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Fetal bovine serum (fbs)

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FBS (Fetal Bovine Serum) is a widely used cell culture supplement. It provides a rich source of growth factors, proteins, and other nutrients essential for the growth and maintenance of a variety of cell types in vitro. FBS serves as a critical component in cell culture media, supporting cell attachment, proliferation, and differentiation.

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560 protocols using fetal bovine serum (fbs)

1

Cultivation of Healthy and Cancerous Human Cell Lines

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Four different commercially available human cell lines were used in this study. Two lines represented healthy cell types. Human dermal fibroblasts (HDFa) (Gibco, USA), were grown in DMEM:F12 (1:1) + Glutamax (Gibco, USA) culture medium, supplemented with 10% FBS (Biosera, GB) and 100 I.U./mL of penicillin and 0.1 mg/mL of streptomycin (Biosera, GB). Normal human astrocytes (NHA) (ScienCell, Carlsbad, CA, USA), were cultivated in Astrocyte Media (ScienCell, USA) supplemented with 2% FBS (ScienCell, USA), 1% AGS (100×; ScienCell, USA) and 100 I.U./mL of penicillin and 0.1 mg/mL of streptomycin (Biosera, GB).
The other two cell lines represented tumor cell types. Human neuroblastoma cell line (SH-SY5Y) (ECACC, UK), was cultivated in DMEM:F12 (1:1) + Glutamax (Gibco, USA), supplemented with 10% FBS (Biosera, GB) and 100 I.U./mL of penicillin and 0.1 mg/mL of streptomycin (Biosera, GB). Human glioblastoma cell line (T98G) (ECACC, UK), was cultivated in DMEM high glucose medium (Sigma-Aldrich, USA), supplemented with 10% FBS (Biosera, GB) and 100 I.U./mL of penicillin and 0.1 mg/mL of streptomycin (Biosera, GB).
Cells were cultivated at standard conditions (5% CO2, 37 °C, humidified atmosphere). HDFa and T98G were plated at the density of 6.3 × 103 cells/cm2, NHA and SH-SY5Y were plated at the density of 9.4 × 103 cells/cm2.
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2

Cell Culture Conditions for Esophageal Cancer

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Overexpression and editing experiments were carried out using the FLO-1 esophageal adenocarcinoma cell line obtained from the ECACC General Cell Collection and CP-A (KR-42421) Barrett’s Esophagus cells from ATCC (catalogue number CRL-4027). FLO-1 cells were grown at 37 °C and five per cent CO2 in DMEM + 2 mM Glutamine + 10% FBS (Biosera) + 1/10,000 units of penicillin–streptomycin. CP-A cells were grown at 37 °C and five per cent CO2 in Keratinocyte serum-free medium with 50 µg ml−1 bovine pituitary extract and 5 ng ml−1 recombinant human EGF (17005042, Thermo Fisher). For passaging of CP-A cells, 250 mg L−1 soybean trypsin inhibitor in PBS was used (17075029, Thermo Fisher). Gene knockdown experiments were performed on OE19 cells obtained from the Francis Crick Institute cell services, OE33 cells obtained from the ECACC General Cell Collection and MFD1 cells obtained from the OCCAMS Consortium. OE19 and OE33 cells were grown in RPMI + 2 mM Glutamine + 10% FBS (Biosera) + 1/10,000 units of penicillin–streptomycin. MFD1 cells were grown in DMEM + 2 mM Glutamine + 10% FBS (Biosera) + 1/10,000 units of penicillin–streptomycin. All cells were maintained at 37 °C and five per cent CO2, validated by short tandem repeat analysis and routinely checked for mycoplasma contamination.
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3

