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Transcription factor fixation permeabilization buffer

Manufactured by Thermo Fisher Scientific
Sourced in United States

The Transcription Factor Fixation/Permeabilization buffer is a solution designed for the intracellular staining and detection of transcription factors. It is used to fix and permeabilize cells, allowing for the penetration of antibodies and other reagents into the cell nucleus.

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2 protocols using transcription factor fixation permeabilization buffer

1

Multiparametric Flow Cytometry for Hypoxia Sensing

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After lysis of erythrocytes in lithium heparin-anticoagulated blood using Pharm Lyse solution (Becton Dickinson, San Jose, CA), surface staining was performed using fluorochrome-conjugated antibodies (CD15-FITC (Clone H198), CD3-PECγ7 (Clone HIT3a), CD14-APC (Clone M5E2) (BioLegend Cat# 301807, RRID:AB_314189) (all obtained from BioLegend, San Diego, USA) for neutrophils, lymphocytes, and monocytes, respectively. After fixation and permeabilization with Transcription Factor Fixation/Permeabilization buffer (eBioscience Inc., San Diego, USA), PE-conjugated anti-HIF-1α and corresponding isotype control (Clone 241812, RD Systems, Minneapolis, USA)were used to stain intracellular HIF-1α and correct for aspecific binding. Leukocytes were fixed and stored overnight in PBS containing 1% bovine serum albumin and 1% paraformaldehyde. The data were acquired with Cytomics FC500 (Beckman Coulter, Brea, CA, USA) and analyzed with Kaluza software (Beckman Coulter). Cell subtypes were identified by surface staining and sideward scatter. Mean PE fluorescence, after subtraction of isotype-fluorescence, was used as a measure of HIF-1α expression. The gating strategy used is depicted in Fig. S3.
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2

Intracellular Cytokine Staining Protocol

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Tumor cell suspensions (cultured in RPMI 1640 supplemented with 10% FCS, 100 U/ml penicillin, 100 μg/ml streptomycin, 1 mM sodium pyruvate, 50 μM 2‐mercaptoethanol and 10 mM HEPES buffer (all from Life technologies) at 37°C with 5% CO2) were stimulated with 10 nM PMA (Millipore) and 1 μg/ml Ionomycin (Sigma) for 1 h followed by 3 h with 5 μg/ml of Brefeldin A (Sigma). After stimulation, cells were stained extracellularly as described above, fixed and permeabilized using the Transcription factor fixation/permeabilization buffer from eBioscience following the recommended protocol. After permeabilization, cells were then stained for the indicated cytokines (TNF‐α clone MP6‐XT22, IFN‐γ clone XMG1.2). The same fixation/permeabilization protocol was used for Foxp3 (FJK‐16s) staining of ex vivo cells.
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