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17 protocols using su11274

1

Podocyte Glucose Sensitivity and HGF Response

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Conditionally immortalized podocytes MPC-5 were kindly provided by Professor Peter Mundel (Albert Einstein College of Medicine, New York, NY, USA) and cultured as previously reported in the literature [15] .
All experiments were performed with differentiated podocytes, free of mycoplasma infection. HG culture medium was made by supplementing normal glucose RPMI 1640 medium (Thermo Gibco, Waltham, MA, USA) containing 5.5 mmol/l D-glucose with additional D-glucose (Sinopharm, Shanghai, China) for a nal D-glucose concentration at 30 mmol/l. Podocytes cultured in normal or high glucose were stimulated with or without 25 ng/ml HGF in the absence or presence of 2.5 μmol/l SU11274 (S1080, Selleck, Houston, TX, USA) for 24 h. SU11274 was added 1 h before HGF supplementation. After treatment, podocytes grown on 60mm culture dishes (Corning, New York, NY, USA) were harvested and the lysate measurement and western blotting were the same as above.
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2

Hepatocyte Culture Optimization Protocol

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Glass slides (75 × 25 mm2) were obtained from VWR (West Chester, PA). (3-acryloxypropyl) trichlorosilane was purchased from Gelest, Inc. (Morrisville, PA). Collagenase, collagen from rat tail (type I), AlexaFluor 488 anti-goat IgG, AlexaFluor 546 anti-mouse IgG were purchased from Invitrogen (Carlsbad, CA). Hepatocyte growth factor (HGF) and transforming growth factor-β1 (TGF-β1) were obtained from Sigma– Aldrich (St. Louis, MO). Phosphate-buffered saline (1× PBS), minimal essential medium (MEM), sodium pyruvate, nonessential amino acids, and fetal bovine serum (FBS) were purchased from Invitrogen. 384-well polypropylene microarray plates were obtained from Genetix (New Milton, Hampshire). Albumin ELISA kits and goat anti-rat cross-adsorbed albumin antibody were obtained from Bethyl Laboratories (Montgomery, TX). Paraformaldehyde was purchased from Electron Microscopy Sciences (Hatfiled, PA). DAPI stain mounting media was purchased from Vectorshield (Burlingame, CA). SU11274 and SB431542 were purchased from Selleckchem.
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3

Investigating EMT Signaling Pathways

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Anti-α-tubulin and GAPDH antibodies were from Sigma-Aldrich. Antibodies against human EpCAM, total ERK and Thr202/Tyr204-phosphorylated ERK, total AKT, Ser473-phosphorylated AKT, total HGFR, Tyr1234/1235-phosphorylated HGFR, Non-phospho (Active) β-Catenin (Ser45), β-Catenin, E-cadherin, Vimentin, Snail, Slug, and Twist were from Cell Signaling Technology. LY294002 (AKT inhibitor) was also from Cell Signaling Technology. SU11274 (HGFR inhibitor), Crizotinib (HGFR inhibitor), U0126 (MEK inhibitor), PF-562271 (FAK inhibitor), TAPI-1 (ADAM17 inhibitor), DAPT (γ-secretase inhibitor), and BIO (GSK3 beta inhibitor) were obtained from Selleck Chemicals. Crizotinib (HGFR inhibitor) was obtained from Med Chem Express. Antibodies against total GSK3 beta, phosphorylated GSK3 beta (phospho S9), phosphorylated ADAM17 (phospho T735), total ADAM17, phosphorylated presenilin 2/AD5 (phospho S327), total presenilin 2/AD5, V5-tag, 6× His-tag, and c-Myc-tag, as well as the Met (pY1234/pY1235) + total Met ELISA Kit (ab126451) were obtained from Abcam. Human HGFR (c-MET) and HGF recombinant proteins were obtained from Sino Biological. The four mutant Snail constructs were obtained from Addgene.
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4

Inhibition of EGFR and HSP Signaling

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Gefitinib, SU11274, 17-DMAG, and 17-AAG were obtained from Selleckchem (Houston, TX, USA). All other chemicals were acquired from Sigma Chemical (St. Louis, MO, USA), unless otherwise indicated. Anti-EGFR, anti-total ERK, anti-phosphorylated (p)-ERK, anti-total AKT, and anti-p-AKT antibodies were obtained from Cell Signaling (Danvers, MA, USA). Anti-HSP70 and anti-HSP90 antibodies were obtained from Genetex (Irvine, CA, USA). All other antibodies were purchased from Santa Cruz Biotechnology (Dallas, TX, USA).
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5

