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13 protocols using alexa fluor 555 donkey anti rabbit igg h l

1

Immunofluorescence Analysis of PD-L1 in EBV-Associated Cancer Cells

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Human SUNE-1, C666-1, TWO3-EBV, TWO3-EBV+, CNE-2-EBV, CNE-2-EBV+ cells grown on a chamber slide(BD Biosciences, San Jose, CA) were washed with cold PBS, fixed with 4% paraformaldehyde in phosphate-buffered saline (PBS) for 10 min. After 1h blocking in PBS + 0.1% Tween-20 plus 3% donkey serum, cells were incubated with primary antibodies of PD-L1 (E1L3N™, Cell Signaling Technology, Danvers, MA) at 4°C overnight, after three times of washing, then with secondary antibody (Alexa Fluor 555 donkey anti-rabbit IgG (H+L), Life Technologies, LA) for 1 h at room temperature. After counterstaining with DAPI (1 μg/ml) for 10 min, slides were observed and photographed with fluorescence microscopy. These experiments were triplicated.
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2

Cochlear Protein Localization Immunohistochemistry

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The cochleae were dissected and fixed in 4% paraformaldehyde buffered PBS for 24 h and decalcified using 10% EDTA. After decalcification, the cochleae were dehydrated overnight in 20% and 30% sucrose and then embedded in the optimal cutting temperature (OCT) glue (Sakura, USA). The cochleae were sectioned into 10 μm thickness sections on a cryostat (Leica, Wetzlar, Germany). After, the sections were incubated with primary antibodies against LC3B (1 : 200, ABclonal Technology), Beclin1 (1 : 200, ABclonal Technology), SOD1 (1 : 200, ABclonal Technology), and SOD2 (1 : 200, ABclonal Technology) overnight at 4°C. Thereafter, the sections were incubated with a donkey anti-mouse IgG (H+L) conjugated with Alexa Fluor 488 (Life Technologies, CA, USA) and/or Alexa Fluor 555 donkey anti-rabbit IgG (H+L) (Life Technologies, CA, USA) at the room temperature for 2 h, followed by staining with DAPI (Life Technologies, CA, USA). Thereafter, the sections were rinsed and mounted with glycerin. The immunolabeling images were examined under a fluorescence microscope (Carl Zeiss, Oberkochen, Germany). Three mice of each group were used.
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3

Immunofluorescence Assay for STK3 Expression

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A total of 5×104 cells were placed in a 24-well plate with pre-placed sliver, and transfected for 24 h. Cells were fixed in 4% (v/v) formaldehyde at 4°C for 30 min. And then it’s closed with 3% BSA. Rabbit primary antibody STK3 (Abcam, USA) was incubated overnight and then washed three times with PBST. The second antibody, Alexa Fluor®555 Donkey Anti-Rabbit IgG (H+L) (Invitrogen, Carlsbad, CA), was treated for 1h, and STK3 expression after transfection was detected. DAPI is used to stain the nucleus. The tablets were then sealed with an anti-fluorescence quencher (Beyotime, China). The sections were observed under fluorescence microscope (DMI4000B; Leica).
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4

Immunostaining of Ovulated Mouse Eggs

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Ovulated eggs were fixed in 4% paraformaldehyde in PBS (pH 7.4) for 30 minutes and permeabilized in 0.5% Triton-X-100 for 20 min at room temperature. Then, oocytes were blocked with 1% BSA-supplemented PBS for 1 h and incubated at 4°C overnight or at room temperature for 4 h with rat monoclonal anti-mouse folr4 antibody (1:100, BioLegend, CA) or rabbit polyclonal anti-mouse ovastacin antibody (1:100, obtained from Dr. Jurrien Dean). After washing four times (5 min each) in PBS containing 1% Tween 20 and 0.01% Triton-X 100, eggs were incubated with an appropriate secondary antibody for 1 h at room temperature. Alexa Fluor 555 donkey anti-rabbit IgG (H+L) was obtained from Invitrogen (Carlsbad, CA). After washing three times, eggs were stained with PI or Hoechst 33342 (10 μg/ml) for 10 min. Finally, eggs were mounted on glass slides and viewed under a confocal laser scanning microscope (Carl Zeiss 700).
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5

Immunohistochemical Localization of rSjTH

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The parasites were embedded in OCT compound and serial cryosections (5–7 μm) were obtained. The tissue sections were fixed for 10 min in 4% formaldehyde and rinsed with PBS containing 0.3% Triton X-100, and were then incubated in blocking solution (5% bovine serum albumin in PBS) for 2 h at 25°C, followed by rabbit polyclonal antibodies against rSjTH (2 mg/mL, 1:500 dilution) and IgG from a non-immunized rabbit in blocking solution overnight 4°C. Parasite tissue sections were further incubated with Alexa Fluor 555 donkey anti-rabbit IgG (H+L) and 4’, 6-diamidino-2-phenylindole (DAPI, all from Invitrogen, Waltham, MA, USA). Fluorescence was visualized using a TCS SP5 confocal microscope (Leica Microsystems, Wetzlar, Germany).
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6

Characterization of Ovastacin and ZP2 Antibodies

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A rabbit polyclonal antibody that binds a C-terminal peptide of ovastacin395-408 and monoclonal antibody M2c.2 that binds to the C-terminal region of ZP2 have been characterized previously [32 (link)][45 (link)]. The following antibodies and lectins were obtained commercially: LCA-FITC (Sigma-Aldrich); antibodies to GP73, calregulin and EEA1, Alex Fluor 488 goat anti-rabbit IgG (H+L)(Life Technologies-Invitrogen, Carlsbad, CA); Alexa Fluor 555 donkey anti-rabbit IgG (H+L) (Life Technologies-Invitrogen); DyLight 649 goat anti–rabbit IgG (H+L) (Life Technologies-Invitrogen); and goat anti-rat IgG-HRP (Santa Cruz).
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7

