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18 protocols using supersignal west femto maximum sensitivity substrate ecl

1

Exosome Protein Profiling by Western Blot

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Exosomes and cell lysates were spotted on a nitrocellulose membrane (Thermo Fisher Scientific, UK) (0.5 µg protein in 40 µL for all samples – 10 µL at a time, dried under a nitrogen stream before addition of the next 10 µL on the same spot). The membrane was blocked with 3% milk (w/v) prepared in TBS-T (TBS pH 7.6 containing 0.1% Tween-20) for 1 h at RT. The membrane was then incubated with primary rabbit anti-human/mouse antibodies: anti-Alix (monoclonal, clone 3A9, ab117600, Abcam, UK), anti-TSG101 (polyclonal, 14497-1-AP, ProteinTech, UK), anti-CANX (polyclonal, 10427-2-AP, ProteinTech, UK) and anti-GAPDH (monoclonal, clone 14C10, #2118, Cell Signalling Technology, UK) antibodies (1:1000 in 3% milk), overnight at 4°C. The membrane was washed three times with TBS-T, followed by incubation with goat anti-rabbit secondary antibody (polyclonal, ab6721, 1:1000 in 3% milk) for 1 h at RT. The membrane was then washed again as above, and SuperSignal™ West Femto Maximum Sensitivity ECL substrate (Thermo Fisher Scientific, UK) was added to the membrane (50 µL per sample spot). The membrane was incubated with the substrate for 2 min at RT, and then imaged using the Gel Doc™ system (Bio-Rad, USA) under the “Intense Bands” setting. The image obtained was analysed using the Image Lab™ software (Bio-Rad, USA).
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2

SDS-PAGE and Western Blot Analysis

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Following transfection cells were washed with HBSS and lysed in either 200 μl RIPA buffer or 300 μl 2x Laemmli buffer (62.5 mM Tris-HCl, pH 6.8; 25% glycerol; 2% SDS, 0.01% bromophenol blue, and 5 mM DTT). The total cell lysate (20 μl) was heated to 95°C for 2 minutes and loaded onto a 4–20% Mini-Protean TGX precast SDS-PAGE gel (Bio-Rad) and subjected to electrophoresis at 110V for 60 minutes. Proteins were transferred to PVDF membranes (GE Healthcare) in transfer buffer (25 mM Tris, 192 mM glycine, 20% v/v methanol) for 2 hours at room temperature. Membranes were blocked with 3% w/v non-fat dry milk in Tris-buffered saline (TBS) and incubated with specific primary antibodies for 1 hour at room temperature. Following washing with TBS containing 0.05% Tween-20 (TBS-T) membranes were incubated with peroxidase-linked secondary antibody and developed with SuperSignal West Femto Maximum Sensitivity ECL Substrate (ThermoScientific) and visualized using an imaging system (UVP) with Labworks 4.1.
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3

Quantifying Thioredoxin and Caspase-1 in BEAS-2B Cells

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BEAS-2B cells were lysed in a buffer containing 20 mM Tris, 150 mM NaCl, 1% [vol/vol] Nonidet P-40, 1 mM DTT, 1% [vol/vol] Protease Inhibitor Cocktail, 1% [vol/vol] Phosphatase Inhibitor Cocktail. Total protein content was determined by the Bio-Rad DC Protein Assay kit (Bio-Rad, Hercules, CA), according to manufacturer’s instructions. 20 μg protein for WCL or 15 μL of concentrated lavage or cell culture supernatants was loaded onto polyacrylamide gels. After transfer of proteins to a nitrocellulose membrane, primary antibodies against thioredoxin (ab16965, Abcam -kindly gifted by Dr. Haendeler) and caspase-1 (sc-56036, Santa Cruz) were applied at a dilution of 1:1500 and 1:300 respectively, followed by HRP conjugated secondary antibodies. SuperSignal west femto maximum sensitivity ECL Substrate was used to visualize the proteins of interest (Thermo Scientific) and images were taken on the AIDA image analyzer.
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4

