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9 protocols using sodium hydrogen carbonate

1

Synthesis of Functional Polymers

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Acetone and ethanol were purchased from Carl Roth. Acetonitrile, 2,2-dimethoxypropane, p-toluenesulfonic acid, tetrahydrofuran and sodium chloride (98%) were purchased from Sigma Aldrich (Taufkirchen, Germany). Acryloyl chloride (96%) was purchased from Merck (Darmstadt, Germany). Azobis(isobutyronitril) (98%), triethylamine and trifluoroacetic acid were purchased from Acros Organics (Geel, Belgium). Dichlormethane, diethylether, ethyl acetate, methanol, hexane and dimethylformamide were purchased from VWR Prolabo (Darmstadt, Germany). Dopamine hydrochloride (99.96%) and glycinamide hydrochloride were purchased from BLD Pharmatech (Kaiserslautern, Germany). Hydroquinone was purchased from J.T. Baker (Phillipsburg, NJ, USA). Potassium carbonate, lithium hydroxide and magnesium sulfate were purchased from Fisher Scientific. Methyl trifluoroacetate was purchased from Fluorochem (Hadfield, UK). N-[3-(Dimethylamino)propyl]acrylamide (98%) and N-(2-hydroxyethyl)acrylamide (98%) were purchased from TCI (Tokyo, Japan). Sodium hydrogencarbonate, hydrochloric acid (37%) and toluene were purchased from VWR Chemicals.
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2

Evaluation of Antioxidant and Digestive Enzyme Inhibition Activities

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ABTS (2,2′-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid)), Trolox (6-hydroxyl-2,5,7,8-tetramethylchroman-2-carboxylic acid), DPPH (2,2-diphenyl-1-picrylhydrazyl), TFA (trifluoroacetic acid), gallic acid, Folin–Ciocalteu reagent (FC), pepsin from porcine gastric mucosa-lyophilized powder, α-amylase and pancreatin from porcine pancreas, heat-stable α-amylase solution, protease, amyloglucosidase solution, 2-(N-Morpholino) ethanesulfonic acid (MES), and Tris (hydroxymethyl) aminomethane (TRIS) were purchased from Sigma-Aldrich Co. (St. Louis, MO, USA). Technical grades of methanol (MeOH) (>98.5%), ethanol (C2H5OH) (93%), sodium hydroxide (NaOH) (97%), sodium chloride (NaCl) (97%), potassium persulfate (K2S2O8) (100%), sodium carbonate (Na2CO3) (>99%), nitric acid (HNO3) (>99%), sulfuric acid (H2SO4) (>97%), hydrochloric acid (HCl) (37.2% w/w), petroleum ether (C6H14) (30–60 °C, A.R), Kjeldahl tablet (CuH10O9S), potassium chloride (KCl) (> 99%), sodium hydrogen carbonate (NaHCO3) (>99%), sodium chloride (NaCl) (97%), magnesium chloride (MgCl2) (99%), ammonium chloride (NH4Cl) (100%), calcium chloride (CaCl2) (>93%), monopotassium phosphate (KH2PO4), and indicators (tashiro and phenolphthalein) were purchased from VWR International (Leuven, Belgium). Inductively coupled plasma (ICP) multi-element standard solution IV was procured from Merck KGak (Darmstadt, Germany).
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3

Extraction and Analysis of Bioactive Compounds

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HPLC grade methanol, acetone, and methyl tert-butyl ether were acquired from Fisher Scientific Scharlau Chemie (Loughborough, UK). Sodium chloride was purchased from POCH S.A. (Sowińskiego, Poland). Ultrapure water was obtained with a Milli-Q system (Millipore Ibérica, Madrid, Spain). Ammonium carbonate, acetonitrile, hexane, ethanol (HPLC grade), magnesium chloride hexahydrate, acetic acid, and ammonium acetate were acquired from Scharlab (Sentmenat, Spain). Butyl hydroxytoluene (BHT) was purchased from Scharlau Chemie S.A. (Barcelona, Spain). Calcium chloride dihydrate was obtained from Merck (Darmstadt, Germany). Sodium hydrogen carbonate and potassium dihydrogen phosphate were acquired from VWR (Llinars del Vallès, Spain). Potassium chloride was obtained from Panreac (Castellar del Vallès, Spain). Digestive enzymes (porcine pepsin, porcine bile extract, porcine pancreatin, and porcine lipase) were acquired from Sigma-Aldrich (Darmstadt, Germany).
Caffeic acid, ferulic acid, and p-coumaric acid commercial patterns were obtained from Sigma-Aldrich (St. Louis, MO, USA). B-carotene standard was acquired from Carote-Nature (Ostermundigen, Switzerland), and α-carotene was acquired from Supelco-Merck (Darmstadt, Germany).
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4

