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Non targeting sirna

Manufactured by GenePharma
Sourced in China

Non-targeting siRNA is a laboratory tool used in research to control for off-target effects in RNA interference experiments. It serves as a negative control, exhibiting no known target within the tested system.

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16 protocols using non targeting sirna

1

Monocyte Nucleofection for Gene Silencing

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Immediately after isolation, primary human monocytes were nucleofected with On-Target Plus SMARTpool siRNA purchased from Dharmacon Inc. specific for IL7R, MAF, or MAP3K3. Nontargeting siRNA from GenePharma was used as a control. Human Monocyte Nucleofector buffer (V4XP-3024; Lonza) and the Lonza 4D-Nucleofector platform were used according to the manufacturer’s instructions with the human monocyte nucleofection program. The nucleofected monocytes were cultured in RPMI 1640 medium (Corning) supplemented with 10% (vol/vol) FBS (Gibco) and human recombinant M-CSF (20 ng/ml; PeproTech) for 48 h before the following experiments.
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2

Bora Silencing with siRNA Transfection

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siRNA oligonucleotides targeting Bora and non-targeting siRNA were purchased from GenePharma. Transfections with siRNA were performed with Lipofectamine 2000. The siRNAs against Bora were (1) 5′-CTATGAGACTTCAGATGTA-3′ and (2) 5′-TAACTAGTCCTTCGCCTAT-3′. The control siRNA (siNC) was 5′-TTCTCCGAACGTGTCACGGTT-3′.
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3

Silencing Rat Orai1 Using siRNA

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For silencing, 3 × 105 cells (6-well plate) were seeded and incubated in antibiotic-free medium for 24 h before silencing treatment. Afterward, cells were transfected with 40 pM rat Orai1 siRNA (GenePharma, Shanghai, China) and non-targeting siRNA (GenePharma, Shanghai, China) using Lipofectamine 2000 Transfection Reagent (Invitrogen, Shanghai, China) according to the manufacturer’s protocol1.
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4

Atf6 Silencing in H9c2 Cells

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H9c2 cells were seeded in 24-well plates (4 × 104 cells/well). After reaching approximately 50% confluence, the cells were transfected with a small interfering RNA (siRNA) against Atf6 or a non-targeting siRNA using Lipofectamine 2000 (Invitrogen Corporation, Carlsbad, CA, USA), according to the manufacturer’s instructions. The sequence of the Atf6 siRNA (siAtf6; Genepharma, Shanghai, China) was as follows: sense, 5'-GUGUGACUAAACCUGUUCUTT-3' and antisense, 5'-AGACUGAGAACUAGACAACTT-3'. The sequence of the non-targeting siRNA (Genepharma) was as follows: sense, 5'-UUCUCCGAACGUGUCACGUTT-3' and antisense, 5'-ACGUGACACGUUCGGAGAATT-3'. To assess the specific silencing effect of siAtf6, ATF6 protein expression was detected by immunoblot analysis.
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5

Modulating miR-155-5p and MGP in HK-2 Cells

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miR-155-5p mimics and inhibitor were bought from RiboBio (Guangzhou, China). MGP siRNAs and nontargeting siRNA were purchased from Gene Pharma (Shanghai, China). According to the manufacturer's protocol, 50 nM of miR-155-5p mimics and 100 nM of miR-155-5p inhibitor were transfected into the HK-2 cells by Lipofectamine 3000 (Invitrogen, China) in a 6-well cell plated. 100 nM of MGP siRNA was used to knockdown endogenous MGP following the manufacturer's instructions.
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6

