The largest database of trusted experimental protocols

4 protocols using p histone h2ax

1

Detecting DNA Double Strand Breaks

Check if the same lab product or an alternative is used in the 5 most similar protocols
DNA double strand breaks were detected by both flow cytometry [48 (link)] and Western blotting [35 (link)] as described previously. For flow cytometry, TFB-treated cells were fixed, washed, and incubated at 4 °C for 1 h in 2 μg/mL of p-Histone H2AX (Ser 139) (γH2AX) monoclonal antibody (sc-101696; Santa Cruz Biotechnology, Santa Cruz, CA, USA). After washing, cells were suspended for 1 h in a secondary antibody (Jackson Laboratory, Bar Harbor, ME, USA) for 30 min at room temperature. Finally, the cells were resuspended in 20 μg/mL of PI for flow cytometry analysis (BD Accuri™ C6; Becton-Dickinson).
For Western blotting of γH2AX expression, 30 μg protein lysates were resolved in 10% SDS-PAGE. Except when p-Histone H2AX (Santa Cruz Biotechnology) was chosen for the primary antibody, procedures were the same as those employing Western blotting for apoptosis proteins, mentioned above.
+ Open protocol
+ Expand
2

Protein Expression Analysis in Tissue Lysates

Check if the same lab product or an alternative is used in the 5 most similar protocols
40 μg of cell lysates obtained from ground-frozen tissue or cells were used for assessing protein expression. Primary antibodies used for detection were FOXM1 (1:1000, Abcam, ab207298), MAD2 (1:1000, BD biosciences, 610678), HA (1:1000, Covance, MMS-101R), Cyclin B (1:200, Santa Cruz, SC-245), Cleaved-Caspase 3 (1:1000, Cell signaling, 9661), p-Histone H2AX (1:250, Santa Cruz, SC-517348), CDC20 (1:250, Santa Cruz, SC-13162), Actin (1:3000, Sigma, A2066). Protein band quantification was carried out using ImageJ.
+ Open protocol
+ Expand
3

Antibodies for Western Blotting Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Antibodies for western blotting were purchased from Cell Signaling (Danvers, MA): p-EGFR (Tyr1068) (2234, 1:1000), EGFR (4267, 1:1000), p-MEK1/2 (Ser217/221) (9154, 1:1000), MEK1/2 (8727, 1:1000), p-p44/42 MAPK (Erk1/2) (Thr202/Tyr204) (9101, 1:1000), p44/42 MAPK (Erk1/2) (9102, 1:1000), p-p38 MAPK (Thr180/Tyr182) (9211, 1:1000), p38 MAPK (9212, 1:1000), α-tubulin (2144, 1:2000), vimentin (3390, 1:1000), TACE (3976, 1:1000), Snail (3879, 1:1000), E-cadherin (3195, 1:1000), p-FAK (Tyr397) (3283, 1:1000), FAK (3285, 1:1000), p-STAT3 (Tyr705) (9131, 1:1000), STAT3 (9139, 1:1000), GAPDH (2118, 1:2000), β-actin (3700, 1:2000), p-DNA-PK (68716, 1:1000), DNA-PK (38168, 1:1000), PARP (9532, 1:1000), p-Histone H2A.X (Ser139) (9718, 1:1000), Histone H2A.X (2595, 1:1000), p-Chk2 (Thr68) (2197, 1:1000), Chk2 (2662, 1:1000), p53 (2524, 1:1000), caspase-7 (9492, 1:1000), caspase-3 (14220, 1:1000), AURK-A (14475, 1:1000); Santa Cruz Biotechnology (Dallas, TX): integrin β1/ITGB1 (sc-374429, 1:1000). Selumetinib (AZD6244, MEK1/2 inhibitor), osimertinib (AZD9291, EGFRT790M), M3814 (DNA-PK inhibitor, DNA-PK-I) and ZM-447439 (AURK-A inhibitor, AURK-A-I), MK-4827 (PARP inhibitor, PARP-I), M4076 (ATM inhibitor, ATM-I), M6620 (ATM/ATR inhibitor, benzosertib) and M4344 (ATR inhibitor, ATR-I) were purchased from Selleck Chemicals (Selleckchem).
+ Open protocol
+ Expand
4

Protein Expression Analysis in EC Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein samples from EC cells were collected and western blotting was performed as described previously.33 Antibodies were diluted in accordance with manufacturer's instructions. The primary antibodies used were as follows: NRN1 (Abcam, CO), MMP2, MMP7, MMP9 (Bioworld Technology), cyclin A2, cyclin D1, cyclin E (Proteintech), caspase3, cleaved caspase3, Bcl‐2 (Cell Signaling Technology), mTOR, p‐mTOR (ZhengNeng), PI3K, AKT, p‐AKT (Proteintech), ERK (Proteintech), p‐ERK (Proteintech), p‐histone H2aX (Santa Cruz Biotechnology), ATR (ZhengNeng), p‐ATR (ZhengNeng), CHK1 (ZhengNeng), p‐CHK1 (ZhengNeng), and β‐actin (Beyotime Biotech).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!