The largest database of trusted experimental protocols

Anti cd9

Manufactured by System Biosciences
Sourced in United States, United Kingdom

Anti-CD9 is a monoclonal antibody that specifically binds to the CD9 cell surface antigen. CD9 is a member of the tetraspanin protein family and is expressed on a variety of cell types, including platelets, leukocytes, and certain stem cells. The Anti-CD9 antibody can be used for the detection and characterization of CD9-expressing cells.

Automatically generated - may contain errors

26 protocols using anti cd9

1

Comprehensive Protein Expression Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
The primary antibodies used were anti-collagen I, anti-VEGF and anti-PDGFBB (Abcam, Cambridge, UK); anti-TSG101, anti-CD9, anti-CD63, and anti-CD81 (System Biosciences, Mountain View, CA, USA). The primary antibodies anti-CD41, anti-TGF-β, anti-bFGF, anti-cleaved-caspase-3, anti-Runx2, anti-β-catenin, anti-β-tubulin, anti-calnexin, anti-Bcl-2, anti-CHOP, anti-Bad and phosphorylated Bad (p-Bad), anti-Erk1/2 and phosphorylated Erk1/2 (p-Erk1/2), anti-Akt and phosphorylated Akt (p-Akt) antibody were all obtained from Cell Signaling Technology (Danvers, MA, USA). The anti-PERK and phosphorylated PERK (p-PERK) antibodies were obtained from Santa Cruz Biotechnology.
+ Open protocol
+ Expand
2

Exosomal Gluc Protein Detection

Check if the same lab product or an alternative is used in the 5 most similar protocols
293T cells expressing hGluc, hGluc-Lactadherin, hGluc-Lactadherin-GFP were washed in PBS and lysed in radioimmunoprecipitation assay (RIPA) buffer (Cell Signaling) with protease inhibitors (Sigma-Aldrich). Protein concentration was determined by bicinchoninic assay (BCA) (Thermo Fisher Scientific). The total exosome or cell protein lysate from each sample was loaded on a 4–15% SDS polyacrylamide gel (Bio-Rad) and transferred onto polyvinylidene fluoride membranes (Bio-Rad). Membranes were blocked in 5% milk or 5% BSA in Tris-Buffered Saline (Thermo Fisher Scientific) with 0.1% Tween-20 (Sigma-Aldrich) for 1 hour and incubated with anti-Gluc (1:1000, Nanolight), followed by binding of goat anti-rabbit IgG horseradish peroxidase (1:10,000, Santa Cruz Biotechnology). Bands were visualized using an enhanced chemiluminescence (ECL) kit (Thermo Fisher Scientific).
For exosome characterization, the total exosomal protein content isolated from the conditioned medium was quantified using BCA as above. The primary antibodies used in this study were anti-CD63 (1:1000, System Bioscience), anti-CD9 (1:1000, System Bioscience), anti-CD81 (1:1000, System Bioscience), anti-Gluc (1:1000, Nanolight), and anti-β-actin (1:2000, Abcam).
+ Open protocol
+ Expand
3

Exosomal Gluc Protein Detection

Check if the same lab product or an alternative is used in the 5 most similar protocols
293T cells expressing hGluc, hGluc-Lactadherin, hGluc-Lactadherin-GFP were washed in PBS and lysed in radioimmunoprecipitation assay (RIPA) buffer (Cell Signaling) with protease inhibitors (Sigma-Aldrich). Protein concentration was determined by bicinchoninic assay (BCA) (Thermo Fisher Scientific). The total exosome or cell protein lysate from each sample was loaded on a 4–15% SDS polyacrylamide gel (Bio-Rad) and transferred onto polyvinylidene fluoride membranes (Bio-Rad). Membranes were blocked in 5% milk or 5% BSA in Tris-Buffered Saline (Thermo Fisher Scientific) with 0.1% Tween-20 (Sigma-Aldrich) for 1 hour and incubated with anti-Gluc (1:1000, Nanolight), followed by binding of goat anti-rabbit IgG horseradish peroxidase (1:10,000, Santa Cruz Biotechnology). Bands were visualized using an enhanced chemiluminescence (ECL) kit (Thermo Fisher Scientific).
For exosome characterization, the total exosomal protein content isolated from the conditioned medium was quantified using BCA as above. The primary antibodies used in this study were anti-CD63 (1:1000, System Bioscience), anti-CD9 (1:1000, System Bioscience), anti-CD81 (1:1000, System Bioscience), anti-Gluc (1:1000, Nanolight), and anti-β-actin (1:2000, Abcam).
+ Open protocol
+ Expand
4

