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5 protocols using anti cd107a pe cy7

1

Profiling Cytokine Response in T Cells

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Freshly-isolated splenocytes were resuspended in RPMI 1640 containing 10% FBS and 2 mM L-glutamine and stimulated with a single immunodominant OLP (10 µg/mL), OLP mix (1 µg/mL for each OLP) or rRpfB protein (5 µg/mL). To evaluate cytotoxic degranulation activity of T cells, anti-CD107a-PE-Cy7 (BD Biosciences, San Jose, CA, USA) was added into the culture medium. Brefeldin A (GolgiPlug, BD Biosciences) and monensin (GolgiStop, BD Biosciences) were added 2 hours later. After another 10 hours of incubation, splenocytes were first stained with ethidium monoazide (Sigma) and then stained with anti-CD3-V500, anti-CD4-V450 and anti-CD8-APC-H7 (all from BD Biosciences). The stained cells were permeabilized using Cytofix/Cytoperm kit (BD Biosciences) and then stained with anti-IFN-γ-APC, anti-TNF-α-PE and anti-IL-2-FITC (all from BD Biosciences). Fluorescence-activated cell sorting (FACS) analysis was performed using an LSRII flow cytometer (BD Biosciences) and the data were analyzed using FlowJo software (Treestar, San Carlos, CA, USA). T cells positive for the various combinations of cytokines and degranulation were analyzed and quantified using a Boolean gating function in FlowJo software [31 (link)].
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2

Cytokine Production and Degranulation of NK Cells

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IFN-γ and TNF-α production by NK cells was evaluated in all samples available for phenotypic analysis after overnight stimulation with or without IL-12 and IL-18 (5 ng/mL) in the presence of 10 µg/mL of brefeldin A (BFA) added during the last 3 h of culture. Surface staining with anti-CD3-PE, anti-CD56-PE-CF594, and anti-CD16-FITC (BD Bioscience, Franklin Lakes, NJ, USA) was performed. Then, cells were fixed with medium A reagent and permeabilized with medium B reagent (Nordic Mubio, Lifespan Biosciences, Seattle, WA, USA) in accordance with manufacturer’s instructions. Cytokine determinations were performed by intracellular cytokine staining (ICS) with anti-IFN-γ-PerCp-Cy5.5 (BioLegend, San Diego, CA, USA) and anti-TNF-α-APC (BioLegend, San Diego, CA, USA) monoclonal antibodies and analyzed by flow cytometry. The CD107a degranulation assay was performed to assess the cytotoxic potential. Cells were stimulated overnight with IL-12 and IL-18 (as above), then incubated with K562 target cells for the last 4 h in the presence of BFA and anti-CD107a-PE-Cy7 (BD Bioscience, Franklin Lakes, NJ, USA).
Data are expressed as the difference between the percentage of cytokine or CD107a-positive+ NK cells in the stimulated and unstimulated samples.
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3

Multiparameter Flow Cytometry Assay

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PBMCs stimulated with the same peptides were collected together, washed twice, and stained with FV450 (BD) for 15 min at room temperature (RT) and anti CD107a PE‐Cy7, anti CD3 FITC, anti CD45 APC‐Cy7, anti CD4 PE, anti CD8 APC, and anti CD137 PE‐Cy5 (BD) for 30 min at 4 ℃. Cells were washed twice in FACS buffer, fixed and permed using Fixation/Permeabilization kit (PeproTech), and stained for intracellular IFN‐γ (anti IFN‐γ BV510, Biolegend) for 15 min at 4 ℃. Cells were washed twice with FACS buffer before analyzed with Canto II (BD) or CytoFLEX (Beckman) flow cytometer.
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4

MAIT Cell Functional Assay with E. coli

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PBMCs were cultured in 10 ng/ml recombinant human IL-7 (R&D Systems), a combination of IL-12 and IL-18 (10 ng/ml and 100 ng/ml, respectively; PeproTech) for 24–48 h, as indicated or left untreated at 37°C and 5% CO2 in RPMI medium supplemented with 10% fetal calf serum and 50 μg/ml gentamicin (Gibco) (RF10 medium) prior to functional assay. MAIT cell functions were determined in vitro using a paraformaldehyde (PFA)-fixed E. coli stimulation (D21 strain, MOI as indicated) in the presence of 1.25 μg/ml anti-CD28 mAb (BD Biosciences) [11 (link)]. PBMCs were further cultured for 24 h, and in selected experiments, 0.4 μg/ml anti-CD107a PECy7 (BD Biosciences) was added at the start of bacterial stimulation, and monensin (Golgi Stop, BD Biosciences) was added during the last six hours of the stimulation. In selected experiments, cells were stained with Cell Trace Violet (CTV) Cell Proliferation Kit (Life Technologies) as per manufacturer’s instructions and cultured in RF10 medium with fixed E. coli in the presence of anti-CD28 for six days as described [12 (link)].
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5

Evaluating NK-92 Cell Degranulation in Fungal Infections

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Degranulation of NK-92 cells was evaluated as previously described with some modifications [28 (link)]. In brief, a total of 5 × 105 NK-92 cells were incubated in 500 µL RPMI medium 1640 (1×) + GlutaMAX-I medium (Gibco) in the presence or absence of A. fumigatus or R. arrhizus hyphae. After adding 5 µL anti-CD107a-PE-Cy7 and 0.3 µL BD GolgiStop (both BD Biosciences) and incubating at 37 °C for 4 h, we assessed degranulation by flow cytometry (FACSCantoII, Becton Dickinson, San Jose, CA, USA) using the following antibodies: anti-CD3-APC-Cy7, anti-CD45-FITC, and anti-CD56-APC (all BD Biosciences), and 7-amino-actinomycin-D (Beckman Coulter, Krefeld, Germany).
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