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Diluphotometer

Manufactured by Implen
Sourced in United States, Germany

The DiluPhotometer is a versatile laboratory instrument designed to accurately measure the concentration of solutions or suspensions. It utilizes the principle of optical density to determine the concentration of a sample, making it a valuable tool for various applications in scientific research and analysis.

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6 protocols using diluphotometer

1

Microbial Cultures Preparation for Biofilm Studies

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Candida albicans ATCC 90028, S. mutans ATCC
25175 and S. sanguinis ATCC 10556 were used to form test
cultures. Candida albicans was initially cultured on Sabouraud
Dextrose Agar (SDA) (Oxoid, Basingstoke, United Kingdom), while S.
mutans
and S. sanguinis were grown on Blood Agar
(Blood Agar base; Oxoid) supplemented with 5% (v/v) of defibrinated horse blood
(TCS Biosciences, Buckingham, United Kingdom). Cells were then cultured
aerobically in Brain Heart Infusion liquid medium (BHI; Oxoid) for 24 h at 37°C.
Resulting cultures were centrifugated (3000 g for 5 min),
gently washed (×2) in phosphate-buffered saline (PBS; pH 7.0), and resuspended
in Modified Dulbecco Eagle Medium (DMEM; Life Technologies, Paisley, UK)
supplemented with 10% (v/v) Fetal Bovine Serum (FBS; Life Technologies) and 50
mM glucose. Using a spectrophotometer (DiluPhotometer™; Implen, Westlake
Village, CA, USA), cell density was adjusted to an OD600 (1 ×
105 CFU/ mL of C. albicans and OD6001 × 107 CFU/ mL of streptococci cells) 18.
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2

Yeast Culture Growth and Spotting Assay

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Yeast bearing the reporter plasmids of interest were grown overnight in a shaking incubator (at 25° or 30°) in appropriate selective liquid media. The absorbance at OD600 was measured for each strain using a spectrophotometer (Implen Diluphotometer) and cultures were diluted to OD600 = 1.0. Each diluted culture (200 μL) was transferred to a 96-well plate, followed by 10-fold serial dilutions (x4) into adjacent wells. All samples were mixed and spotted using a 96-well replica plater (Sigma) on appropriate plate media. The plates were air-dried and incubated for 3-7 days.
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3

Cultivation and Metabolite Analysis of E. coli and S. boulardii

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E. coli strains were grown in 5 mL of Luria Bertani medium (5 g L−1 yeast extract, 10 g L−1 tryptone, and 5 g L−1 NaCl) in 14 mL round bottom culture tubes, at 37 °C and 250 rpm. 100 μg mL−1 of ampicillin was supplemented when necessary for selection.
Yeast peptone medium (10 g L−1 yeast extract, 20 g L−1 peptone) containing 20 g L−1 of glucose (YPD) was prepared for routine S. boulardii culture, genome editing, and plasmid transformation. Nourseothricin (100 μg mL−1), geneticin (300 μg mL−1), and hygromycin B (200 μg mL−1) were added to YPD medium when required for selection. Synthetic complete medium, which contains yeast nitrogen base without ammonium sulfate and complete supplement mixture (MP Biomedicals), was used for the inducible transactivation experiments together with 50 mM pH 5.5 potassium hydrogen phthalate buffer. 20 g L−1 of glucose or galactose was added as a carbon source. 200 μM CuSO4 was supplemented when required.
Microbial cell growth was monitored by absorbance at 600 nm (A600) using DiluPhotometer™ (IMPLEN). Consumption of carbon sources were measured by HP 1050 HPLC system equipped with Agilent 1100 Refractive Index Detector (G1362). 0.005 N H2SO4 was eluted through Rezex ROA-Organic Acid H+ (8%) column (Phenomenex) at 0.6 mL min−1 and 50 °C.
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4

Terpene Analysis in Microbial Cultures

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Terpenes and terpene derivatives collected in dodecane were analyzed through GC–MS composed of Agilent 7820A GC equipped with an HP-5 ms column and 5977E MSD (Agilent Technology, Wilmington, DE). The split ratio was 1:1, and filaments were heated at 250˚C for 2 min. The initial temperature of the column oven was 100˚C for 3 min, followed by a 10˚C/min ramp to 280˚C for 3 min. Dodecane samples from in vitro enzyme assays and yeast cultures were analyzed using 7890 GC and 5977B MSD (Agilent Technology) in identical conditions. Terpenes were identified using the National Institute of Standards and Technology (NIST) database. The identification results were confirmed and quantified using corresponding standard chemicals.
Microbial cell density in the culture broth was monitored by absorbance at 600 nm (A600) using DiluPhotometer (Implen, Westlake Village, CA). Glucose and extracellular metabolites in culture broth were quantified by HP 1050 HPLC system equipped with 1100 Refractive Index Detector (Agilent Technology), Rezex ROA Organic Acid H + (8%) column (Phenomenex, Torrance, CA), and 0.005 N H2SO4 as a mobile phase (0.6 mL/min and 50 °C).
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5

Yeast Growth Kinetics at High Temp

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The BY4742 def1Δ strain bearing the pRS426-DEF1 plasmids of interest were grown overnight in a shaking 30° incubator in -Ura media. The absorbance at OD600 was measured for each strain using a spectrophotometer (Implen Diluphotometer) and cultures were diluted to OD600 = 0.15. Each diluted culture was grown for 4 hr at 30° (recovery period) and then split into separate cultures, with half of the culture shifted to 39° and the other half remaining at 30° for 2.5 hr. The absorbance at OD600 was measured every half hour, and doubling times were calculated using the following formula: Doubling time = (Time Duration x log(2)) / (log (Final Concentration – log (Initial Concentration))).
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6

Cultivation of Akkermansia muciniphila

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Akkermansia muciniphila Muc T (ATCC BAA-835) was grown in anaerobic serum bottles sealed with butyl-rubber stoppers at 37°C with N2:CO2 (80:20 ratio) in the headspace at 1.5 atm.
Bacterial precultures were cultured overnight in minimal media supplemented with type III hog gastric mucin (Sigma-Aldrich, St. Louis, USA) (Derrien et al. 2004) (link). Growth was measured as function of optical density at 600 nm (OD600) (DiluPhotometer™, IMPLEN, Germany). These were used to inoculate 2 L minimal medium supplemented with a Glc:GlcNAc 3:1 solution (250 mg final concentration) and incubated at 37°C until an OD600 between 0.4 and 0.8 was reached.
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