Western Blotting Procedure for Protein Analysis

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Reducing buffer (26% glycerol, 10% ß-mercaptoethanol (BME), 0.34 M Tris (pH = 7.3), and 0.1 g/mL sodium dodecyl sulfate) was added to the samples. Reduction was performed at 95 °C for 10 minutes, and equal amounts of protein were fractionated by SDS-polyacrylamide gel electrophoresis (PAGE) with 4–20% gels (Bio-Rad). The proteins were transferred to PVDF membranes, blocked for one hour with 5% milk in 0.5 TBS + 0.05% Tween 20 (TBST) buffer, and incubated for 16 hours at 4 °C with primary antibody (1:200 in 5% milk in 0.5 TBST, Table 3). After rinsing, the blots were incubated for 2 hours at 4 °C with secondary antibody (1:2000 in 5% milk in 0.5 TBST, Table 3) conjugated with HRP. Membranes were rinsed 5 times with 0.5 TBST between each step. Finally, blots were developed by rinsing for 2 minutes with fresh SuperSignal West Femto Maximum Sensitivity ECL Substrate (Thermo Scientific) in an Amersham Imager 600 (GE Healthcare).

Primary and secondary antibodies for western blotting (WB).

HostAntibodyReactivityCompanyCode
MouseIgG monoclonalc-MycSanta Cruzsc-42
RabbitIgG polyclonalERSanta Cruzsc-542
MouseIgG monoclonalß-actinAbcamab8226
GoatIgG-HRPRabbit IgG (H + L)Abcamab6721
GoatIgG-HRPMouse IgG (H + L)Abcamab6789
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5

Western Blot Analysis Protocol

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Cells were washed twice in PBS, lysed in modified RIPA buffer (50 mM Tris-HCl pH 7.5, 1 mM EDTA, 0.1% Na-deoxycholate, 150 mM NaCl, 1% NP-40, protease inhibitor cocktail, 5 mM β-glycerophosphate, 5 mM NaF, 1 mM Na-orthovanadate, 10 mM N-ethylmaleimide), and centrifuged at 15,000×g for 15 min. at 4°C. Protein concentrations were estimated using Bradford Reagent (AppliChem).
Protein extracts were combined with 4× Laemmli Sample Buffer (Bio-Rad), boiled for 10 min at 70°C, resolved on MiniPROTEAN TGX pre-cast 4–15% SDS-polyacrylamide gels (10- or 15-well), and transferred onto Hyperfilm enhanced chemiluminescence (ECL) nitrocellulose membranes (GE Healthcare). Following the transfer, membranes were blocked with 5% milk in TBST, and probed with primary and secondary antibodies. For visualization SuperSignal West Femto Maximum Sensitivity ECL Substrate (Thermo Fisher Scientific) and an Odyssey imaging system (LI-COR Biosciences) were used.
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6

Kif4 Protein Detection in Oocytes

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Twenty-five GV oocytes from each injection condition were collected after a 24-h holding period and washed through warmed PBS to remove BSA and residual media. Oocytes were transferred to a centrifuge tube in a minimal amount of buffer and snap frozen in liquid nitrogen. Samples were boiled in Laemmli sample buffer at 95°C for 5 min and loaded on a 15-well SDS–PAGE gel. Primary α-Kif4 antibody (Santa Cruz) was used at 1:1000, HRP α-rabbit (BioRad) was used at 1:5000, and blots were processed with SuperSignal West Femto Maximum Sensitivity Substrate ECL (Thermo Scientific).
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7

