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8 protocols using anti cd16 32 93

1

Multiparameter Flow Cytometry for Immune Cell Analysis

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Different combinations of the following fluorescence-labeled antibodies were used for flow cytometry: For analysis of DC subsets in the lymph nodes a combination of CD103 (2E7, BioLegend), CD11c (N418, BioLegend) anti-CD16/32 (93, BioLegend) and MHC-II (M5/114.15.2, BioLegend) was used. For analysis of Tfh cells and GC B cells in spleen and lymph nodes a combination of anti-CD4 (RM4-5, BioLegend), anti-CD19 (1D3, BioLegend), anti-B220 (RA3-6B2, eBioscience), anti-CD16/32 (93, BioLegend), anti-PD1 (29F.1A12, BioLegend), anti-CXCR5 (L138D7, BioLegend), anti-CD44 (IM7, BioLegend), anti-FAS (SA367H8, BioLegend), anti-IgG1 (A85-1, BD Biosciences) and anti-GL7 (GL7, BioLegend) was used.
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2

Comprehensive Immune Cell Profiling

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Anti-Ly6G (1A8), anti-Ly6C (HK1.4), anti-CD45.2 (104), anti-NK1.1 (PK136), anti-CD19 (6D5), anti-Thy1.2 (53–2.1), anti-CD11b (M1/70), anti-F4/80 (BM8), anti-CD64 (X54-5/7.1), and anti-CD16/32 (93) were purchased from BioLegend. Anti-CD11c (HL3) and anti-SiglecF (E50-2440) were purchased from BD Biosciences (CA, USA). Anti-CD115 (ASF98) and anti-MHC class II (M5/114.15.2) were purchased from Thermo Fisher Scientific. Anti-CD204 (REA148) and REA control (REA293) were purchased from Miltenyi Biotech (Bergisch Gladbach, Germany). Dead cells were excluded by DAPI (Dojindo, Kumamoto, Japan).
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3

Synthesis and Characterization of Pam2LPs

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Pam2LPs were synthesised, as described previously.14 (link) Poly(I:C) was purchased from GE Healthcare Life Sciences (27-4732-01).
EndoGrade® Ovalbumin was purchased from Hyglos (321001). Anti-TLR2 Ab (Clone:
6C2; cat. no. 12-19021-80) and a mouse IFN-γ ELISA KIT (88-7314) were purchased
from eBioscience. ViaProbe was purchased from BD Biosciences (555816).
Carboxyfluorescein diacetate succinimidyl ester (CFSE) was purchased from
Molecular Probes (C1157). The following Abs were purchased from BioLegend:
anti-CD3ɛ (145-2C11, 100314), anti-CD8α (53-6.7, 100712), anti-CD11c (N418,
117310), anti-CD16/32 (93, 101302), anti-CD28 (37.51, 102111), anti-CD40 (3/23,
124607), anti-CD80 (16-10A1, 104707), anti-CD86 (GL-1, 105005) and anti-TCR
Vβ5.1,5.2 (MR9-4, 139504). An anti-TLR6 Ab (418601, MAB1533) was purchased from
R&D Systems.
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4

Multicolor Flow Cytometry Analysis

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Cells were resuspended in PBS containing 2% FCS (v/v), pretreated with anti-CD16/32 (93; BioLegend) and then stained with optimal amounts of FITC-conjugated anti-CD45.1, PerCP-Cy5.5-conjugated anti-CD4 and PE-conjugated anti-CD3 (all Biolegend). Cells were analyzed on FACSCalibur (BD Biosciences) or Attune NxT Flow Cytometer (Thermo Fisher Scientific). Data analysis was performed using FlowJo software (Tree Star).
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5

