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293 freestyle cells

Manufactured by Thermo Fisher Scientific
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The 293 Freestyle cells are a cell line derived from human embryonic kidney cells. They are suspension-adapted and designed for high-density, high-yield protein production in bioreactor-based expression systems.

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28 protocols using 293 freestyle cells

1

Expression of IL-15/IL-15Rα in FreeStyle 293 cells

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IL-15/IL-15Rα protein was transiently transfected and expressed by using FreeStyle 293 cells (GIBCO, Cat#R79007). FreeStyle 293 cells were cultured in Freestyle 293 expression medium (GIBCO, Cat#12338018), supplemented with Ultra Low IgG Fetal Bovine Serum (ultra low immunoglobulins FBS, GIBCO, Cat # 16250078) at a final concentration of 1%. IL-15/IL-15Rα expression plasmids and transfection reagent PEI (Polysciences, Cat#239662) were prepared, the two plasmids of IL-15 and IL-15Rα were co-transfected at a ratio ranging from 1:1 to 9:1, total amount of plasmids was 100 μg/100 ml cells, the ratio of plasmid to PEI was 1:2 by mass. Cell density on the day of transfection was 1 × 106/ml. 1 L of FreeStyle 293 cells were prepared to be transfected. 50 ml of Opti-MEM (GIBCO, Cat # 11058021) medium was mixed with the plasmid, kept still for 5 min and filtered. Another 50 ml of Opti-MEM medium was mixed with PEI, kept still for 5 min and filtered. The plasmid was mixed with PEI and kept still for 15 min. The mixture of plasmid and PEI was slowly added to the cells and cultured in shaking incubator at 130 rpm at 37 °C, 8% CO2. 5 days later, the supernatant was collected by centrifugation for protein purification.
Ref1 molecule was prepared as previously reported23 (link).
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2

Expression and Purification of TIMP-1 Variants

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For expression of full-length human TIMP-1 and TIMP-1 variant proteins, the mammalian protein expression vector pTT-TIMP-1 was used (65 (link)). The TIMP-1 mutant genes were amplified from the corresponding yeast pCHA plasmids using PCR and inserted into the pTT-TIMP-1 vector using HindIII and BamHI restriction enzymes. WT TIMP-1 and TIMP-1 variants were expressed in human embryonic kidney 293-FreeStyle cells (Thermo Fisher Scientific) and purified by ion exchange and size-exclusion chromatography as previously described (21 (link)). TIMP-1 protein concentration was measured using titration against MMP-3cd protein stock of known concentration as previously described (21 (link)). TIMP-1 variant proteins were deglycosylated with peptide:N-glycosidase F (New England Biolabs) according to the manufacturer's protocols to prepare homogenous proteins for crystallization. Deglycosylated TIMP-1 C4 and C6 variant proteins were purified by size-exclusion chromatography using a Superdex-75 column (GE Healthcare) using 50 mM Hepes, pH 6.8, containing 150 mM NaCl equilibration and elution buffer. The highly pure deglycosylated TIMP-1 fractions were combined and concentrated using Amicon Ultra-15 centrifugal filter units with molecular weight cutoff of 10 kDa.
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3

Recombinant Murine Procathepsin K Expression

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Complete open reading frame of murine pro-CtsK (GE Dharmacon) were cloned into pUNO1 (Invivogen) expression vector using AgeI and NheI restriction sites. The sequence of the final plasmid was confirmed by DNA sequencing. Recombinant murine pro-CtsK were expressed in 293-Freestyle cells (ThermoFisher) by transient expression using FectoPRO transfection reagent (Polyplus transfection). Purification of pro-CtsK from culture supernatant was carried out using HiTrap heparin-Sepharose column (GE Healthcare) at pH 7.1 (HEPES buffer). After purification, procathepsin K was >99% pure as judged by silver staining.
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4

SARS-CoV-2 Pseudotype Neutralization Assay

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SARS-CoV-2 pseudotypes were produced by transfection of HEK293T/17 cells and neutralization activity assayed using HeLa cells stably expressing ACE2 (kind gift James E Voss). Small and large scale expression of monoclonal antibodies was performed in HEK293T/17 (ATCC; ATCC® CRL-11268) and 293 Freestyle cells (Thermofisher Scientific), respectively. Infectious virus was grown in Vero-E6 cells (kind gift from Wendy Barclay) and neutralization activity measured using the same cells. Full-length SARS-CoV Spike was expressed on the surface of HEK293T cells (ATCC® CRL-3216). Bacterial transformations were performed with NEB® Stable Competent E. coli.
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5