Western Blot Analysis of Cellular Proteins

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Western blot analysis was performed as described previously [13 (link)]. The total protein from cell lines and tissues were extracted using RIPA lysis buffer (Beyotime, Shanghai, China) complemented with protease and phosphatase inhibitors (Beyotime, Shanghai, China). The nuclear and cytoplasmic proteins were extracted using a Nuclear and Cytoplasmic Extraction Kit (Thermo Fisher Scientific, Waltham, MA, USA) according to the manufacturer’s instructions. Protein concentrations of cellular or nuclear extracts were determined using BCA Assay Kit (Thermo Fisher Scientifc, Waltham, MA, USA). The detail information of antibodies used in the present study were listed in Additional file 1: Table S5. β-actin was used as loading control. The proteins were visualized using enhanced chemiluminescence Western blot detection system (Bio-Rad, Hercules, CA, USA) according to the manufacturer’s instructions. Then proteins were visualized with SuperSignal West Femto Maximum Sensitivity Substrate (ECL, Thermo) and detected by a ChemiDocXRS system (BioRad). All of the experiments were performed three times independently.
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8

Co-Immunoprecipitation and Western Blotting

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Co‐IP was carried out using a Pierce co‐IP kit (26149, Thermo Scientific) according to the manufacturer's protocol; 10 μg of the specific antibody and IgG were used in each co‐IP reaction. Proteins were separated through SDS‐PAGE gels and transferred onto PVDF membranes (HPA043520, Bio‐Rad). After blocking, the membranes were incubated overnight with the primary antibody at 4 °C. After washing with PBST, the membranes were incubated with HRP‐conjugated secondary antibodies (Beyotime Biotechnology) for 1 h. Then proteins were visualized using Super Signal West Femto Maximum Sensitivity Substrate (ECL, Thermo Fisher Scientific) and recorded using a ChemiDocXRS system (Bio‐Rad).
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9

Western Blot Analysis of Hedgehog Pathway

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Total protein extracts were harvested and subjected to WB as described previously [23 (link)]. Primary antibodies against the following proteins were used for WB: GLI2 (ab26056; Abcam), PTCH1 (ab55629; Abcam), FOXM1 (sc-376,471; Santa Cruz Biotechnology, CA, USA), TPX2 (12,245; Cell Signaling Technology), and glyceraldehyde 3-phosphate dehydrogenase (GAPDH) (MAB374; Millipore, Billerica, MA, USA). This was followed by incubation with horseradish peroxidase (HRP)-conjugated secondary antibodies, namely normal goat anti-mouse IgG (31,430; Thermo Scientific Pierce) or normal goat anti-rabbit IgG (31,460; Thermo Scientific Pierce), and the membranes were probed with SuperSignal™ West Femto Maximum Sensitivity Substrate ECL (34,095; Thermo Fisher Scientific Inc). The immunoblot films were digitalized with Epson V700 scanner, and intensity of major bands were quantitated using Image J (National Institutes of Health, Bethesda, MD, USA). Each experiment was repeated at least thrice.
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10

Western Blot Analysis of Protein Extracts

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MB cells were harvested in cold Radio‐Immunoprecipitation Assay (RIPA) buffer (Beyotime Biotech, China) with the protease inhibitor phenylmethanesulfonylfluoride (PMSF, Beyotime Biotech, China) and incubated on ice for 20 min. After centrifugation at 13000 xg at 4°C for 20 min, supernatant was collected and measured for protein concentration (BCA protein Assay, Pierce, USA). Equal amounts of proteins (20 µg/well) were separated by 10% sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS‐PAGE) and transferred onto polyvinylidene difluoride (PVDF) membranes (Millipore, USA) at 4°C. After block with PBST‐5% skimmed milk block, the membranes were incubated with primary antibodies overnight at 4°C, then were washed and incubated with corresponding secondary HRP‐conjugated antibodies (Beyotime Biotech, China) for 2 h at room temperature. Proteins were visualized with SuperSignal West Femto Maximum Sensitivity Substrate (ECL, Thermo Fisher Scientific) and detected by a ChemiDocXRS system (Bio‐Rad, USA). Primary antibodies used in the study included: anti‐Flag antibody (Sigma Aldrich, #F3165, 1:5000 dilution), anti‐β‐actin antibody (Sigma Aldrich, #A5441, 1:5000 dilution).
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