Cell Culture Practices for Diverse Models

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Mouse embryonic stem cells were grown in Dulbecco's Modified Eagle Medium (Thermo Fisher Scientific) supplemented with fetal bovine serum (FBS, 15% Biosera or 10% Sigma), 1x non-essential amino acids (Thermo Fisher Scientific), 2 mM L-glutamine (Thermo Fisher Scientific), 1x penicillin/streptomycin (Thermo Fisher Scientific), 0.5 mM beta-mercaptoethanol (Thermo Fisher Scientific), and 10 ng/ml leukaemia inhibitory factor (produced in-house). ESCs were grown on gelatinised plates at 37⁰C and 5% CO 2 . Cell lines expressing dTAG fusion proteins were treated with 100 nM dTAG-13 (produced by Behnam Nabet and Nathanael Gray 76 or Carole Bataille and Angela Russell) to induce protein depletion.
Drosophila melanogaster SG4 cells were grown adhesively at 25°C in Schneider's Drosophila Medium (Thermo Fisher Scientific) supplemented with 1x penicillin/streptomycin and 10% heat-inactivated FBS (Biosera). Human HEK 293T cells were grown at 37⁰C and 5% CO 2 in Dulbecco's Modified Eagle Medium, supplemented with 10% FBS (Biosera), 1x penicillin/streptomycin, 2 mM L-glutamine and 0.5 mM beta-mercaptoethanol. All cell lines were routinely tested to ensure they were mycoplasma free.
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4

Cell Culture Conditions for Immortalized Cell Lines

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All cells were maintained at 37°C in a 5% CO2 atmosphere. Immortalized hTERT RPE-1 cells were cultured using DMEM:F12 medium containing 10% Fetal Bovine Serum (BioSera), 0.123% sodium bicarbonate, and 2 mM L-glutamine. DLD-1 and HCT116 cells [22 (link)] were grown in DMEM medium containing 10% Fetal Bovine Serum (BioSera). CHM13-hTERT cells (CHM13) [23 (link)] were cultured as in [24 (link)]: in DMEM:F12 medium containing 10% Fetal Bovine Serum (BioSera) supplemented with 1x Gutamax (ThermoFisher—35050061), 1xNEAA (ThermoFisher 11140050), 1mM Sodium Pyruvate, 1x Insulin-Transferrin-Selenium (ThermoFisher—41400045).
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5

Human OCCC Cell Lines Cultivation

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The human OCCC cell lines OVTOKO, RMGV, and OVISE were obtained from the Health Science Research Resources Bank of Osaka, Japan. OVTOKO and OVISE were cultured in RPMI (Nacalai Tesque) supplemented with 10% fetal bovine serum (FBS) (Biosera). RMGV was cultured in Ham‐F (Nacalai Tesque) supplemented with 10% FBS (Biosera, Nuaille, France). All cell lines were certified to be free of fungal, bacterial, and mycoplasma contaminations by the cell bank.
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6

Cell Culture Protocols for Various Cell Lines

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Mouse embryonic stem cells were grown in Dulbecco’s Modified Eagle Medium (Thermo Fisher Scientific) supplemented with fetal bovine serum (FBS, 15% Biosera or 10% Sigma), 1× non-essential amino acids (Thermo Fisher Scientific), 2 mM l-glutamine (Thermo Fisher Scientific), 1× penicillin/streptomycin (Thermo Fisher Scientific), 0.5 mM beta-mercaptoethanol (Thermo Fisher Scientific), and 10 ng/ml leukaemia inhibitory factor (produced in-house). ESCs were grown on gelatinised plates at 37 °C and 5% CO2. Cell lines expressing dTAG fusion proteins were treated with 100 nM dTAG-13 (produced by Behnam Nabet and Nathanael Gray87 (link) or Carole Bataille and Angela Russell) to induce protein depletion.
Drosophila melanogaster SG4 cells were grown adhesively at 25 °C in Schneider’s Drosophila Medium (Thermo Fisher Scientific) supplemented with 1× penicillin/streptomycin and 10% heat-inactivated FBS (Biosera). Human HEK 293 T cells were grown at 37 °C and 5% CO2 in Dulbecco’s Modified Eagle Medium, supplemented with 10% FBS (Biosera), 1× penicillin/streptomycin, 2 mM l-glutamine and 0.5 mM beta-mercaptoethanol. All cell lines were routinely tested to ensure they were mycoplasma free.
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7

