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Microflex maldi tof instrument

Manufactured by Bruker
Sourced in Germany, Morocco

The Microflex MALDI-TOF instrument is a matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometer designed for high-throughput analysis of biomolecules. It utilizes a pulsed laser to desorb and ionize samples for mass analysis, providing rapid and sensitive detection of a wide range of analytes, including proteins, peptides, and small molecules.

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5 protocols using microflex maldi tof instrument

1

Cross-linked R67 DHFR Mass Spectrometry

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The molecular masses of cross-linked R67 DHFR species
were determined by mass spectrometry using a Bruker MicroFlex MALDI-TOF
instrument. MALDI experiments were performed in positive ion mode
(delayed extraction/linear mode). A 337 nm nitrogen laser was used
for all experiments, and 1000 laser shots per data acquisition round
were employed. The accelerating voltage was 20 kV with a grid voltage
of 96% and a delayed extraction time of 220 ns. The matrix was prepared
by dissolving 10 mg of α-cyano-4-hydroxycinnamic acid in 50%
acetone and 50% 2-propanol with 5 mg of added nitrocellulose.26 (link) The matrix was spotted onto a MALDI plate and
allowed to dry. Next, the protein sample was diluted 1/10 to 1/100
in 0.1% trifluoroacetic acid (w/v) and 50% methanol and spotted. A
multipoint calibration was performed using protein 1 standard (Bruker).
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2

MALDI-TOF Analysis of Peptides

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Positive beads from library screening were placed in individual microcentrifuge tubes and each treated with 25 μL of cyanogen bromide (40 mg/mL in 70% TFA/H2O) for 12 h in the dark. The solution was dried in a SpeedVac vacuum concentrator (ThermoFisher, USA) and the peptide from each bead was dissolved in 10 μL of 1:1 CH3CN/H2O, sonicated and spun down. A small aliquot of the peptide solution (1.5 μL) was mixed with 0.5 μL of 4-hydroxy-α-cinnamic acid and 1 μL of the mixture was spotted onto a MALDI sample plate. MS analysis was performed on a Bruker Microflex MALDI-TOF instrument, and the data was analyzed by Bruker Daltonics FlexAnalysis 3.3 (Bruker Daltonic Gmb, Germany).
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3

MALDI-TOF Analysis of rPhl p 7

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Wildtype and mutant rPhl p 7 proteins were analyzed in a linear mode with a microflex MALDI-TOF instrument (Bruker, Billerica, MA) using α-cyano-4 hydroxy-cinnamic acid (dissolved in 60% acetonitrile, 0.1% trifluoroacetic acid) as a matrix. For sample preparation, protein and matrix solution were mixed in equal amounts and deposited on the target. Generated spectra were mass-calibrated using rBet v 1 (Biomay, Vienna, Austria) as a standard.
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4

Limited Proteolytic Mapping of TEFM

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TEFM was subjected to limitied proteolysis using trypsin (Sigma, protease/TEFM ratio 1: 20,000 w/w), ArgC protease (Promega, 1:1000 w/w), LysC protease (Sigma, 1:1000 w/w) for 1 h at RT. Products of protease digestion of TEFM were dissolved in a solution containing 5% acetonitrile and 0.1% tetrafluoroacetic acid and purified using C4 ZipTip. The peptide mixtures were analyzed using a Bruker MicroFlex MALDI-TOF instrument in sinapinic acid matrix with R=5000.
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5

Purification and Characterization of Organic Compounds

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All chemicals and reagents were purchased from Sigma-Aldrich, Fisher, Aces Pharma, AmBeed, or AA Blocks and used without further purification. Flash chromatography was performed using a Teledyne CombiFlash system using prepackaged silica cartridges from Teledyne. All reactions were run under inert atmosphere unless otherwise noted. RP-HPLC was performed with a Shimadzu LC-20AB pump, Shimadzu SIL-20A HT auto sampler, and Shimadzu SPD-M20A diode array detector using Shimadzu Prominence LC. RP-HPLC was performed using a Luna® C18 column (5μM, 250mm x 10 mm) (Phenomenex) with product eluting from a mixture of solvent A (water, 0.1 % TFA) and solvent B (acetonitrile, 0.1% TFA). TLC analysis was performed on aluminum backed 60 F254 silica sheets from Sigma Aldrich. NMR spectra were recorded on a Bruker Ascend 700 MHz, Bruker Avance III 500 MHz, or Bruker Nanobay 400 MHz spectrometers and referenced to deuterated solvent peak. NMR spectra were processed using Mestrelab Research’s Mnova software (Santiago de Compostela, Spain). ESI-MS was performed on an Aligent 6110 single quad mass spectrometer, HRMS was performed on a Bruker Impact II QTOF mass spectrometer, and MALDI mass spectrometry was performed on a Bruker Microflex MALDI-TOF instrument. All final compounds were purified to >95% as assessed by HPLC with UV detection at λ= 213 and 353 nm.
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