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6 protocols using percoll plus

1

Isolation and Culture of Rat Nodose Ganglion Neurons

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The nodose ganglia were excised from anesthetized rats and placed in ice-cold Ca2+- and Mg2+-free Hank’s balanced salt solution (Gibco, Grand Island, NY, USA) supplemented with penicillin and streptomycin (100 U/mL and 100 μg/mL, respectively; Gibco). The ganglia were cleaned of connective tissue and desheathed, and then were enzymatically dissociated by incubation in HEPES-buffered DMEM/F-12 (DMEM/F-12; Gibco) containing collagenase Ia (1 mg/mL; Sigma-Aldrich), dispase II (1 mg/mL; Sigma-Aldrich), and DNase I (100 U/mL; Sigma-Aldrich) at 37°C for 40 minutes. Thereafter, they were mechanically dissociated by passing 5–10 times through a fire-polished glass Pasteur pipette before separation with a Percoll PLUS (Sigma-Aldrich) density gradient. Individual cells were harvested by centrifugation at 700 × g for 3 minutes. They were then plated onto coverslips precoated with poly-L-lysine (Sigma-Aldrich) and were incubated overnight at 37°C in DMEM/F-12 with 10% fetal bovine serum (Gibco) and antibiotics in a humidified 5% CO2 atmosphere.
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2

Monocyte isolation via Ficoll-Paque and Percoll

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Monocytes were isolated as previously described, using Ficoll-Paque Premium 1.073 (GE Healthcare, Uppsala, Sweden) [12 (link)] and hyperosmotic Percoll Plus (Sigma-Aldrich, St. Louis, MO, USA; prepared as described by Repnick et al. [13 (link)]) or by discontinuous density centrifugation using isotonic Percoll Plus (Sigma-Aldrich, St. Louis, MO, USA) at densities 1.070 g mL−1, 1.062 g mL−1, 1.060 g mL−1 and 1.058 g mL−1. Monocytes within a band located at the interface of the Percoll solution and DPBS/media were collected and diluted with 4 mL of Ca2+/Mg2+ free DPBS containing 1 mmol L−1 EDTA. An aliquot of the cells was stained with May-Grunwald stain (Merck Millipore, Burlington, MA, USA) to confirm the presence of monocytes [14 (link)].
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3

Purification of Cells using Percoll PLUS

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A working solution of Percoll PLUS (Sigma Aldrich), with initial density of 1.130 g ml−1, was prepared by diluting Percoll to 72% in 0.15 M NaCl. Self-generating gradients of cells in Percoll were prepared by mixing 7.2 ml of Percoll working solution and 0.8 ml cell suspension in 0.15 m NaCl and centrifugation at 23,000×g at 20 °C for 30 min in a fixed-angle rotor (A27 8 × 50) in a Sorvall RC6+ centrifuge. The density of the self-generated gradients was determined by measuring the refractive index with a digital refractometer (ORD 1RS, Kern Optics, Germany) of control samples without cells, taken from the tubes at different distances from the bottom and using a standard curve (refractive index vs density) supplied by the manufacturer.
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4

Isolation and Treatment of Neutrophils

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Citrated whole blood was obtained by venepuncture and red blood cells removed by dextran sedimentation for 45 minutes. Neutrophils were isolated from the cell-enriched plasma by Percoll PLUS (Sigma, UK) gradient centrifugation at 700 g for 30 minutes and resuspended in phenol-free RPMI (Thermo Scientific, UK) supplemented with 10% FCS (Thermo Scientific, UK) and 2mM L-glutamine (Lonza, Switzerland). Isolated neutrophils were counted using a 0.4% Trypan Blue solution and diluted to 2 × 106 neutrophils/ml to ensure the same number of viable cells were used between groups and experiments. For experiments examining the effects of IgG, cells were treated with a FcR blocking reagent (Miltenyi, UK) (2 μl per 1 × 106 neutrophils) for 20 minutes prior to addition of 200 μg/ml purified IgG.
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5

Microalgae cultures for colloid tracking

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Cultures of CR strain CC125 were grown axenically in a Tris-Acetate-Phosphate medium32 at 21 °C under continuous fluorescent illumination (100 μE m−2 s−1, OSRAM Fluora). Cells were harvested at ∼5 × 106cells ml−1 in the exponentially growing phase, then centrifuged at 800 r.p.m. for 10 min and the supernatants replaced by DI-water (sedimentation experiment) or by a Percoll solution (tracking and spreading experiments; Percoll Plus, Sigma) already containing the desired concentration of PS colloids (Polybead Microspheres, diameter d=1±0.02 μm).
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6

Cryopreserved Sperm Purification and Analysis

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Cryopreserved straws were thawed using a heating pad at 37 °C for 30 s. Then, the whole volume of each straw was transferred into labeled 0.5 mL tubes, and the proportion of motile spermatozoa was evaluated with the computer-assisted sperm analysis (CASA) system. After that, the samples were washed three times by adding 500 µL of PBS (phosphate saline solution; Sigma-Aldrich, St. Louis, MO, USA) and centrifuged for 10 min/5000 RPM for the disposal of egg yolk extender residues.
For the extraction of RNA and proteins, the cell suspensions were subjected to a single-layer Percoll® Plus (Sigma-Aldrich, St. Louis, MO, USA) density gradient separation, according to Ďuračka et al. [85 (link)].
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