Splenic T Cell Purification

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Spleens were minced and passed through a 70-μm cell strainer to generate a single-cell suspension. Red blood cells were removed by incubation in RBC lysing buffer (Sigma). To purify CD4+ and CD8+ T cells, splenocytes were incubated with biotinylated anti-B220 (RA36B2, 1:300), biotinylated anti-CD11b (M1/70, 1:300), biotinylated anti-CD11c (N418, 1:300), biotinylated anti-CD19 (MB19-1, 1:300), biotinylated anti-CD24 (M1/69, 1:500), and anti-CD16/32 (93, 1:75), all from BioLegend for 20 min at room temperature, followed by incubation with appropriate reagents from the EasySep mouse streptavidin RapidSpheres isolation kit (Stem Cell Technologies), according to manufacturer’s protocol. Collected supernatants were enriched with T cells, and the purity of CD4+ and CD8+ cells was 92–97% based on FACS analysis.
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6

Isolation and Characterization of Ly6C+ Monocytes

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Mice were humanely euthanized by exposure to CO2. Blood was collected from mice via cardiac puncture into K3EDTA tubes and subjected to RBC lysis (eBioscience). Cells were pelleted by centrifugation at 350 X G for 10 minutes at 4°C and washed, suspended in PBS, then stained for 10 minutes with Zombie NIR (BioLegend) and purified anti-CD16/32 (93, BioLegend) to label dead cells and block Fc receptors. Next, cells were stained in wash buffer for an additional 20 minutes with the antibodies listed in the Key Resource Table. Stained cells were washed twice and strained through a 30 m strainer, then subjected to cell sorting using a Beckman Coulter MoFlo Astrios EQ configured with 355 nm, 405 nm, 488 nm, 561 nm, and 642 nm lasers. Each cell population was hierarchically gated using Beckman Coulter Summit software. Ly6CHi monocytes were defined asCD45PosCD11bHiCD115PosCD19NegCD90.2NegLy6GNegLy6CHi. Ly6CHi monocytes were further restricted to single particles by comparing height and area side scatter pulses, and dead cells were excluded by detecting the integration of the live/dead dye (Zombie NIR).
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7

Multiparameter Analysis of Murine Immune Cells

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Blood, diluted in EDTA, and the spleen were harvested from mice at various time points. Isolated splenocytes were prepared by removing the spleen membrane and passing through a 70-μm filter. Splenocytes and blood cells were washed, and RBCs were lysed as previously described (32 (link)). Single cells were incubated with anti-CD16/32 (93; BioLegend, San Diego, CA) to block Fc receptors to prevent nonspecific Ab binding and then were stained with the following mAbs conjugated to FITC, PE, allophycocyanin, or PE-indotricarbocyanine: anti-mouse CD3 (17A2; BioLegend), anti-mouse CD8 (53-6.7; BioLegend), anti-mouse CD122 (TM-β1; BioLegend), anti-mouse CD4 (GK1.5; BioLegend), anti-mouse CD25 (PC61; BioLegend), and anti-mouse CD49b (HMa2; BioLegend) Abs. For intranuclear staining, the cells were fixed and permeabilized with Foxp3 Fix/Perm solution (BioLegend) and then stained with PE-conjugated anti-mouse Helios Ab (22F6; BioLegend). The cells were analyzed using FACSCalibur in conjunction with FlowJo analysis software (BD Bioscience, Tokyo, Japan) or Gallios in conjunction with Kaluza analysis software (Beckman Coulter, Brea, CA).
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8

Neutrophil Identification by Flow Cytometry

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Single-cell suspensions from the organs and blood of mice were resuspended in PBS and stained with Zombie NIR Viability dye (BioLegend). Cells were then washed and resuspended in staining buffer (HBSS with 2 mM EDTA, 0.5% BSA, and 5% rat serum) with a saturating concentration of anti-CD16/32 (93) and stained with anti-CD45-PerCP-Cy5.5 (30-F11), anti-CD11b-APC (M1/70), and anti-Ly6-G-PE (1A8) (all BioLegend). In other experiments, anti-CD11c-FITC (N418) (BioLegend), anti-CD169-PE (REA197) and anti-F4/80-FITC (REA126) (both Miltenyi Biotec) were used. Samples were analysed on an Attune NxT flow cytometer using Attune NxT software (Thermo Fisher). Cells were gated to determine live singlets, and neutrophils were defined as CD45+, CD11b+ and Ly6G+.
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