The largest database of trusted experimental protocols

16 protocols using β galactosidase from aspergillus oryzae

1

Encapsulation of SRB, FNP, and Lactase in MPs

Check if the same lab product or an alternative is used in the 5 most similar protocols
50 mg of freeze-dried MPs for SRB and FNP, and 300 mg MPs for lactase encapsulation were transferred to a 2 mL and 50 mL eppendorf tube, respectively. MPs were suspended in 300 μL of 300 mM trehalose solution in DI water with 0.25 mM SRB (Sigma-Aldrich). Similarly, in case of FNP (FluoSpheres® carboxylate microspheres, 0.1 µm; Thermo Fisher Scientific), MPs were suspended in 1 mL nanoparticles solution diluted five times in 300 mM trehalose solution. Likewise, in case of lactase (β-galactosidase from Aspergillus oryzae; Sigma-Aldrich), MPs were suspended in 12 mL of 20 mg·mL−1 lactase solution containing 15% trehalose and 0.5% carboxymethyl cellulose (Sigma-Aldrich)43 (link). All samples were transferred into vacuum oven with vacuum on/off cycle for 4 to 5 times. This ensured that all the air pockets were removed from pored MPs and were replaced by ingredients (i.e. SRB, FNP, and lactase). Non-encapsulated SRB/FNP/lactase were separated by centrifugation at 10,000 rpm for 10 min. SRB-/FNP-/lactase-MP pellets were resuspended in DI water by brief vortexing for 1–2 s, and plunged into liquid nitrogen. All frozen samples were freeze-dried by employing the same recipe as described in Table S1.
+ Open protocol
+ Expand
2

Synthesis and Characterization of Acrylate Monomers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Gal and 2,6-lutidine were purchased from Nacalai Tesque, INC. (Kyoto, Japan). DMT-MM, p NP-Gal, and N -(2-hydroxyethyl)acrylamide ( 1a ) were purchased from Tokyo Chemical Industry Co., Ltd. (Tokyo, Japan). N -(2-Hydroxyethyl)methacrylamide ( 1b ), 2-hydroxyethyl acrylate ( 1c ), and 2-hydroxyethyl methacrylate ( 1d ) were purchased from Combi-Blocks Inc. (San Diego, USA), Nacalai Tesque, INC. and FUJIFILM Wako Pure Chemical Corporation (Osaka, Japan), respectively. 1a and 1b were used after purification by activated alumina column. 1c and 1d were used after purification by washing using hexane and then through activated alumina column according to a literature. 33) The radical initiator VA-044 was purchased from FUJIFILM Wako Pure Chemical Corporation. β-galactosidase from Aspergillus oryzae , FITC-labelled PNA from Arachis hypogaea , and FITC-labelled BSA were purchased from Sigma-Aldrich Co. LLC. (St. Louis, USA). All other reagents were commercially available and used without further purification.
+ Open protocol
+ Expand
3

Quantification of Sialyloligosaccharides by HPAEC-PAD

Check if the same lab product or an alternative is used in the 5 most similar protocols
Concentrations of 3’SL, 6’SL and SA in the reaction permeate were measured by high-performance anion exchange chromatography with pulsed amperometric detection (HPAEC-PAD) analysis using a CarboPacTM PA100 (4 mm × 250 mm) analytical column equipped with a CarboPacTM PA100 (4 mm × 50 mm) guard column (Dionex Corp., Sunnyvale, CA) on a Dionex ICS-3000 system (Dionex Corp., Sunnyvale, CA). The operating conditions and analysis procedure have been described previously [17 (link)], and resulted in base line separation of the analytes. SA (Sigma-Aldrich, Steinheim, Germany), 3’SL and 6’SL (Carbosynth Ltd, Compton, UK) were used as external standards. For novel reaction products where no standard was available, the product formation was estimated using the extinction coefficient of 3’SL. As part of the identification of the novel trans-sialylation compound 3-sialyllactose, the reaction mixture was treated with β-galactosidase from Aspergillus oryzae (Sigma-Aldrich, Steinheim, Germany) prior to HPAEC-PAD analysis and purification by anion exchange chromatography.
+ Open protocol
+ Expand
4