Murine HMGB1 Protein Expression and Purification

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Expression and purification of full-length murine His-HMGB1 in E. coli were performed as described before (35 (link)). Mutagenesis was performed using a QuikChange site-directed mutagenesis kit (Agilent).
For HMGB1 expression in mammalian cells, the complete open reading frame of murine HMGB1 was cloned into pcDNA3.1(+)-C-6His vector (GenScript). Transfection was performed using FectoPRO transfection reagent (Polyplus-transfection). Recombinant His-HMGB1 was produced in 293 FreeStyle cells (Thermo Fisher Scientific). Purification of His-HMGB1 from 293 FreeStyle cell lysate was carried out using Ni Sepharose 6 Fast Flow gel (GE Healthcare). After purification, His-HMGB1 was 99% pure as judged by silver staining.
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6

SARS-CoV-2 Pseudotype Neutralization Assay

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SARS-CoV-2 and SARS-CoV-1 pseudotypes were produced by transfection of HEK293T/17 cells (ATCC® CRL-11268™) and neutralization activity assayed using HeLa cells stably expressing ACE2 (kind gift from James E Voss). Expression of monoclonal antibodies and Fab fragments was performed in 293 Freestyle cells (Thermofisher Scientific, R79007). Experiments with surface expressed Spike glycoproteins were performed using HEK293T cells (ATCC® CRL-3216™). Bacterial transformations were performed with NEB® Stable Competent E. coli.
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7

SARS-CoV-2 Pseudotype Neutralization Assay

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SARS-CoV-2 pseudotypes were produced by transfection of HEK293T/17 cells and neutralization activity assayed using HeLa cells stably expressing ACE2 (kind gift James E Voss). Small and large scale expression of monoclonal antibodies was performed in HEK293T/17 (ATCC; ATCC® CRL-11268™) and 293 Freestyle cells (Thermofisher Scientific), respectively. Bacterial transformations were performed with NEB® Stable Competent E. coli.
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8

Recombinant Murine Cst-3 Expression

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Complete open reading frame of murine Cst-3 was cloned into pcDNA3.1 (Invivogen) using XhoI and ApaI restriction sites. Recombinant Cst-3 was expressed in 293-Freestyle cells (Thermofisher) by transient expression using FectoPRO transfection reagent (Polyplus transfection). Secreted Cst-3 was analyzed by heparin–Sepharose chromatography as described above.
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9

Antibody Generation and Purification

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Antibodies from QA255 were originally isolated and cloned as described previously [65 (link)]. In brief, paired heavy and light chain DNA clones were co-transfected in equal ratios into 293F cells (293 Freestyle cells; Thermo Fisher; 1x106 cells/1 μg of total DNA) with a 16:1:1 (OptiPRO Serum-Free Medium:293Max:DNA, Thermo Fisher) ratio. Antibodies were harvested after 72 h and purified using Protein G resin in hand-packed, gravity flow columns (Pierce). Antibody concentration was determined using protein absorbance at 280 nM (Nanodrop).
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10

Isolation and Immortalization of Rabies-Neutralizing Memory B Cells

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IgG+ memory B cells were isolated from cryopreserved PBMC using CD22 microbeads (Miltenyi Biotec), followed by depletion of cells carrying IgM, IgD, and IgA by cell sorting, and immortalized with EBV and CpG in multiple replicate wells as previously described (Traggiai et al, 2004). Culture supernatants were tested for their ability to neutralize CVS‐11 RABV pseudotyped virus infection in a micro‐neutralization assay. Positive cultures were collected and expanded. From positive cultures, the VH and VL sequences were retrieved by RT–PCR. RVC20 and RVC58 antibodies were cloned into human IgG1 and Ig kappa or Ig lambda expression vectors (kindly provided by Michel Nussenzweig, Rockefeller University, New York, NY, USA) essentially as described (Tiller et al, 2008). Monoclonal antibodies were produced from EBV‐immortalized B cells or by transient transfection of 293 Freestyle cells (Invitrogen). Supernatants from B cells or transfected cells were collected and IgG were affinity purified by Protein A or Protein G chromatography (GE Healthcare) and desalted against PBS.
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