Dental Pulp Stem Cell Characterization

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Deciduous teeth were collected from 3- to 11-year-old patients (n = 3) and permanent teeth were collected from adult patients (19 to 81 years of age, n = 3). Teeth were cracked open and pulps were collected and snap frozen in optimal cutting temperature (OCT) cryomount (Histolab, Gothenburg, Sweden) for subsequent 5 μm sectioning. The sections were fixed for 20 minutes in 4% paraformaldehyde (Merck, Darmstadt, Germany), rinsed and then incubated overnight at room temperature with primary antibodies against HMGA2 (1:500, Cell Signaling Technology) and vimentin (1:200, Abcam). Additional staining was performed the following day with 4',6-diamidino-2-phenylindole (DAPI) (Invitrogen, Burlington, Canada) at 300 nM applied for three minutes. Secondary antibodies used were Alexa Fluor® 555 Donkey Anti-Rabbit IgG (H + L) and Alexa Fluor® 488 Goat Anti-Chicken IgG (H + L) (Invitrogen, Eugene, OR, USA). Control sections were incubated where the primary antibody was omitted. This resulted in no detectable artifact. Additional negative control stainings were performed with isotype control for rabbit primary antibody (Invitrogen, Eugene, OR, USA), which resulted in no unspecific staining. Confocal microscopy was performed with Zeiss LSM700 CLSM and image processing was carried out with Imaris software.
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8

Liraglutide's Angiogenic Effects on Islet Transplants

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Immunofluorescent analyses were performed on 4-μm frozen sections of free islets (24 hours post treatments) or of livers transplanted with islets (30 days after graft). The angiogenic properties of liraglutide were determined using a mouse anti-rat cluster of differentiation 31 (CD31) antibody (1/200; BD Biosciences, Le Pont de Claix, France) and the insular structure of the islets was examined using a rabbit anti-rat insulin antibody (1/100, Cell Signaling). The appropriate secondary antibodies (Alexa Fluor® 555 donkey anti-rabbit IgG [H+L] [1/1000, Invitrogen, Fisher, Ilkirch, France] and Alexa Fluor® 488 donkey anti-mouse IgG [H+L] [1/1000, Invitrogen]) were used to visualise these signals and the appropriate positive and negative controls were performed. Fluorescence intensity was measured by microscopy and analysed by NIS-Elements Br Software (Nikon Instruments Inc., Champigny-sur-Marne, France). Ten different islets per condition were measured and data were expressed as the mean value of fluorescence intensity reported to analysed surface ± the standard error of the mean (SEM).
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9

Visualizing Lymphoid Tissue Microarchitecture

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Tissue fixation and cryosectioning was performed as described (8 (link)). Sections were rehydrated in PBS for 20 mins, blocked with 5% FBS in PBS/0.1% TWEEN®20 for 20 mins, and stained with primary antibodies for 1 h. Sections were washed 5 times with PBS/0.1% TWEEN®20 and secondary antibodies applied for 1 h. Slides were mounted with Fluorescence Mounting Medium (DAKO). Images were acquired on a Zeiss Z1 Observer fluorescent microscope equipped with Colibri LED light sources, or with Leica SP8 confocal microscope. The following primary antibodies were used: anti-MAdCAM1 (MECA-367, Biolegend), rabbit anti-RFP (polyclonal, Rockland), CD3-biotin (1452C11), CD35-biotin (8C12, BD). The following secondary reagents were used: donkey anti-rat-IgG (H+L) Alexa Fluor 488 (Jackson Immuno Research), donkey anti-rabbit-IgG (H+L) Alexa Fluor 555 (Thermo Fisher Scientific), Streptavidin-Alexa Fluor 488 and Streptavidin-Alexa Fluor 555 (Thermo Fisher Scientific). Conjugated antibodies: IgD-Alexa Fluor 647 (11-26c.2a, Biolegend), CD21/35-FITC (7E9). Nuclei were labeled with DAPI. Images were analyzed with ImageJ (69 (link)) and Zen (Zeiss).
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10

Multimodal Imaging of Bone Adipocytes

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Mouse femurs and tibiae were cleaned of muscle, fixed in 4% paraformaldehyde (MilliporeSigma) for 8 hours, and dehydrated in 30% sucrose solution for 24 hours. Bones were sectioned on a Leica CM1950 microtome and incubated in staining buffer (20% DMSO [MilliporeSigma], 5% donkey serum [Jackson ImmunoResearch], and 0.5% IGEPAL [MilliporeSigma]) in PBS containing primary antibodies for 8 hours. After washing with PBS and gentle shaking for 4 hours, the sections were incubated with secondary antibodies for 8 hours in the staining buffer mentioned above. After washing with PBS and gentle shaking for a further 4 hours, a rabbit anti-perilipin (MilliporeSigma, 1:400) primary antibody was used to label adipocytes, which were detected with a donkey anti–rabbit IgG (H+L) Alexa Fluor 555 (Thermo Fisher Scientific, 1:400) secondary antibody. DAPI was used to label all nucleated cells. Images were obtained using 2-photon excitation microscope (Olympus). 3D reconstruction was created using Velocity software (PerkinElmer).
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