Gene-specific siRNA Knockdown Protocol

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Gene-specific siRNAs and one non-targeting siRNA were purchased from GenePharma Co. ATG5#1 and ATG5#2 siRNAs target the sequences CCUUUG GCCTAAGAAGAAA and CAUCUGAGCUACCCGG AUA, respectively; ATG7#1 and ATG7#2 siRNAs target the sequences GGAGUCACAGCUCUUCCUU and CAGCUAUUGGAACACUGUA, respectively; Beclin1#1 and Beclin1#2 siRNAs target the sequences GGAA GCUCAGUAUCAGAGA and CAGUUUGGCACAAU CAAUA, respectively; LKB1#1 and LKB1#2 siRNAs target the sequences UGAAAGGGAUGCUUGAGUA and GAAGAAGGAAAUUCAACUA, respectively; AMPKα1 siRNA targets the sequence GAGGAGAGCUAUUUG AUUA; AMPKα2 siRNA targets the sequence GCUGU UUGGUGUAGGUAAA; ULK1 siRNA targets the sequence GCCUGUUCUACGAGAAGAA; while the sequence of the non-targeting control siRNA was 5′-UUCUCCGAACGUGUCACGUTT-3′.
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7

Silencing Wnt1 Gene Expression

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The siRNA targeting human Wnt1 and non-targeting siRNA were purchased from GenePharma Co., Ltd (Shanghai). Transfections were performed using Lipofectamine RNAiMAX (Invitrogen) according to the manufacturer’s instructions. For the RNA interference study, we tested three siRNAs designed using the target gene sequences and selected the siRNA that resulted in the greatest inhibition of the target protein.
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8

Endothelial Cell Culture and Transfection

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Human umbilical vein endothelial cells (HUVECs) were purchased from ScienceCell Research Laboratories (USA) and cultured according to the standard guideline. HUVECs were cultured in endothelial cell medium (1001, ScienceCell Research Laboratories) supplemented with 5% foetal bovine serum, endothelial cell growth supplement and antibiotic solution.
Human embryonic kidney 293T cells were purchased from ATCC (Manassas, VA, USA) and maintained in Dulbecco's modified Eagle's medium (DMEM) supplemented with 10% foetal bovine serum (Gibco, North America), 100 U/ml penicillin and 20 U/ml streptomycin. Cells were incubated at 37°C in a humidified chamber containing 5% CO2.
The adenovirus‐encoding IMP3 (ad‐IMP3) was constructed and amplified by Boi‐Link (Shanghai, China). An adenovirus‐encoding red fluorescence protein (ad‐RFP) was used as a negative control. HUVECs were transfected with ad‐IMP3 or ad‐RFP (100 pfu number/cell) for 48 h for the following experiments.
Si‐IMP3 was purchased from GenePharma Company (Shanghai, China); a non‐targeting siRNA (GenePharma, Shanghai, China) was used as a negative control. HUVECs were transfected using Lipofectamine 3000 reagent (Invitrogen, USA) according to the manufacturer's instructions.
Axitinib was resuspended in DMSO and HUVECs treated with 0.5 μg/ml Axitinib.19
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9

siRNA Analysis of AC105461.1 in Colon Cancer

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For siRNA analysis, siRNA for the AC105461.1 sequence and non-targeting siRNA were obtained from GenePharma. The sequences are listed in Table 3. Prior to transfection, approximately 5% SW620 and SW480 cells were plated into 12-well plates and cultured for at least 24 hours to achieve a confluence of 30%–50%. SiRNA transfection was conducted using X-treme GENE™ transfection reagent (Hoffman-La Roche Ltd, Basel, Switzerland) following the manufacturer’s instructions. After transfection, cells were harvested for cell proliferation assay, matrigel invasion assay, and spheroid formation assay.
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10

siRNA Analysis of lncRNA-HIF2PUT

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For small interfering RNA (siRNA) analysis, siRNA for the lncRNA-HIF2PUT sequence and nontargeting siRNA were obtained from GenePharma (Shanghai, People’s Republic of China). The lncRNA-HIF2PUT sense strand was 5′-CAGCCAUCAUGAUGGUACU-3′, and the antisense strand was 5′-AGUACCAUCAUGAUGGCUG-3′. Approximately 5% DLD-1 and HT29 cells were plated to each well of 12-well plates for at least 24 hours before transfection to achieve 30%–50% confluency. SiRNA transfection was done with X-tremeGENE™ transfection reagent (Hoffman-La Roche Ltd) according to the manufacturer’s instructions. Cells were collected after transfection for RNA isolation, cell clonogenic survival assay, and spheroid formation assay.
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