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Tumor necrosis factor alpha tnf α

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Tumor necrosis factor-alpha (TNF-α) is a laboratory reagent used in research applications. It is a cytokine that plays a crucial role in the immune system's inflammatory response. TNF-α is involved in the regulation of a wide range of biological processes, including cell proliferation, differentiation, and apoptosis.

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14 protocols using tumor necrosis factor alpha tnf α

1

Pharmacological Inhibition of HDAC2 Attenuates Inflammatory Cytokine-Induced Apoptosis

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HDAC2 inhibitor CAY10683 was purchased from Sellect (Houston, USA). DMEM basic and fetal bovine serum (FBS) were obtained from Gibco (NY, USA). Lipopolysaccharide (LPS, purity of 99%), tumor necrosis factor alpha (TNF-α, purity of 97%), and D-galactosamine (D-gal, purity of 98%) were purchased from Sigma (St. Louis, USA). Rabbit anti-rat/human HDAC2, bcl2, cytochrome c (cyt c), apoptosis protease activating factor 1 (apaf1), caspase 3/cleaved-caspase 3, caspase 9, cleaved-caspase 9, histone H3 (H3), and acetylated histone H3 (AH3) antibodies were obtained from Cell Signaling Technology (Boston, USA). Rabbit anti-rat/human bax antibody was obtained from Abcam (Cambridge, UK). Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and cytochrome c oxidase subunit 4 isoform 1 (cox IV) antibodies were purchased from Proteintech (Wuhan, China). The goat anti-rabbit fluorescent secondary antibody (IRDye800) was obtained from LI-COR Biosciences Inc. (Lincoln, USA). RNAiso Plus, PrimeScript™ RT reagent, and SYBR Premix Ex Taq kits were purchased from TaKaRa (Dalian, China). The purified mitochondrial permeability transition pore (MPTP) fluorescence detection kit was purchased from GENMED (Shanghai, China).
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2

Isolation and Culture of Primary Hepatocytes

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Primary HCs were isolated from mice as previously described12 (link) and were cultured in Dulbecco’s modified Eagle’s medium (DMEM, Invitrogen, Camarillo, CA) supplemented with 10% fetal bovine serum (FBS, Gibco, Gaithersburg, MD, USA), 100 units/ml penicillin and 100 μg/ml streptomycin. AML12 and L02 (human immortalized hepatocytes) and HepG2 and Huh7 (human hepatoma cells) were purchased from the Shanghai Cell Bank of the Chinese Academy of Sciences, and the base media were DMEM-F12 (AML12) and Roswell Park Memorial Institute-1640 (Invitrogen, Camarillo, CA) (L02) and DMEM (HepG2 and Huh7) with the same FBS and antibiotics as above. In addition, AML12 cells were cultured with 1× insulin-transferrin-sodium selenite media supplement (Sigma‒Aldrich, St. Louis, MO, USA). Primary HCs and AML12 cells were treated in vitro with tumor necrosis factor alpha (TNFα, 10 ng/ml) (Sigma‒Aldrich, St. Louis, MO, USA) for 12–24 h to induce cell injury. The AKT signaling pathway-specific blocker MK2206 (10 ng/ml) (Med Chem Express, Danvers, USA) was used in primary HCs for 24 h, or the CXC receptor 2 (CXCR2) antagonist SB225002 (10 ng/ml) (Med Chem Express, Danvers, USA) was used in primary HCs for 48 h in the signaling-blockade experiments.
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3

