathway, catalyzing the conversion of glyceraldehyde-3-phosphate to 1,3-bisphosphoglycerate.

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12 protocols using gapdh clone 6c5

1

Western Blot Analysis of CCR4-NOT Complex

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Cells were lysed in RIP assay buffer (20 mM Tris-HCl, pH 7.4, 150 mM NaCl, 2 mM EDTA, 1% NP-40, 1% sodium deoxycholate, and 0.05% SDS) containing protease inhibitor cocktail and phosphatase inhibitor cocktail. Equal amounts of each sample were separated by SDS-PAGE and transferred to PVDF membranes (EMD Millipore). Immunoblotting was performed using the following antibodies: anti-CNOT1, CNOT6, CNOT6L, CNOT8, CNOT9, and CNOT10 antibodies described previously (Morita et al., 2007 (link); Chen et al., 2011 (link); Ito et al., 2011 (link)); and commercially obtained anti-CNOT2 (Cell Signaling Technology), CNOT3 (clone 4B8; Abnova), CNOT7 (clone 2F6; Abnova), and GAPDH (clone 6C5; EMD Millipore) antibodies.
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2

Immunoblot Analysis of Cellular Proteins

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For immunoblot analysis, RIPA buffer supplemented with protease and phosphatase inhibitors (Invitrogen) was used to lyse treated cells. The supernatant was collected by centrifugation for 20 minutes at 12,000 (g). Protein lysates were separated using SDS-PAGE gels (10%). The gels were transferred to a PVDF membrane for 2 hours at 60V (4°C). The membranes were probed using the following primary antibodies overnight at 4°C; GAPDH (clone 6C5, dilution 1:1,000) from EMD Millipore, MAGEA3 (clone 1A10, dilution 1:1,000) from Origene, TRIM28 from Abcam (polyclonal, dilution 1:1000), β-Actin from cell signaling (clone 13E5, dilution 1:1000), Survivin from cell signaling (clone 6E4, dilution 1;1000), and Cleaved PARP (ASP214, #9541, dilution 1:1,000) from Cell Signaling. After washing with PBST, membranes were incubated with the following secondary antibodies diluted in PBST with 5% BSA; anti-mouse from Cell Signaling (dilution 1:5,000) and anti-rabbit from Cell Signaling (dilution 1:5,000). Membranes were visualized with Amersham ECL prime western blotting detection reagent (GE Healthcare, RPN2236) on an Amersham imager 600 system.
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3

Immunoblotting Assay for AQP2 Detection

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AQP2 Abs against the 20-aa residue segment just Nterminal from the polyphosphorylated region of rat AQP2 (CLKGLEPDTDWEEREVRRRQ) (31, 32) were used to detect the total amount of AQP2. AQP2-pS261 Ab was from Novus Biologicals (Littleton, CO, USA). p38-MAPK, phospho-p38-MAPK (Thr180/Tyr182), and ubiquitin (P4D1) Abs were purchased from Cell Signaling Technology. mAb against glyceraldehyde-3-phosphate dehydrogenase (GAPDH; clone 6C5) was purchased from EMD Millipore (Billerica, MA, USA). Alexa Fluor 488 Abs were purchased from Thermo Fisher Scientific (Waltham, MA, USA).
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4

Western Blotting Protein Expression Analysis

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Western blotting was performed with a sodium dodecyl sulfate-polyacrylamide gel electrophoresis system as previously described [9 (link), 10 (link)]. Immunoblotting was performed following incubation of samples with CUL4A (clone EPR3198, 1:10000, Abcam, Cambridge, MA), LC3B (catalog no. NB100–2220, polyclonal, 1:2000, Novus Biologicals, Littleton, CO), and glyceraldehyde 3-phosphate dehydrogenase (GAPDH; clone 6C5, 1:10000, Millipore, Burlington, MA) antibodies at 25°C for 2 h. The blots were washed and incubated with a 1:2000 dilution of horseradish peroxidase (HRP)-conjugated secondary antibody (Jackson, West Grove, PA, United States), followed by three washes with TBST (Tris-buffered saline + Tween). Enhanced chemiluminescent HRP substrate (Pierce, Rockford, IL, United States) was used for detection according to manufacturer’s description.
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5

B Cell Activation and Signaling Analysis

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B cells from the spleen and lymph nodes were purified using negative selection with magnetic beads using either a Miltenyi Biotec or Stem Cell Technologies B cell isolation kits. Purified B cells were either left unstimulated or stimulated using a 1:20 dilution of anti-IgD anti-serum (eBioscience, San Diego, CA) or 50 μg/ml anti-IgM (Jackson Immuno-Research). Whole cell lysates were prepared and Western blotted for phosphotyrosine (4G10 antibody, Millipore, Billerica, MA) and GAPDH (clone 6C5, Millipore).
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6

