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Versadoc 4000 mp imager

Manufactured by Bio-Rad
Sourced in Germany

The VersaDoc 4000 MP imager is a versatile laboratory imaging system designed for a wide range of applications. It features a 4-megapixel CCD camera and supports multiple imaging modes, including chemiluminescence, fluorescence, and visible light. The imager is capable of capturing high-resolution images and provides flexible options for sample illumination and detection.

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7 protocols using versadoc 4000 mp imager

1

Western Blot Protein Analysis

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Western blot analyses were carried out using crude cell lysates of cell lines or testicular cancer samples heated for 5 min at 95°C in 2x SDS sample buffer (100 mM Tris-HCl, pH 6.8, 4% SDS, 0.2% Bromophenol Blue, 20% glycerol, 200 mM DTT). Proteins were separated in 10% polyacrylamide gel and transferred to Hybond-P membrane (GE Healthcare, UK).
Treatment with primary antibodies listed in Table S1 was followed by the addition of either secondary anti-rabbit IgG HRP-linked antibody (Cell Signaling, USA, #7074S) or secondary anti-mouse IgG HRP-linked antibody (Cell Signaling, USA, #7076S). The membrane was visualized using the Immun-Star HRP Chemiluminescent kit (Bio-Rad, USA) and bands were detected either in VersaDoc MP4000 imager (Bio-Rad, USA) or on X-ray film. Technical duplicates were used to ensure reproducibility.
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2

In Vitro and In Vivo Protein Adsorption on Hydrogels

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For in vitro protein adsorption, hydrogel disks were soaked in FBS for two hours after which the fluid was removed by aspiration. For in vivo protein adsorption, hydrogels were explanted 30 minutes after implantation. In the latter, no excess fluid was visible around the hydrogels. Hydrogels were recovered and placed in 50mM ammonium bicarbonate for two hours and vortexed to remove adsorbed proteins. The samples were subsequently boiled, but no additional proteins were detected. The resulting solutions were snap frozen in liquid nitrogen and stored at −80°C until further processing. Total protein mass was quantified using the bicinchoninic acid (BCA) assay kit (Pierce) per manufacturer’s instructions Protein (two micrograms/lane) from each hydrogel formulation was run on a 4–20% Tris glycine polyacrylamide gel (BioRad, Hercules, CA). Protein bands were imaged via silver staining (SilverXpress®, Invitrogen) per manufacturer using a VersaDoc MP 4000 Imager (BioRad).
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3

Protein Adsorption on PEG Hydrogels

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Equilibrium swollen PEG hydrogels 6mm in diameter were placed in 96-well tissue culture polystyrene (TCPS) plates. Hydrogels and 96-well TCPS plates without hydrogel, which is referred to as the reference substrate, were exposed to 100% fetal bovine serum (FBS) for 2 hours, consistent with our previously established protocols [44 (link),45 (link)]. The FBS then was aspirated. Hydrogels were placed in 5% (w/v) sodium dodecyl sulfate (SDS) solution and SDS solution was added directly to the wells in TCPS reference substrate. After two hours, the solution was collected, flash frozen in liquid nitrogen, and stored at −70°C. Total protein mass quantified (bicinchoninic acid, BCA assay, Pierce) was normalized to exposed surface area. Protein (4 μg/lane, n=4) was loaded onto a 4–20% tris glycine polyacrylamide gel (BioRad). Protein bands were imaged by silver staining (Pierce) and a VersaDoc MP 4000 Imager (BioRad).
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4

Characterization of PrV Glycoprotein Variants

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RK13 cells were (co-)transfected with plasmids expressing the indicated gH variants with or without the gL-expression plasmid using Lipofectamine 2000 (Thermo Fisher Scientific), and pEGFP-N1 (Clontech) served as negative control. For virus characterization, RK13 cells were infected with the different mutants and PrV-Ka at a MOI of 3. Transfected and infected cells were harvested one day later, washed with phosphate-buffered saline (PBS), and lyzed in sample buffer (0.13M Tris-HCl, pH 6.8; 4% SDS; 20% glycerol; 0.01% bromophenol blue; 10% 2-mercaptoethanol). After boiling for 3 min, proteins were separated on SDS-10% or 12% polyacrylamide gels and transferred to nitrocellulose. Membranes were blocked with 5% skimmed milk in tris-buffered saline with 0.1% Tween-20 (TBS-T), and probed with monospecific PrV antisera diluted in TBS-T (anti-gH 1:15.000, anti-gL 1:1.000, anti-UL38 1:100.000) [7 (link),9 (link)] or an anti-tubulin monoclonal antibody (Sigma-Aldrich, Taufkirchen, Germany) as loading control. Bound antibody was detected after incubation with horseradish peroxidase-conjugated α-rabbit or α-mouse IgG (Invitrogen, Waltham, MA, USA) using the Clarity Western ECL Substrate (BioRad). Signals were recorded with a Versa DOC 4000 MP imager (BioRad, Feldkirchen, Germany).
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5

Analysis of Herpes Virus Glycoprotein B Mutants

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RK13 cells were harvested 24 h after transfection with 600 ng of the expression plasmids encoding wild-type gB or the different N-glycosylation mutants using lipofectamine 2000 (Thermo Fisher Scientific, Darmstadt, Germany). Cells were lysed, and protein samples were separated by discontinuous sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS–PAGE) and transferred to nitrocellulose membranes. Membranes were incubated with monoclonal PrV gB antibodies (c15-b1 or A20-c26 at 1:10 dilution) [18 (link),47 (link)] and peroxidase-conjugated secondary antibody (Dianova, Hamburg, Germany). Clarity Western ECL substrate (Bio-Rad Laboratories, Feldkirchen, Germany) and a VersaDoc 4000 MP imager (Bio-Rad Laboratories, Feldkirchen, Germany) were used for detection.
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6

Immunoblotting of Cellular Proteins

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Infected or transfected cells were harvested after 18 h and lysed, and protein samples were separated by discontinuous sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) under reducing conditions and transferred to a nitrocellulose membrane. Membranes were incubated with appropriate antibodies. Peroxidase-conjugated secondary antibody (Jackson ImmunoResearch) was detected with Clarity Western ECL substrate (Bio-Rad) and recorded with a VersaDoc 4000 MP imager (Bio-Rad) using the Quantity One software (version 4.6.9).
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7

Western Blot Analysis of VAPA and VAPB

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Lysates of parental, single and double knockout RK13 as well as of Vero and HeLa cells were separated in sodium dodecyl sulfate (SDS)-10% polyacrylamide gels. Proteins were transferred to nitrocellulose membranes and blocked with 6% skimmed milk. Parallel blots were incubated with the polyclonal rabbit sera specific for VAPA (1:2.500; Invitrogen # PA5-22188; raised against a synthetic peptide corresponding to a region within amino acids 29 and 122 of human VAPA ID#Q9P0L0; ThermoFisherScientific), VAPB (1:5.000; Invitrogen # PA5-53023; corresponding to amino acids 105-216 of human VAPB ID#O95292; ThermoFisherScientific), or with a monoclonal α-tubulin antibody (1:10.000; Sigma, Taufkirchen, Germany). Bound antibodies were detected after incubation with peroxidase-conjugated anti-rabbit or anti-mouse antibodies (Dianova, Hamburg, Germany) using the Clarity Western ECL substrate (Bio-Rad Laboratories, Feldkirchen, Germany). Signals were recorded with a VersaDoc 4000 MP imager (Bio-Rad Laboratories) using the Quantity One software (version 4.6.9).
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