Enzymatic Synthesis of Galacto-Oligosaccharides from Lactulose

Check if the same lab product or an alternative is used in the 5 most similar protocols
Galacto-oligosaccharides derived from lactulose (Lu) were synthesized using a commercial lactulose preparation (670 g of lactulose per liter; Duphalac, Abbott Biologicals BV, Olst, Netherlands) and β-galactosidase from Aspergillus oryzae (16 U/mL; Sigma, St. Louis, MO, United States) (López-Sanz et al., 2015 (link)). The enzymatic reaction took place at pH 5.4, achieved after the addition of 3 mL of KOH 2M at 800 mL of Duphalac, and 50°C in an orbital shaker at 300 rpm for 24 h. Afterwards, the enzymatic reaction was stopped by heating at 110°C for 10 min. The resulting mixture contained 66% (w:w) of total carbohydrates.
The carbohydrate fraction was qualitatively and quantitatively determined by gas chromatography-flame ionization detector (GC-FID) as trimethyl silylated oxime (TMSO) derivatives following previous approaches (Cardelle-Cobas et al., 2009 (link); Hernández-Hernández et al., 2012 (link)). The carbohydrate composition of GOS-Lu, whose main involved glycosidic linkage was β(1→6), was as follows: fructose (19.5%), galactose (12.4%), glucose (1.2%), lactulose (24.7%), GOS-Lu disaccharides (13.6%), GOS-Lu trisaccharides (22.6%), GOS-Lu tetrasaccharides (5.1%) and GOS-Lu pentasaccharides (1.0%).
+ Open protocol
+ Expand
5

Eudragit L100-55 Fluorescent Bead Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Poly(methacrylic acid-co-ethyl acrylate) in 1:1 ratio, commercially known as Eudragit® L100-55 (hereafter referred to as L100), was obtained from Evonik Canada Inc. (Burlington, Ontario, Canada). 2-Nitrophenyl β-D-galactopyranoside, β-galactosidase from Aspergillus Oryzae, galactose and lactose assay kit, sodium dodecyl sulfate, acetonitrile, and disodium hydrogen phosphate were acquired from Sigma-Aldrich (St Louis, Missouri, USA). Yellow-green fluorescent beads with different sizes (100 nm, 1 µm, and 4 µm) were purchased from Life Technologies (Carlsbad, CA, USA).
+ Open protocol
+ Expand
6

Enzymatic Modification of Xanthan Gum

Check if the same lab product or an alternative is used in the 5 most similar protocols
The enzymatic modification of XG was achieved by following the protocol of Brun-Graeppi et al. using β-Galactosidase from Aspergillus oryzae which was purchased from Sigma-Aldrich (Saint Louis, MI, USA) [30 (link)]. Enzymatic modifications were achieved on XG/CNC complexes at 50 °C with an enzyme/substrate ratio of 0.37 U/mg XG. The mixtures were stirred and left to react for 22 h. The mixtures were heated at 90 °C for 5 min to deactivate the enzyme. The mixtures were then cooled and kept at 4 °C.
+ Open protocol
+ Expand
7

Cargo Release from Nanoparticles

Check if the same lab product or an alternative is used in the 5 most similar protocols
For cargo release studies, 2 mg of GosNP(rho), GosNP(icg), GalNP(rho), GalNP(dox), or GalNP(nav) nanoparticles were suspended in 5 ml of water at pH 4.5, and β‐galactosidase from Aspergillus oryzae (Sigma, #G5160) was added at 1,000 ppm (5 mg). Suspensions were stirred, and different aliquots were taken and centrifuged at different time points. The amount of cargo released was determined in a JASCO spectrofluorometer FP‐8300 by monitoring the emission (for rho, icg, dox) or the absorption (for nav) of the dye or drug in the aqueous solution, as a function of time (rho λex = 550 nm, rho λem = 580 nm; icg λex = 775 nm, icg λem = 799 nm; dox λex = 495 nm, dox λem = 556 nm; nav λem = 356 nm). The same procedure was performed without adding the enzyme to the nanoparticles suspension, as a “blank” control.
+ Open protocol
+ Expand
8