Targeted Nanoparticle Delivery for Arthritis

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1,2-Distearoyl-sn-glycero-3-pho-sphoethanolamine-N-[met-hoxy(poly-ethyleneglycol)-2000] (DSPE-PEG2000), 1,2-distearoyl-sn-glycero-3phosphoethanolamine-N-[maleimide(polyethylenegl-ycol)-2000] (DSPE-PEG2000-Mal), dipalmitoylphosphatidylcholine (DPPC), and cholesterol were purchased from Avanti Polar Lipids Inc (Alabaster, AL, USA). iRGD peptide (CRGDKGPDC) was synthesized by GL biochem Ltd (Shanghai, China). Indocyanine green (ICG) and tumor necrosis factor alpha (TNF-α) were purchased from Sigma-Aldrich Co. (St Louis, MO, USA). Bovine type II collagen, complete Freund’s adjuvant, and incomplete Freund’s adjuvant were purchased from Condrex, Redmond, WA, USA. Human umbilical vein endothelial cells (HUVECs) were purchased from the American Type Culture Collection (Manassas, VA, USA). Male DAB/1J mice were obtained from Vitalriver Experimental Animal Technology Ltd (Beijing, China). Animals received care in accordance with the Guidance Suggestions for the Care and Use of Laboratory Animals.
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4

Cytokine Stimulation of Retinal Cells

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The human cytokines Interleukin 10 (IL-10), Transforming Growth Factor beta-1 (TGFβ1), Transforming Growth Factor beta-2 (TGFβ2), Transforming Growth Factor beta-3 (TGFβ3), and Tumor Necrosis Factor Alpha (TNFα) were purchased from Sigma-Aldrich, Interleukin 4 (IL-4) and Interferon Gamma (IFNy) from R&D Systems/Bio-Techne (R&D Systems/Bio-Techne, Wiesbaden-Nordenstadt, Germany), and Interleukin 6 (IL-6) and Vascular Endothelial Growth Factor165 (VEGF) from PeproTech (PeproTech, Winterhude, Germany). Porcine TGFβ3 was purchased from Biozol (Biozol, Eching, Germany), whereas porcine TGFβ1, TGFβ2, IL-4, IL-6, IL-10, IFNy and TNFα were from R&D System/Bio-Techne. Since there was no porcine VEGF available, the above mentioned human VEGF was also used for stimulation of pRMG.
To diminish the influence of cytokines present in FCS, both confluent pRMG and MIO-M1 cells were rinsed two times with prewarmed serum-free medium, followed by starvation for 1 h at 37°C and 5% CO2 with serum-deprived medium. Afterwards, cells were treated over night with IFNy, IL-4, IL-6, IL-10, TGFβ1, TGFβ2, TGFβ3, TNFα or VEGF165, respectively, in a randomized plate design at a concentration of 5 ng/ml in 2 ml medium without FCS. Untreated cells cultured in serum-free medium served as a control. For this study, cells were treated with each cytokine separately, but not with multiple cytokines in combination.
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5

EPA Modulation of Hepatocyte Inflammation

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Human hepatoma HepG2 cells (ATCC, Manassas, VA, USA) were grown in Dulbecco’s modified Eagle’s medium (DMEM; Thermo Fisher, Pittsburgh, PA, USA) containing 10% fetal bovine serum (FBS; Atlanta Biologicals, Norcross, GA, USA) and 1% Penicillin–Streptomycin–Neomycin Antibiotic Mixture (Thermo Fisher, Pittsburgh, PA, USA) at 37 °C in 5% CO2. HepG2 cells were treated with various concentrations (25–100 μM) of EPA (Nu-chek Prep, Inc., Elysian, MN, USA) conjugated with fatty acid free bovine serum albumin (BSA; Sigma-Aldrich, St. Louis, MO, USA) or BSA for 24 h and 48 h. Based on pilot studies, we used 50 μM for 24 h and it did not affect cell viability (not shown) but was effective on metabolic responses studied and thus used in additional experiments. In order to replicate inflammation induced by HF feeding in the mouse study, HepG2 cells were treated with 25 ng/mL tumor necrosis factor-alpha (TNF-α) (Sigma-Aldrich, St. Louis, MO, USA) for 4 h prior to being treated with TNF-α supplemented with 50 μM EPA for 6 h.
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6

