The largest database of trusted experimental protocols

6 protocols using hoechst 33422

1

Mitochondrial GRP75 Localization in Cells Exposed to DFX

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were plated onto glass coverslips at the confluency of ~40–50% and incubated overnight. The next day 1 µM of DFX was added and cells were incubated overnight. Following the incubation, cells were washed with cold PBS and fixed using 50:50 mix of methanol and acetone (–20°C) for 30 s, blocked in 5% BSA in PBS overnight and incubated with anti-GRP75 antibodies (D-9, Santa Cruz Biotechnology) for 1 hr at room temperature. Cells were washed three times with PBS and incubated with secondary goat anti-rabbit antibody labeled with Alexa Fluor 633 (Invitrogen) in the dark for 1 hr at room temperature. After wash in PBS, cells were mounted onto the glass microscope slides using ProLong Diamond antifade mountant with DAPI (Invitrogen) and imaged using Leica DMi8 confocal microscope after 48 hr.
Imaging with MitoTracker CM-H2Ros was performed using live cells: after incubation with DFX the media was removed and substituted with 200 nM MitoTracker solution in DMEM (no FBS), cells were incubated for 30 min, then media was discarded, and cells were incubated for 5 min in DMEM without serum. Following that, cells were washed with PBS and incubated in 8 µM Hoechst 33422 (Invitrogen) for 10 min, rinsed with PBS, placed in Live Cells Imaging Solution (Molecular Probes) and imaged on Leica DMi8 confocal microscope within 2 hr post staining.
+ Open protocol
+ Expand
2

Fluorescent Probes for Cell Viability Assessment

Check if the same lab product or an alternative is used in the 5 most similar protocols
Zirconium chloride anhydrous (ZrCl 4 ), protoporphyrin IX (PpIX), acetic acid, cobalt dichloride, dichloromethane (CH 2 Cl 2 ), oxalyl chloride, 2',7'-dichlorofluorescein diacetate (DCFH-DA), dimethylformamide (DMF), tetrahydrofuran (THF), ethanol, methanol were purchased from Sigma-Aldrich. 2'-aminoterphenyl-4,4''-dicarboxylic acid (TPDC-NH 2 ) was synthesized according to the reported reference. 41 Fetal bovine serum (FBS), phosphate buffered saline (PBS), Dulbecco's modified Eagle medium (DMEM), penicillin streptomycin 10,000 U/mL (PS), trypsin, calcein acetoxymethyl ester (calcein-AM), propidium iodide (PI), and Hoechst 33422 were ordered from Invitrogen. Low viscosity embedding media spur's kit was purchased from Electron Microscopy Sciences. Unless otherwise noted, all chemicals were used without further purification.
+ Open protocol
+ Expand
3

High-Throughput Cytotoxicity Screening and Synergy Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell lines were seeded in 384-well assay plates at a density of 1,000 cells/well in a total volume of 40 μL/well, and incubated at 37°C, 5% CO2 overnight. Following drug exposure, proliferation was measured by staining with Hoechst 33422 (Life Technologies) nuclear dye and apoptosis using YO-PRO-1 (Life Technologies) early apoptosis dye and analyzed using a Thermo CellInsight high content microscope for indicated time. IC50 values were determined using GraphPad Prism 6.0. For drug synergy, fixed dose ratios were used to determine five different drug combinations. Following 72 hours of drug exposure, proliferation and cell death was measured by staining with Hoescht (Life Technologies) nuclear dye and YO-PRO-1 (Life Technologies), respectively, and analyzed using a Thermo CellInsight High Content microscope. Synergistic, additive, or antagonistic effects were determined using the combination index (CI) method of Chou and Talalay41 (link).
+ Open protocol
+ Expand
4

High-Throughput Cytotoxicity Screening and Synergy Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell lines were seeded in 384-well assay plates at a density of 1,000 cells/well in a total volume of 40 μL/well, and incubated at 37°C, 5% CO2 overnight. Following drug exposure, proliferation was measured by staining with Hoechst 33422 (Life Technologies) nuclear dye and apoptosis using YO-PRO-1 (Life Technologies) early apoptosis dye and analyzed using a Thermo CellInsight high content microscope for indicated time. IC50 values were determined using GraphPad Prism 6.0. For drug synergy, fixed dose ratios were used to determine five different drug combinations. Following 72 hours of drug exposure, proliferation and cell death was measured by staining with Hoescht (Life Technologies) nuclear dye and YO-PRO-1 (Life Technologies), respectively, and analyzed using a Thermo CellInsight High Content microscope. Synergistic, additive, or antagonistic effects were determined using the combination index (CI) method of Chou and Talalay41 (link).
+ Open protocol
+ Expand
5

High-throughput Screening for Synergistic Drug Combinations

Check if the same lab product or an alternative is used in the 5 most similar protocols
H1975-RR cells were seeded in 384-well plates at a density of 1,000 cells/well in the presence of 2uM rociletinib or vehicle and after 24 hours exposed to three different doses of compounds from a 90-drug library for 72 hours. At the end of this period nuclei were stained with Hoechst 33422 (Life Technologies) and counted using a Thermo CellInsight high content microscope. The screen was repeated three times using varying library concentrations of 5 μg/mL, 500 ng/mL, and 50 ng/mL and each combination measured in quadruplicate. Raw cell numbers were median normalized on a per-plate basis. For each compound in the library, the relative cell number in the DMSO plate was compared with the number in the rociletinib plate using a Student’s t-test. A synergy score was developed based on the −log10 of the P value of this t-test and was signed to indicate synergistic inhibition of growth (positive score) or antagonism (negative score). The reported synergy score is based on the average of scores over three different library concentrations.
+ Open protocol
+ Expand
6

High-throughput Screening for Synergistic Drug Combinations

Check if the same lab product or an alternative is used in the 5 most similar protocols
H1975-RR cells were seeded in 384-well plates at a density of 1,000 cells/well in the presence of 2uM rociletinib or vehicle and after 24 hours exposed to three different doses of compounds from a 90-drug library for 72 hours. At the end of this period nuclei were stained with Hoechst 33422 (Life Technologies) and counted using a Thermo CellInsight high content microscope. The screen was repeated three times using varying library concentrations of 5 μg/mL, 500 ng/mL, and 50 ng/mL and each combination measured in quadruplicate. Raw cell numbers were median normalized on a per-plate basis. For each compound in the library, the relative cell number in the DMSO plate was compared with the number in the rociletinib plate using a Student’s t-test. A synergy score was developed based on the −log10 of the P value of this t-test and was signed to indicate synergistic inhibition of growth (positive score) or antagonism (negative score). The reported synergy score is based on the average of scores over three different library concentrations.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!