Determination of GALNS Enzyme Activity

Check if the same lab product or an alternative is used in the 5 most similar protocols
GALNS enzyme activity was determined in plasma and tissues [2 (link)]. Frozen tissues were homogenized by Bead Mill Homogenizer (OMNI International, Kennesaw, GA, USA) in 25 mmol/L Tris-HCl (pH 7.2) and 1 mmol/L phenylmethylsulphonyl fluoride. Then, homogenates were centrifuged for 30 min at 4 °C, and the supernatant was collected to a new tube and assayed for enzyme activity. Either tissue lysate or plasma (2 μL) was used for the enzymatic reaction with 22 mM 4-methylumbelliferyl-β-galactopyranoside-6-sulfate (Research Products International, Mount Prospect, IL, USA) in 0.1 M NaCl/0.1 M sodium acetate (pH 4.3) and incubated at 37 °C for 16 h. After incubation, 10 mg/mL β-galactosidase from Aspergillus oryzae (Sigma-Aldrich, St. Louis, MO, USA) in 0.1 M NaCl/0.1 M sodium acetate (pH 4.3) was added and incubated for additional 2 h at 37 °C. The reaction was stopped with 1 M glycine NaOH (pH 10.5) solution and read at excitation 366 nm and emission 450 nm by FLUOstar Omega plate reader (BMG LABTECH Inc., Cary, NC, USA). Activity is shown as nanomoles of 4-methylumbelliferone released per hour per microliter of plasma or milligram of protein. Protein concentration was determined by a bicinchoninic acid (BCA) protein assay kit (Thermo Fisher Scientific, Waltham, MA, USA).
+ Open protocol
+ Expand
9

Quantifying GALNS activity in plasma and tissues

Check if the same lab product or an alternative is used in the 5 most similar protocols
GALNS activities in plasma and tissues were determined as described previously.33 (link) Frozen tissues were homogenized with homogenization buffer consisting of 25 mmol/L Tris-HCl (pH 7.2) and 1 mmol/L phenylmethylsulfonyl fluoride by using a homogenizer. Tissue lysate or plasma and 22 mM 4-methylumbelliferyl-β-galactopyranoside-6-sulfate (Research Products International, Mount Prospect, IL, USA) in 0.1 M NaCl/0.1 M sodium acetate (pH 4.3) were incubated at 37°C for 16 h. Then, 10 mg/ml β-galactosidase from Aspergillus oryzae (Sigma-Aldrich, St. Louis, MO, USA) in 0.1 M NaCl/0.1 M sodium acetate (pH 4.3) was added to reaction sample, and additional incubation was at 37°C for 2 h. The sample was transferred to stop solution (1 M glycine, NaOH [pH 10.5]), and the plate was read at excitation 366 nm and emission 450 nm on a PerkinElmer Victor X4 plate reader (PerkinElmer, Waltham, MA, USA). The activity was expressed as nanomoles of 4-methylumbelliferone released per hour per microliter of plasma or milligram of protein. Protein concentration was determined by a bicinchoninic acid (BCA) protein assay kit (Thermo Fisher Scientific, Waltham, MA, USA).
+ Open protocol
+ Expand
10

Quantification of GALNS Activity

Check if the same lab product or an alternative is used in the 5 most similar protocols
The previously described protocols [51 (link)] determined activity levels of GALNS. Frozen tissues were homogenized with 25 mmol/L Tris-HCl (pH 7.2) and 1 mmol/L phenylmethylsulfonyl fluoride homogenization buffer. The tissue lysate or previously collected plasma was combined with 22 mM 4-methylumbelliferyl-β-galactopyranoside-6-sulfate (Research Products International, Mount Prospect, IL, USA) in 0.1 M NaCl/0.1 M sodium acetate (pH 4.3) in a 96-well plate and incubated at 37 °C for 16 h. 10 mg/mL β-galactosidase from Aspergillus oryzae (Sigma-Aldrich, St. Louis, MO, USA) in 0.1 M NaCl/0.1 M sodium acetate (pH 4.3) was added to the reaction mixture and incubated at 37 °C for an additional 1 h. 1 M glycine, NaOH (pH 10.5) was then added to arrest the reaction. Plates were transferred to a PerkinElmer Victor X4 plate reader (PerkinElmer, Waltham, MA, USA) and excited at 366 nm with an emission read at 450 nm. Results were recorded in nanomoles of 4-methylumbelliferone released per hour per microliter of plasma or milligram of protein. Conversion of plasma to protein concentration was determined by a bicinchoninic acid (BCA) protein assay kit (Thermo Fisher Scientific, Waltham, MA, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!