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5 protocols using fusion fx chemiluminescence imaging system

1

Quantifying Chka Protein Levels in MCF-7 Cells

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Following 72 h of transfection, MCF-7 cell lysates were prepared using ProteoJET™ mammalian cell lysis reagent (Thermo Fisher Scientific, Inc.), according to the manufacturer's protocol. The protein concentration of the cell lysate was determined using Bradford assay reagent (cat. no. 5000006, Bio-Rad Laboratories, Inc.). Protein samples (30 µg) were loaded into the well of 12% SDS-PAGE. Following separation with 12% SDS-PAGE, the proteins were transferred onto a nitrocellulose membrane. The membrane was blocked with 5% (w/v) skimmed milk in TBST buffer for 1 h at room temperature prior to detection with rabbit primary β-actin (dilution, 1:5,000; cat. no. ab8227; Abcam) and Chka (dilution, 1:1,000; cat. no. ab88053; Abcam) antibodies overnight at 4°C. The membrane was washed ≥3 times with TBST (0.1% (v/v) Tween-20 in TBS) buffer prior to incubation with HRP-conjugated secondary goat anti-rabbit IgG antibody (dilution, 1:5,000; cat. no. 12–348; Sigma-Aldrich, Merck KGaA) at room temperature for 1 h. The membrane was then washed three times prior to detection with SuperSignal™ West Femto maximum sensitivity substrate (cat. no. 34094, Thermo Fisher Scientific, Inc.). The signal was visualized using the FUSION FX chemiluminescence imaging system (Vilber Lourmat) and the band intensities were analyzed using ImageJ 1.49b software (National Institutes of Health).
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2

SARS-CoV-2 Antigen Immunoblotting Assay

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SARS-CoV-2 antigens diluted to 0.5 mg/mL were mixed (v/v) with 2X Laemmli Sample Buffer (Bio-Rad, Hercules, CA, USA) before a heating step of 5 min at 95°C. This preparation and a ladder were dispensed in wells shaped in a 5 % polyacrylamide stacking gel. The protein separation was then performed in a 10% polyacrylamide separating gel with a Mini Trans-blot cell device (Bio-Rad) at 160 V for 90 min. After transferring proteins from the gel to a 0.45-μm-pore size nitrocellulose membrane (Bio-Rad) at 100 V and 15°C for 90 min, the membrane was left at 4°C overnight with 5% non-fat milk powder in Tris buffered saline (TBS) with 0.5% Tween 20 (Euromedex, Souffelweyersheim, France). Blocked strips were incubated with sera diluted at 1:50 for 60 min. Three washes of 10 min were performed before a 90-min incubation of the strips with goat peroxidase-conjugated anti-human IgG/IgM/IgA (Jackson ImmunoResearch, Ely, UK) diluted 1:1000. Three washes of 10 min with TBS buffer with 0.5% Tween 20 were made. Strips were put in contact with ECL Western Blotting Substrate (Promega, Madison, WI, USA) and the reaction with secondary antibody peroxydases was revealed with a Fusion Fx chemiluminescence imaging system and analyzed with the Fusion software (Vilber, Marne-la-Vallée, France).
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3

Protein Labeling and Immunoblotting in HEK293 Cells

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After the respective treatments, HEK293 cells were washed with ice-cold phosphate-buffered saline (PBS) containing 20 mM N-ethylmaleimide (NEM) then lysed with 2% CHAPS (in HEPES-buffered saline [HBS], pH 7.4) or RIPA buffer (1% Triton X-100, 0.1% SDS, 0.5% sodium deoxycholate in HBS, pH 7.4) supplemented with 20 mM NEM and protease inhibitors. PNS and lysis buffer-insoluble pellet were collected after centrifugation at 4°C 10,600 × g for 10 min. PNS was denatured for 5 min at 95°C with the addition of 100 mM dithiothreitol and subjected to SDS–PAGE. Following in-gel TMR imaging with Typhoon FLA 9500 (Software Version 1.0) with a 532-nm laser, proteins were transferred to polyvinylidene difluoride (PVDF) membranes using the Trans-Blot Turbo Transfer System (Bio-Rad). Membranes were blocked with 8% (wt/vol) nonfat dry milk (Bio-Rad) in Tris-buffered saline (TBS)-T and stained with primary antibodies diluted in TBS-T followed by HRP–conjugated secondary antibodies or HRP–conjugated Protein A diluted in TBS-T. Membranes were developed using Luminata Forte ECL detection system (Millipore) and signals were captured with FusionFX chemiluminescence imaging system (VILBER). TMR bands were quantified using the ImageQuant TL software (Molecular Dynamics, GE Healthcare).
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4

Western Blot Protein Detection Protocol

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The cells were lysed with cell lysis buffer containing 50 mM Tris pH 7.4, 120 mM NaCl, 5 mM EDTA, 1% Triton-X100, 10% glycerol with a protease inhibitor cocktail, and a phosphatase inhibitor cocktail, and were centrifuged at 15,000× g for 10 min at 4 °C. The resultant supernatant was denatured with 3× Laemmli SDS sample buffer containing 15% 2-mercaptoethanol. The samples were separated by SDS-PAGE and transferred onto polyvinylidene fluoride membranes. The membranes were blocked for 1 h with 5% skim milk or 5% bovine serum albumin (Rab10 phospho-T73 antibody), and then incubated with primary antibodies for 1 h at 22 °C or overnight at 4 °C. After washing 3 times with Tris-buffered saline (TBS) at pH 7.4 containing 0.05% Tween 20, the membranes were incubated with HRP-conjugated secondary antibodies for 1 h at 22 °C, and were again washed three times with TBS-Tween 20. The blots incubated with Immobilon Forte Western HRP substrate (Merck Millipore, Burlington, MA, USA; WBLUF0100) were detected using a FUSION FX chemiluminescence imaging system (VILBER, Paris, France). The blot intensities were quantitated using Image Lab Software Version 6.0.0 (Bio-Rad Laboratories, Hercules, CA, USA).
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5

Western Blot Analysis of Nrf2

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Culture supernatants were concentrated by ultrafiltration (molecular weight cut-off = 3 kDa). Cells were lysed in radio-immunoprecipitation assay buffer, which consisted of 50 mM Tris-HCl, pH 7.5, 150 mM NaCl, 1% (v/v) Nonidet P40, 0.1% (w/v) sodium dodecyl sulfate (SDS), 0.25% (w/v) sodium deoxycholate, 1 mM EDTA, and protease inhibitor cocktail, and incubated on ice for 15 min. After being centrifuged (15,000 g, 4°C, 15 min), supernatants were collected as whole cell lysates. Protein concentrations were measured using a BCA protein assay kit (Takara Bio, Kusatsu, Japan). To analyze Nrf2, cells were lysed directly in SDS-polyacrylamide gel electrophoresis (SDS-PAGE) sample buffer. Proteins were separated by SDS-PAGE in reducing conditions and then transferred to polyvinylidene difluoride membranes. After blocking with phosphate buffered saline (PBS) supplemented with 0.05% (v/v) Tween 20 and 3% (w/v) skim milk, the blot was incubated with a primary antibody, followed by a horseradish peroxidase-conjugated secondary antibody. The blot was analyzed using Chemi-Lumi One Ultra (Nacalai Tesque) and a FUSION FX Chemiluminescence Imaging System (Vilber Lourmat, Collégien, France). To strip the antibodies, the blot was incubated with 2 M glycine-HCl (pH 2.8) for 60 min. After washing, the blot was re-probed with different antibodies.
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