Openarray system
The OpenArray system is a versatile lab equipment designed for high-throughput gene expression analysis. It enables the processing of multiple samples simultaneously, allowing for efficient and accurate data collection.
Lab products found in correlation
10 protocols using openarray system
Extracellular RNA Quantification Protocol
Profiling Extracellular Vesicle miRNAs
EV Small RNA Profiling by OpenArray
OXTR Genetic Risk Score Calculation
Genotyping of TCF7L2 rs7901695
Extracellular miRNA Profiling Protocol
RNA Extraction and miRNA Expression Analysis
Genetic Profiling: DNA Extraction and Genotyping
Profiling Serum miRNAs by qRT-PCR
Validating Imputation Accuracy via Genotyping
In addition, imputed variants rs190200374 and rs80035109 at 15q21.2 were genotyped using a TaqMan® chemistry-based PCR platform (Open Array™ system) and custom-made TaqMan® SNP Genotyping assays (Applied Biosystems). The allelic calling analysis was performed using TaqMan Genotyper v1.3 software and OpenArray™ SNP Genotyping Analysing software. For quality control, two independent readers interpreted the results. Random selection of all samples (about 5% in H2000 and 12% in YFS) was re-genotyped. No discrepancies were discovered in the replicate tests for the variants.
Concordances between the genotyped and imputed SNPs were calculated using threshold 0.7 for converting probabilistic genotypes of imputed SNPs to hard calls.
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