Adipocyte Differentiation Assay Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Minimum essential medium α (MEMα), Opti-MEM alpha, and fetal bovine serum (FBS) were obtained from Gibco (Carlsbad, CA, USA). Total exosome isolation reagent, and lipofectamine RNAiMAX was purchased from Invitrogen (Foster city, CA, USA) and 5-(N,N-Dimethyl) amiloride hydrochloride (DMA), insulin, 3-isobutyl-1-methylxanthine (IBMX), dexamethasone (DEXA), anti-TRPML1, and oil red O dye were purchased from Sigma Chemical Co. (St. Louis, MO, USA). Antibodies against PPARγ was purchased from Santa-Cruz Biotechnology, Inc. (CA, USA). Antibodies against C/EBPα, and β-actin were obtained from Cell Signaling Technology (Beverly, MA, USA). Exosome-depleted FBS and exosome marker antibodies including anti-CD9, anti-CD81, anti-CD63, and anti-Hsp70 were procured from System Biosciences (Palo Alto, CA, USA). Anti-LAMP1 antibody was purchased from Abcam (Cambridge, MA, USA).
+ Open protocol
+ Expand
5

Exosomal Protein Characterization by Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
Proteins were extracted from cells and purified exosomes with RIPA buffer containing 25 mM Tris HCl pH 7.6, 150mM NaCl, 1% NP-40, 1% sodium deoxycholate, 0.1% SDS (Thermo scientific, Rockford, lL USA). Protein concentration was measured with a BCA Protein Assay Kit (Pierce, Rockford, IL, USA). Proteins (30 μg) were loaded with 4%–12% gradient polyacrylamide gel (Invitrogen, Carlsbad, CA, USA) and then blotted onto PVDF membranes (Millipore, Watford, UK). Primary antibodies were incubated overnight at 4°C on the membrane and included: anti-CD9, anti-CD63, and anti-Hsp70 (1:1000 dilution; System Bioscience, Mountain View, CA, USA). The secondary antibodies were incubated for 1 h at room temperature and included: anti-rabbit (1:2,000 dilution, System Bioscience, Mountain View, CA, USA) for CD9, CD63, and Hsp70. Immunoreactive bands were imaged via luminescence using an IVIS imaging system (XenogenCorp., Alameda, CA, USA) and detection reagents (Roche, Nutley, NJ, USA).
+ Open protocol
+ Expand
6

Isolation and Characterization of Extracellular Vesicles from B16F0 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fresh extracellular vesicles were isolated from serum-free media conditioned by B16F0 cells for 24 hours and imaged with scanning electron microscopy (SEM) as described previously [18 (link), 21 (link)]. Briefly, EVs were isolated from cell-conditioned media by differential centrifugation as follows: 300xg for 10 minutes to remove cells, 2,600xg for 10 minutes to remove residual cells and debris, 10,000xg for 60 minutes to remove microvesicles, and 100,000xg for 2 hours to collect nano-scaled vesicles in pellets. The resulting pellet was resuspended, washed once in DPBS, and re-pelleted at 100,000xg for 2 hours. Once isolated, nano-scaled vesicles were resuspended in DPBS and kept on ice. EVs were then imaged using SEM. The abundance of proteins contained in B16F0 EVs were compared against B16F0 whole cell lysate by Western blot analysis using methods described previously [20 (link)]. Specifically, membranes were probed with rabbit anti-CD9, CD63, CD81, and Hsp70 antibodies (System Biosciences, Mountain View, CA), and mouse anti-β-actin and β-tubulin antibodies (Santa Cruz Biotechnology, Dallas, Texas). Proteins were transferred to Bio Trace PVDF membrane (PALL Life Sciences, Pensacola, FL) and detected using Pierce ECL Western Blotting Substrate (Life Technologies).
+ Open protocol
+ Expand
7

Western Blot Analysis of Exosomal Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Proteins (20 μg) were separated using bis-Tris–HCl-buffered 4%–12% gradient polyacrylamide gels (Invitrogen, Carlsbad, CA, USA) and blotted onto PVDF membranes (Millipore, Watford, UK). Membranes were blocked with 3% skim milk in TBS-T (20 mM Tris, 0.1% Tween 20, and 137 mM NaCl) at room temperature for 1 h. Primary antibodies were incubated overnight at 4°C as follows: anti-AIP1/Alix (1:250 dilution; BD Biosciences, San Jose, CA, USA), anti-CD63 (1:500 dilution; System Bioscience, Mountain View, CA, USA), anti-CD9 (1:500 dilution; System Bioscience, Mountain View, CA, USA), and anti-calnexin (1:500 dilution; Santa Cruz Biotechnology, Santa Cruz, CA, USA). Membranes were then incubated with secondary antibodies at room temperature for 1 h after washing three times with TBS-T. Secondary antibodies were used as follows: anti-mouse for AIP1/Alix (1:2,000 dilution; Invitrogen-Molecular Probes, Eugene, Oregon), anti-rabbit for CD63 and CD9 (1:2,000 dilution; System Bioscience, Mountain View, CA, USA) and anti-goat for calnexin (1:2,000 dilution; Invitrogen-Molecular Probes, Eugene, Oregon). Immuno-reactive bands were visualized using ECL reagents (Roche, Nutley, NJ, USA) and imaged using the LAS-3000 imaging system (Fuji Film, Tokyo, Japan).
+ Open protocol
+ Expand
8