Antibacterial Cellulose Paper Testing

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Norfloxacin, 95%, was purchased from abcr GmbH (Karlsruhe, Germany). Commercially available, cellulose-based paper (Soft & Sicher, dm-drogerie markt GmbH + Co. KG, Karlsruhe, Germany) was utilised as the paper matrix. Sucrose, peptone, beef extract, sodium chloride and potassium chloride were acquired from Carl Roth GmbH + Co. KG (Karlsruhe, Germany). Agar was purchased from Sigma-Aldrich Pty Ltd. (Darmstadt, Germany). Magnesium sulfate heptahydrate, magnesium chloride hexahydrate, calcium chloride dihydrate, sodium hydrogen carbonate, di-potassium hydrogen phosphate and di-sodium hydrogen phosphate were acquired from VWR International GmbH (Darmstadt, Germany). Aliivibrio fischeri (A. fischeri) bacterial strain (ATCC 7744/ NCMB 1281) was obtained from Dr. G. Schuchardt® (Göttingen, Germany). Purified water was freshly obtained from a PURELAB Flex 2 (ELGA LabWater, Veolia Water Technologies GmbH, Celle, Germany).
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5

Deoxynivalenol (DON) Extraction and Analysis

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Acetonitrile, water (both analytical grade), diethyl ether, hydrochloric acid, potassium thiocyanate, sodium chloride, sodium hydrogen carbonate, sodium sulfate, and sodium thiosulfate were purchased from VWR (Ismaning, Germany). DON, formic acid (>95%), silver carbonate, hexane, pyridine, acetic anhydride, hydrogen bromide in acetic acid (33 wt %), deuterium oxide, and deuterated chloroform were bought from Sigma Aldrich (Steinheim, Germany). Dichloromethane was purchased from Merck (Darmstadt, Germany) and [13C6]-glucose was aquired from Euriso-Top (Saarbrücken, Germany). The unlabeled reference compounds D3G and DON, as well as the labeled standard [13C15]-DON, were bought from Coring System Diagnostix (Gernsheim, Germany).
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6

Comprehensive Analytical Procedures for Dietary Compounds

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HPLC grade methanol, acetone and methyl tert-butyl ether were acquired from Fisher Scientific Scharlau Chemie (Loughborough, UK), sodium chloride was purchased from POCH S.A.
(Sowińskiego, Poland). Ultrapure water was obtained with a Milli-Q system (Millipore Ibérica, Madrid, Spain). Magnesium chloride hexahydrate, ammonium carbonate, acetonitrile, hexane and ethanol (HPLC grade), acetic acid, ammonium acetate were purchased from Scharlab (Sentmenat, Spain). Calcium chloride dihydrate was obtained from Merck (Darmstadt, Germany). Sodium hydrogen carbonate and potassium dihydrogen phosphate were purchased from VWR (Llinars del Vallès, Spain). Butyl hydroxytoluene (BHT) was acquired from Scharlau Chemie S.A.
(Barcelona, Spain). Potassium chloride was obtained from Panreac (Castellar del Vallès, Spain).
All digestive enzymes (porcine α-amylase, porcine pepsin, porcine bile extract and porcine pancreatin) were purchased from Sigma-Aldrich (Darmstadt, Germany).
Caffeic acid, ferulic acid, p-coumaric acid and 5-O-caffeoylquinic acid commercial patterns were purchased from Sigma-Aldrich (St. Louis, MO, USA); and quercetin-3-O-glucoside from Extrasynthese (Genay, France). Phytoene and β-carotene standards were obtained from Carote-Nature (Ostermundigen, Switzerland), α-carotene was purchased from Supelco-Merck (Darmstadt, Germany) and lutein from Acros Organics (New Jersey, USA).
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7