Culturing 4T1-Luc and RAW264.7 Cells

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4T1-Luc cells were purchased from the Japanese Collection of Research Bioresources (JCRB; Osaka, Japan, JCRB1447), and RAW264.7 cells were obtained from the American Type Culture Collection (ATCC; Manassas, VA, USA). 4T1-Luc cells were cultured in RPMI-1640 (FUJIFILM Wako Pure Chemical, Osaka, Japan) containing 10% fetal bovine serum (FBS; Biosera, Nuaille, France) and 1% (v/v) penicillin–streptomycin-amphotericin B suspension (FUJIFILM Wako Pure Chemical). RAW264.7 cells were cultured in Dulbecco’s modified Eagle’s medium (DMEM; FUJIFILM Wako Pure Chemical) containing 10% FBS (Biosera) and 1% (v/v) penicillin–streptomycin–amphotericin B suspension (FUJIFILM Wako Pure Chemical). Both cell lines were maintained at 37 °C under 95% air and 5% CO2 atmosphere. All experiments were performed using cells of less than 20 passages. Regular assessments for Mycoplasma contamination were performed using commercially available kits (EZ-PCR™ Mycoplasma Detection Kit, Biological Industries, Beit Haemek, Israel).
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8

Cell Culture Conditions for Multiple Cell Lines

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COS7, H1299, DU145, HeLa-FRT and U2OS-FRT were grown in DMEM medium and K562 cells were cultured in RPMI-1640 medium, both supplemented with 10% FBS (Biosera) and 2 mM L-glutamine (Thermo Fisher Scientific). Parental H1299 cells and H1299 cells in which RNF4 had been knocked out using CRISPR were grown in RPMI-1640 medium supplemented with 10% FBS (Biosera) and 2 mM L-glutamine (Thermo Fisher Scientific). These cells were a kind gift from Prof Ron Hay (University of Dundee). A description of the method used to generate this line is described elsewhere43 (link).
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9

Expansion and Validation of Viral Isolates

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All viral isolates were expanded in African green monkey kidney cells (VERO, subtype V1) as previously described [22 (link)]. Briefly, cells were washed once with DMEM (Sigma) supplemented with 1% FBS (Biosera) to wash off the V1 growing media (DMEM + 10% FBS). Then, where the titre of the virus inoculum was known, 100 pfu/ml in DMEM supplemented with 1% FBS was added to each flask and incubated at room temperature for 30 min. Some infections were done directly from original material which had no titre, in which case the inoculum was titrated from a 10–1 to 10–5 dilution and the resulting virus was assessed for titre. Flasks were then topped up with DMEM supplemented with 1% FBS. Cells were incubated at 37 °C (5% CO2) for approximatively 4 days until extensive cytopathic effects were observed. Supernatant was harvested and clarified by centrifugation at 2000 rpm for 10 min then aliquoted and frozen at − 80 °C. All procedures related to virus culture were conducted in a biosafety level 3 + (BSL3 +), according to Health and Safety Executive (HSE) guidelines. All virus stocks generated were sequence-validated prior to use.
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10

Melanoma Cell Line Culture and Authentication

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Melanoma cancer cell line Mel Juso was cultured in DMEM that was supplemented with 1 g/L Glucose (Corning), 10% FBS (Biosera), and 100 U/ml penicillin/streptomycin (Corning). Melanoma cell lines: Mel Ju, A7, HMCB, WM239A, WM852, and A2058 were cultured in RPMI-1640 supplemented with 10% FBS and 100 U/ml penicillin/streptomycin (Corning). SK-MEL-3 and HT144 cells were cultured in McCoy’s 5A medium supplemented with 10% FBS (Biosera), 100 U/ml penicillin/streptomycin (Corning). Mel Juso, Mel Ju, Mel Ho, and SK-MEL-3 cells were kindly provided by Prof. Anja Bosserhoff (Friedrich-Alexander University Erlangen-Nuremberg, Germany). A7, HMCB, WM239A, WM852, HT144, and A2058 HT144 cells were kindly provided by Prof. Göran Jönsson (Lund University, Sweden). All cell lines were cultured at 37 °C in a humidified atmosphere containing 5% CO2. Cells were trypsinized with 0.25% trypsin (Corning, Cat No. 25–053-CI). Cell Line authentication has been performed for all the cell lines presented in this study. Immortalized keratinocytes were cultured and transfected as described previously [24 (link)]. BCL3ANT was dissolved in DMSO at different concentrations and stored at -20 °C until use.
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