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32 protocols using nanoquant

1

Measuring Growth Factor Secretion

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HDMECs and HNKs were grown to approximately 75% confluence before seeding at 80 × 104 cells/well in 6-well plates. Cells were washed with HBSS and then serum starved for 24 h. HDMECs were incubated in ECGM containing 2% FBS in the absence or presence of 10 μM Iso for 6, 24 and 48 h. HNKs were also incubated for 6, 24 and 48 h with either KGM alone or KGM containing 10 μM Iso. Human FGF-2 and VEGF-A levels were determined following the manufacturers' instructions for Quantikine Duoset ELISA kits (R&D Systems, Abingdon, UK) using a TECAN Nanoquant plate reader (Tecan UK Ltd. Reading, UK).
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2

Serum Biomarker Analysis in Mice

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At the end of the second, fourth, sixth, and eighth week after administration, the mice were fasted for 12 h, and 100 µL of blood was collected from the inner canthus after anesthesia. After incubating at 26°C for an hour, the blood was centrifuged at 3500 rpm for 15 min at 4°C, and the supernatant was collected to obtain serum samples for biochemical analysis. The value of GGT was detected by a TECAN Nano Quant microplate analyzer (TECAN, Tecan Trading AG, Switzerland). The values of ALT, AST, ALP, TBA, TBIL, and DBIL were quantified with a BECKMAN COULTER AH480 biochemical autoanalyser (Beckman Coulter, Kraemer Boulevard Brea, United States).
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3

Measuring s-AA and s-T Levels by ELISA

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The remaining OFC buffer solution was sealed and taken to a private laboratory (SOMA Bioscience), where s-AA (in micrograms per milliliter) and s-T (in picograms per milliliter) were measured by ELISA using enzyme immunoassay test kits (SOMA Bioscience) and an automated analyzer (Tecan Nanoquant; Tecan, Männedorf, Switzerland) as per the manufacturer's guidelines. Validity and reliability data are unavailable for these measures. After analysis, s-T was converted to its molar value to calculate s-T:C. All analysis was completed by the same laboratory technician. All samples were analyzed within 24 h of collection. The intra-assay and interassay CV values for s-AA and s-T analysis using this method are 4.71% and 11.4%, and 7.94% and 9.4%, respectively ( 39 ).
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4

Progesterone Analysis in Maternal Plasma

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Maternal blood samples were centrifuged at 10.000 g for 20 min at 4°C and the supernatant plasma was immediately frozen at -20°C. For progesterone analysis, plasma samples were diluted 1:200 using ELISA Buffer and measured with a competitive immunoassay (Progesterone ELISA Kit, Cayman Chemical, Michigan, USA) on a NanoQuant (Tecan Group AG, Männedorf, Switzerland) according to manufacturer’s instructions.
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5

Plasma Progesterone Quantification

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Maternal blood samples were centrifuged at 10,000 g for 20 min at 4°C and the supernatant plasma was immediately frozen at −20°C. For progesterone analysis, plasma samples were diluted 1:200 using ELISA Buffer and measured with a competitive immunoassay (Progesterone ELISA Kit, Cayman Chemical, Michigan, USA) on a NanoQuant (Tecan Group AG, Männedorf, Switzerland) according to manufacturer's instructions.
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6

Exploring DKK1 Expression Differences

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We selected 16 individuals from each rs7069912 genotype matched on age and sex for mRNA analysis. Using 16 individuals per group and an alpha of 0.05 gave us 80% power to detect a 0.9 SD difference and 90% power to detect a 1 SD difference in DKK1 mRNA levels between rs7069912 carriers and non-carriers. Total RNA was extracted from whole blood collected in PAXGene tubes that were stored at −80°C using PAXgene blood RNA kit (Qiagen, Valencia, CA). The RNA was quantified using nanoQuant (Tecan, Switzerland). Real time PCR with SYBR-green labeled probes was performed. DKK1 expression levels were adjusted using beta-actin as an internal control (ΔCT = CTDKK - CTactin). The relative expression level was calculated using the mean expression level of the wild type (GG) genotype group (ΔΔCT = ΔCT - meanΔCTGG) and the relative fold change was calculated using 2ΔΔCT.
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7