Monoclonal Antibodies for Protein Detection

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Monoclonal mouse antibodies were raised against CXCL9 (clone 49106, R&D Systems, Minneapolis, MN, USA), CXCL10 (clone sc-101500, Santa Cruz Biotechnology, Santa Cruz, CA, USA), CD3 (MRQ-39), CD56 (MRQ-42, Cell Marque, Rocklin, CA, USA), FOXP3 (236A/E7, eBioscience, San Diego, CA, USA), COX-1 (clone COX111, Invitrogen, Camarillo, CA, USA), COX-2 (clone CX229, Cayman Chemicals, Ann Arbor, MI, USA), glyceraldehyde 3-phosphate dehydrogenase (GAPDH, clone 6C5, Millipore, Billerica, MA, USA) and horseradish peroxidase-conjugated goat anti-mouse IgG (Jackson ImmunoResearch, Burlington, ON, USA).
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7

Western Blot Analysis of PLCζ and PAWP in Globozoospermia

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Briefly, approximately 35 µg of protein was run on sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and then transferred to a polyvinylidene fluoride membrane (PVDF, Biorad, USA). The membranes were blocked with skimmed milk (Merck, USA) and polyclonal antiPLCζ antibody (1:32000, Covalab, France), polyclonal anti-PAWP antibody (1:5000, abcam, UK) and monoclonal anti-glyceraldehyde-3-phosphate dehydrogenase (GAPDH), clone 6C5 (1:5000, Millipore, USA), were used as specific primary antibodies. After three times washing, the secondary antibodies, used for PAWP and PLCζ, were horseradish peroxidase (HRP)-conjugated goat anti-mouse IgG and for GAPDH was anti-rabbit IgG (all purchased from Dako, Japan). After three times washing, target proteins band were detected with an Amersham ECL Advance Western Blotting Detection Kit (GE Healthcare, Germany). The fire reader (Uvitec, UK) was used for recording chemiluminescence images. Densitometric analysis of the images was performed by Quantity One Software v 4.6.9 (Bio-Rad, Germany). Results were expressed as mean relative intensity (mean intensity of the patient’s band/mean intensity of fertile bands) (17 (link)). Figure 1 showed Western blot of PLCζ and PAWP in infertile men with globozoospermia (n=4) and fertile men (n=5).
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8

Western Blot Analysis of Cellular Proteins

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Cells were lysed using RIPA buffer and Halt Protease and Phosphatase Inhibitor Cocktail (Cat#78440, Thermo Scientific). Cell lysates were centrifuged at 2000g for 10 min at 4C and supernatant was stored at −80C. Whole cell lysates were quantified using Pierce BCA Protein Assay Kit (Cat#23227, Thermo Scientific). The samples were boiled for 10 min in 4x Laemmli Sample buffer (Cat#1610747, Bio-Rad Laboratories) containing B-mercaptoethanol. SDS Page was performed using Mini-PROTEAN TGX Precast Gels and a Mini-PROTEAN Tetra Cell system (Bio-Rad laboratories). The proteins were transferred to a PVDF membrane (Millipore) and probed with primary antibodies at 1:1000 dilution (CD3ζ Clone-6B10.2: Cat#sc-1239; GAPDH Clone 6C5: Cat. No. sc-32233, Santa Cruz Biotechnology). The blots were developed using Clarity Western ECL Blotting Substrate (Cat#1705060, Bio-Rad Laboratories) and imaged on the Odyssey Fc Imaging System from LI-COR Biosciences and LI-COR Image Studio software version 5.2. Full uncropped blots shown in Source data file for Supplementary Figures.
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9

Antibody-based Detection of AQP2 and Phosphorylation

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Total AQP2 was detected with antibodies (Pre‐C‐tail Ab) against the 20‐amino acid residue segment just N‐terminal from the polyphosphorylated region of rat AQP2 (CLKGLEPDTDWEEREVRRRQ) 12, 13. Alternatively, AQP2 was detected with a specific antibody (C‐tail Ab) raised against a synthetic peptide corresponding to the last 15 C‐terminal amino acids of human AQP2 14. AQP2‐pS256 antibodies were kindly gifted by Peter Deen and described by Trimpert et al. 15. Monoclonal antibody against glyceraldehyde‐3‐phosphate dehydrogenase (GAPDH, clone 6C5) was purchased from Millipore (Millipore Corporation). Secondary goat anti‐rabbit and antimouse‐Alexa488‐conjugated antibodies were from Molecular Probes (Eugene, OR, USA).
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10

Cellular Protein Localization Analysis

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Phenylephrine (SIGMA), MG132 (SIGMA). Sarcomeric Alpha Actinin (EA-53, Abcam), Cardiac Troponin I (Abcam), Gapdh (clone 6C5, Millipore), Myc (D84C12, CST), RNA polymerase II (8WG16, Millipore), Btg2 (custom-made polyclonal antibody by immunizing rabbits, Cyclex), Cnot7 (18W, Santa-Cruz), α-Tubulin (MBL), anti-FLAG (M2, SIGMA), and Alexa 488-and Alexa 568-labeled secondary antibodies (Invitrogen).
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