Detailed Synthesis of Labeled Glycine

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Chemicals were of high-quality grade and used as received unless stated otherwise. Most chemicals were purchased from Sigma Aldrich. The HU227 strain of E. coli was a kind donation from Professor Raner of the University of North Carolina at Greensboro. Unlabeled glycine was purchased from Sigma Aldrich. Phthalic anhydride, thionyl chloride, toluene, tin-copper couple, ethyl 3-bromopropionate, 2-butanone, sodium iodide, tetrakis (triphenylphosphine) palladium (0), dimethyl acetamide, hexane, diethyl ether, sodium chloride and sodium hydrogen carbonate were all purchased from VWR. Labeled glycine [2-13C glycine] was purchased from Cambridge isotopes. hexane was further distilled to make it very pure for the chromatographic work.
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8

Analytical Methods for Levofloxacin Determination

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For chemical analysis, acetonitrile (ACN) and formic acid were LC–MS grade from Honeywell (Wabash, IN, USA), and water was ultrapure Milli-Q grade (18.2 MΩ cm−1 resistivity at 25 °C). Analytical standard of levofloxacin (LFX) (purity 99.4%) was purchased from Lab Instruments S.r.l. (Castellana Grotte, Puglia, Italy). Potassium peroxymonosulphate, with the commercial name of Oxone® (PMS, KHSO5·0.5KHSO4·0.5K2SO4), sodium persulphate (PDS, reagent grade, ≥ 98%), hydrogen peroxide (H2O2, 30%), potassium iodide (KI, ≥ 99.5%), sodium acetate trihydrate (CH3COONa·3H2O, ≥ 99%), monobasic potassium phosphate (KH2PO4, ≥ 99%), dibasic potassium phosphate (K2HPO4, ≥ 98%), sodium chloride (NaCl, ≥ 99.5%), calcium sulphate dihydrate (CaSO4·2H2O, ≥ 99%), magnesium sulphate (MgSO4, ≥ 97%), magnesium sulphate heptahydrate (MgSO4·7H2O, ≥ 98%), potassium chloride (KCl, ≥ 99%), urea (≥ 99.5%), peptone, yeast extract, agar, tryptone, and enzymatic digest of soybean meal were purchased from Sigma-Aldrich (St. Louis, USA), sodium hydrogen carbonate (NaHCO3, ≥ 99.5%) from VWR Chemicals (Radnor, PA, USA), glacial acetic acid (CH3COOH, ≥ 99.9%) and methanol (CH3OH, LC–MS grade) from Carlo Erba reagents (Milano, Italy), calcium chloride dihydrate (CaCl2·2H2O, ≥ 97%). All chemicals were used as received without further purification.
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9

Comprehensive Reagent Acquisition Details

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2.1. Materials αT, ammonium acetate, ascorbic acid, butylated hydroxytoluene (BHT), dioxane, n-hexane, methanol (MeOH), ethylenediaminetetraacetic acid (EDTA) and sodium-perchlorate (NaClO4) were purchased from Sigma-Aldrich (Saint Louis, MO, USA). Rac-tocol (rT) was acquired from Matreya LLC (Pleasant Gap, PA, USA). Acetonitrile (ACN), tetrahydrofuran (THF), absolute ethanol (EtOH), isopropanol (IPA), sodiumchloride (NaCl), disodium-hydrogen-phosphate hydrate (Na2HPO4*2 H2O) and sodium-hydrogencarbonate (NaHCO3) were purchased from VWR International (Radnar, PA, USA).
Potassium-dihydrogen-phosphate (KH2PO4), sodium-dihydrogen-phosphate (NaH2PO4), D-glucose hydrate (D-glucose*1 H2O) and calcium-chloride hydrate (CaCl2*2 H2O) were obtained from Reanal (Budapest, Hungary).
Potassium-chloride (KCl) and Triton-X were purchased from Spektrum 3D (Budapest, Hungary, from 2008: part of VWR), disodium-sulfate (Na2SO4) from Fine Chemical Co. (Budapest, Hungary) and magnesium-chloride hydrate (MgCl2*6 H2O) from Scharlau (Barcelona, Spain).
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