Chondrocyte Differentiation Assay

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The cell-culture reagents were provided by Gibco BRL. Recombinant murine sRANKL (#315–11) and Recombinant murine HGF (#315–23) were purchased from PeproTech. Recombinant mouse MCSF protein (#ab129146), and the following antibodies: p65 (#ab16502), TRAF6 (#ab33915), JNK (#ab124956), HGF (#ab83760), were obtained from Abcam. The following antibodies were purchased from Cell Signaling Technology: p-p65 (#3033), p-JNK (#9255), Met (#8198), p-Met (#3077), Akt (#4685), p-Akt (#4060), GSK-3β (#9315S), p-GSK-3β (#9323). NFATc1 (#sc-17834) and GAPDH (#sc-32233) antibodies were provided by Santa Cruz Biotechnology. β-actin (#60008-1-Ig) and Histone-3 (#17168-1-AP) antibodies were purchased from Proteintech Group. SU11274 was obtained from Selleck. Immunization Grade Chick type II collagen (#20012), Complete Freund’s Adjuvant (#7001), and InComplete Freund’s Adjuvant (#7002) were purchased from Chondrex.
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6

Hepatocyte Cell Culture Protocol

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Glass slides (75 × 25 mm2) were obtained from VWR (West Chester, PA). Thiol-silane was purchased from Gelest, Inc. (Morrisville, PA). Poly(dimethylsiloxane) (PDMS) was acquired from Dow Corning (Midland, MI). Collagenase, collagen from rat tail (type I), AlexaFluor 488 anti-sheep IgG and AlexaFluor 546 anti-mouse IgG were purchased from Invitrogen (Carlsbad, CA). Hepatocyte growth factor (HGF) and transforming growth factor-β1 (TGF-β1) were obtained from Sigma– Aldrich (St. Louis, MO). Sheep anti-rat albumin antibody was purchased from Bethyl Laboratories (Montgomery, TX). Phosphate-buffered saline (1× PBS), Duelbecco's modified eagle medium (DMEM), sodium pyruvate, DAPI stain and fetal bovine serum (FBS) were purchased from Life technologies. Paraformaldehyde was purchased from Electron Microscopy Sciences (Hatfield, PA). SU11274 was purchased from Selleckchem.
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7

Osteogenic Differentiation of hBMSCs

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Human bone marrow mesenchymal stem cells (hBMSCs) were bought from Cyagen Biosciences Inc., (Goleta, CA, USA). Informed consent was obtained in accordance with the Declaration of Helsinki and the Institutional Review Board of the Southern Medical University (approval number SMU-2015123, 2016.01.10). Cells were cultured at 37 °C, 5% CO2, in the Human Mesenchymal Stem Cell Basal Medium complemented with 10% of the qualified fetal bovine serum (FBS), 1% Penicillin-streptomycin and 1% Glutamine (all from Cyagen Biosciences Inc.). The potency of osteogenic, chondrogenic, and adipogenic differentiation has been confirmed before obtainment. Cells were infected with recombinant adenoviruses and the proliferation and osteogenic differentiation were assayed. In some experiments, cells were treated with signaling pathway inhibitors agents as indicated in the figure legends, including c-MET inhibitor SU11274 (10 μM), WNT inhibitor Wnt-C59 (2 μM), ERK1/2 inhibitor U0126 (10 μM), PI3K/AKT inhibitor LY294002 (10 μM) (all from Selleckchem, Houston, TX, USA), and DMSO (Sigma-Aldrich, St. Louis, MO, USA) was used as the negative control.
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8

MTT Assay for Cell Viability

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Cells were cultured in 96-well tissue culture plates (5,000 cells each well). After 24 h of plating, cells were washed with PBS 3 times and then treated with erlotinib or SU11274 (S1080, Selleck) for 48 h in DMEM containing 0.5% FBS. At the end of the culture period, cells were washed with PBS, and 20 µL of MTT solution (5 mg/mL, Sigma, St Louis, MO, USA) was added to each well, Cells were incubated for another 4 h. The absorbance was measured at 570 nm using a microplate reader. Mean values were calculated from three independent experiments and represented as means ± standard error.
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9

Inhibition of c-Met, AKT, and mTOR in MKN28 cells

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After trypsinization, 5 × 105 transfected MKN28 cells were seeded on 6‐well plates for 12 hour. After 24 hours of serum deprivation, SU11274 (phosphorylated c‐Met (p‐c‐Met) inhibitor; Selleck Chemicals, Houston, TX, USA; 5 μmol/L), MK2206 (phosphorylated AKT (p‐AKT) inhibitor; Santa Cruz Biotechnology, Dallas, TX, USA; 5 μmol/L), and rapamycin (phosphorylated mTOR (p‐mTOR) inhibitor; Selleck Chemicals, Houston, TX, USA; 200 nmol/L) were added to the 6‐well plates and cocultured for 24 hours. Then, the cells were collected and probed by western blot assay.
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10

Compound Acquisition and Preparation

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PF-03084014 (Nirogacestat, #S8018), ARQ197 (Tivantinib, #S2753), EMD-1214063 (Tepotinib, # S7067), SU11274 (#S1080) were purchased from Selleckchem (www.selleckchem.com). BMS-777607 (CT-BMS777) and Cabozantinb (CT-XL184) were purchased from ChemieTek (Indianapolis, IN, USA). GSI-XII (Z-Ile-Leu-aldehyde, HY-12465) was purchased from MedChemExpress (Monmouth Junction, NJ, USA). All compound were dissolved in DMSO to a final concentration of 10 mmol/L.
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