TRBP Knockout HeLa Cell Transcriptional Analysis

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One day before transfection, TRBP knockout HeLa cells were inoculated at 2×106 cells in a 9 cm dish. Cells were transfected with 3 μg of pGL2-TAR-luciferase or pGL2-ΔTAR-luciferase, along with pcDNA5-TRBP-WT, pcDNA5-TRBP-L326A/Y358A, or empty vector with Lipofectamine 2000 (Invitrogen). Four hours later, medium was exchanged into 10 ml of medium containing 10% FBS. Twenty-four hours after transfection, the cells were seeded at 2×105 cells/well in a 12-well culture plate, and after 24 h, 20 ng of Tumor Necrosis Factor alpha (TNFα, Sigma-Aldrich) and 40 μg of cycloheximide (CHX, Wako) was added to the medium. At 6 and 10 h after TNFα/CHX treatment, the cells were photographed using Axiovert 200 microscope (ZEISS) and the cells were collected with Trypsin-EDTA. After washing the collected cells with PBS, 50 μl of RIPA Buffer was added and dissolved on ice for 20 min. After centrifugation at 7000×g for 10 min, the supernatant was mixed with 2×SDS-PAGE Sample Buffer and used for western blotting. In addition, total RNA was also recovered and the amount of mRNAs of GIT2 and IER3 genes were quantified using specific primers for each gene (Table S4).
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7

Colorectal Cancer Cell Line Maintenance

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Colorectal cancer cell lines HT‐29, HCT116, RKO, SW620 and Lovo were purchased from ATCC (Manassas, VA, USA). HEK293T cell line was kindly provided by Dr Huashun Li from Tongji University, Shanghai, China. All CRC cell lines and HEK293T were maintained in DMEM supplemented with 10% FBS, 100 μg/mL penicillin, and 100 units/mL streptomycin. The 104‐compound library and IKK‐16 were purchased from Selleck Chemicals (Houston, TX, USA). Doxorubicin (DOX), mefloquine (Mef), and tumor necrosis factor alpha (TNF‐α) were purchased from Sigma‐Aldrich (St Louis, MO, USA).
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8

Murine IL-1β Preparation and Activation

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Murine IL-1β, prepared in phosphate-buffered saline (PBS; HyClone, Logan, USA) containing 0.1% bovine serum albumin (BSA; Beyotime, Shanghai, China), was purchased from R&D Systems (Minneapolis, USA). Lipopolysaccharide (LPS) and tumor necrosis factor-alpha (TNF-α) were purchased from Sigma (St Louis, USA).
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9

Cell culture and virus propagation

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HeLa cells purchased from American Type Culture Collection (USA) were maintained in DMEM (Corning Mediatech, USA) supplemented with 10% fetal bovine serum (FBS; Corning Mediatech) and 1% penicillin/streptomycin. THP-1 cells were cultured in RPMI 1640 (Corning Mediatech) supplemented with 10% FBS, 2 mM glutamine, 10 mM HEPES, 1 mM sodium pyruvate, 0.05 mM 2-mercaptoethanol, and 1% penicillin/streptomycin. Sodium arsenite (NaAsO2; AS), mitoTEMPO (MT), carbonyl cyanide chlorophenylhydrazone (CCCP), tumor necrosis factor-alpha (TNF-α) and cycloheximide (CHX) were purchased from Sigma-Aldrich (USA).
CVB3 and recombinant CVB3-GFP have been previously described [12 (link)]. Viruses were propagated in HeLa cells, and virus titration was conducted using plaque assays as previously described [13 (link)].
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10

Induction of iNOS with Poly I:C

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The following reagents and concentrations were used in experiments: 10 μg/mL Poly I:C (Sigma Aldrich, St. Louis, MO, USA), 100 μmol/L L-NG-Nitroarginine methyl ester (L-NAME, Sigma Aldrich, St. Louis, MO, USA), 10 μmol/L SB203580 (Cell Signaling Technology, Danvers, MA, USA). For a positive control of iNOS induction, 10 ng/mL tumor necrosis factor alpha (TNFα, Sigma Aldrich, St. Louis, MO, USA) was used. Agonists, inhibitors and vehicle controls were provided to cells in the presence of culture media.
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