Exosome Protein Characterization by Western Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
EPC exosomes and NIH3T3 exosomes were lysed with ice-cold radioimmunoprecipitation assay (RIPA) lysis buffer (Abcam, Cambridge, MA, USA) containing protease and phosphatase inhibitors (Cell Signaling, Boston, MA, USA). All lysed samples were kept on ice for 30 min and centrifuged for 10 min at 4 °C at 10,000×g. The cell lysates were collected, and protein concentrations were measured using a DC protein assay (Bio-Rad, Hercules, CA, USA). Approximately 20 μg of exosomes protein was loaded into each lane for western blot. All exosome-specific primary antibodies including anti-CD9, anti-CD63, and anti-CD81 (System Biosciences, Palo Alto, CA, USA) were used at 1:1000 dilution, and exosome-validated peroxidase-labeled secondary antibody was at 1: 20000 dilution. The immunoreactive protein bands were visualized by ECL detection kit (GE Healthcare, Pittsburgh, PA, USA) and analyzed using ImageJ software.
+ Open protocol
+ Expand
9

Western Blot Analysis of Cell Death Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Samples were loaded onto a 10% SDS‐PAGE gel and then transferred to a polyvinylidene fluoride membrane. Binding of the primary antibody was detected by peroxidase‐conjugated secondary antibodies and enhanced chemiluminescence. The sources of antibodies and dilutions used for Western blot analysis were as follows: anti‐RIPK3(1:1000, ProSci, Cat #:2283), anti‐RIPK3(1:1000, Cell Signaling Technology, Cat#:13526), anti‐MLKL (1:1000, EMD Millipore, Cat#MABC604), anti‐RIPK1(1:500, BD Biosciences, Cat#:610458), anti‐CD63(1:1000, System Biosciences, Cat#:EXOAB‐CD63A‐1), anti‐TSG101(1:1000, Abcam, Cat#:ab30871), anti‐CD81(1:1000, System Biosciences, Cat#:EXOAB‐CD81A‐1), anti‐CD9(1:1000, System Biosciences, EXOAB‐CD9A‐1), anti‐Calnexin (1:1000, Cell Signalling Technology, Cat#:2433S).
+ Open protocol
+ Expand
10

Extracellular Vesicle Protein Profiling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell protein lysates were extracted using RIPA buffer (Sigma) including fresh protease and phosphatase inhibitors and standard western blotting protocol was performed as described before62 (link). For the EV marker analysis, 1 × 1011 sEVs mL−1 was loaded on the SDS gel. Primary antibodies: Anti-AnnexinA2 (Genscript A01471, 1/1000 dilution), anti-β-Actin (Abcam ab6276, 1/5000 dilution), anti-CD-9 (System Biosciences EXOAB-CD9A-1, 1/10000 dilution), anti-CD44 (Cell Signaling #3570, 1/1000 dilution), anti-CD63 (System Biosciences EXOAB-CD63A-1, 1/10,000 dilution), anti-CD81 (System Biosciences EXOAB-CD81A-1, 1/10,000 dilution), anti-Fibronectin (Abcam ab2413, 1/1000 dilution), anti-HSP-70 (System Bisociences EXOAB-HSP70A-1,1/10,000 dilution), anti-NEFL (Cell Signaling #2837, 1/1000 dilution), anti-OLIG2 (Genscript A01474, 1/1000 dilution), and anti-PTEN (Cell Signaling #9188, 1/1000 dilution). Secondary antibodies used: Polyclonal Goat Anti-Rabbit/Mouse Immunoglobulins/HRP (Dako P0447/8, 1/3000 dilution) antibodies and Anti-Rabbit Immunoglobulins/HRP (ExoAb antibody Kit, System Biosciences EXO-AB-HRP, 1/3000 dilution). Chemiluminescence was observed using a UVP Chemstudio instrument (Analytik Jena) and the Vision Works software. All experiments have been repeated at least three times.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!