Quantifying Adipogenic Transcripts in Rat

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The RNeasy kit (Qiagen; Hilden, Germany) was used to extract mRNA from aliquots of pulverized mesenteric fat to be used in reverse transcription PCR (Applied Biosystems; Foster City, CA) and semi-quantitative PCR while blinded to treatment. RNA was quantitated by absorbance at 260 nm wavelength and retained with a purity threshold > 1.8 for the 260/280 ratio (NanoQuant, Tecan; Männedorf, Switzerland). Semi-quantitative PCR was performed using SYBR Green primers: Peroxisome proliferator activated receptor gamma (Pparg, F: TGTGAAGGATGCAAGGGTTT, R:CATTCGCCCAAACCTGATGG), CCAAT/enhancer binding protein (C/EBP) alpha (Cebpa, F:TGCGCAAGAGCCGAGATAAA, R:GCGGTCATTGTCACTGGTCA), CCAAT/enhancer binding protein (C/EBP) beta (Cebpb, F:CAAGATGCGCAACCTGGAGA, R:AGCTGCTTGAACAAGTTCCG) in mesenteric fat using beta actin (Actb, F:CTGACAGGATGCAGAAGGAG, R:GATAGAGCCACCAATCCACA) as an endogenous control; the endogenous control did not vary significantly across treatment groups. All primers were designed for Rattus norvegicus by querying the Pubmed gene library with the NCBI Primer-BLAST tool [38 (link)]. Primers were designed to span an exon-exon junction with each pair separated by at least one intron in the corresponding genomic DNA. The 2−ddCT method was used to approximate relative transcript fold change between treatment groups [39 (link)].
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8

RNA Isolation and Purification from Cells

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Total RNA was isolated from about 1 million fibroblasts or cancer cells using the RNeasy Mini Kit (cat. #74104, Qiagen) following the manufacturer’s instructions, including a DNase I treatment step (cat. #79254, Qiagen). RNA from the column was eluted with 30 µl of RNase-free water (from the kit).
Photometrical adsorption measurements at 280 nm and 260 nm confirmed purity and quantity of the purified DNase-treated RNA (NanoQuant, Tecan).
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9

Salivary Cortisol Profiling in Children

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Mothers were asked to take three samples of their children’s saliva on one weekday of the week during which they wore the actigraphy watch. An oral fluid collector (OFC) consisting of a synthetic polymer swab designed to collect 0.5 mL of saliva mixed with 3 mL of OFC buffer was used to collect the samples (Soma Bioscience Ltd., Wallingford, UK). With this technique, samples are stable at room temperature for several weeks and are unaffected by recent food and drink ingestion. Salivary cortisol was determined using an enzyme immunoassay (EIA) test kit (Soma Bioscience Ltd., Wallingford, UK) and read by an automated analyser (Tecan Nanoquant, Männedorf, Switzerland). The assay range for cortisol was 0.25–32.0 ng/mL. In the case where maximum values were obtained, samples were titrated and re-analysed. Cortisol profiles were assessed using all 3 values to determine if each participant had a flat or normal cortisol profile compared to the individual group mean.
Each participant was required to provide salivary samples for 3 time points over a 24-h period. The timings were: (a) afternoon at approximately 4 p.m. (baseline); (b) 30 min before habitual bedtime; (c) 30 min after waking. Either parents or participants themselves (under adult supervision) were asked to place a cotton/polymer swab in their mouth for 30–45 s in order to collect each sample.
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10

Colorimetric Detection of H2O2 Production

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The production of H2O2 by BSA-GOx-NPs, glucose, and oxygen was determined via a classic colorimetric method, applying ammonium titanyl oxalate as the indicator. In brief, 0.1 mL of BSA-GOx-NPs or BSA-NPs suspension (50 μg/mL BSA) was mixed with 0.1 mL of different glucose concentrations (0, 0.025, 0.05, 0.1, 0.2, 0.5, 1 and 2 mg/mL). After 1 h, ammonium titanyl oxalate solution (10 μL, 10 mM) was added. The obtained yellow suspension was measured by a microplate reader (Nano Quant, Tecan) at 405 nm.
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