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6 protocols using pcdna3.1 myc his expression vector

1

Recombinant Expression of EDEM2 and TXNDC11

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Recombinant DNA techniques were performed according to standard procedures (Sambrook et al., 1989 ) and the integrity of all constructed plasmids was confirmed by extensive sequencing analyses. Site-directed mutagenesis was carried out using DpnI. A p3xFlag-CMV-14 expression vector (Sigma) and pcDNA3.1-MycHis expression vector (ThermoFisher) were used to express a protein (EDEM2 or TXNDC11) tagged with 3xFlag and c-Myc at the C-terminus, respectively. pCMV-SP-TAP-EDEM2 was constructed based on pCMV, pcDNA3.1-SP-2xProA-2xTEV-6xMyc and pCMV-EDEM2-3xFlag using an NEBuilder HiFi DNA Assembly Cloning Kit (New England Biolabs). SP denotes a signal peptide. The ERAD-Ls substrate mCD3-δ-ΔTM-HA was the kind gift of Maurizio Molinari at the Institute for Research in Biomedicine, Switzerland.
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2

Cloning and Knockdown of HSP60 in 293FT and H9 Cells

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HSP60 cDNA was purchased from the Korea Human Gene Bank (KRIBB, Daejon, Korea) and cloned into the HindIII/XbaI sites of pcDNA3.1(+)-Myc-His expression vector (Thermo Fisher Scientific). 293FT (3~4×105 cells/well) cells were transfected with pcDNA3.1(+) or pcDNA3.1(+)-HSP60-myc-His vectors, using Lipofectamine™ 2000 (Thermo Fischer Scientific) according to the supplier’s protocol. Protein was transiently expressed for 48 h, and the cell pellet was lysed in 1% NP40 lysis buffer. Cell lysates were subjected to Western blot analysis or immunoprecipitation with anti-Myc (Thermo Fisher Scientific), anti-His (Thermo Fisher Scientific), or anti-HSP60 antibodies (Santa Cruz Biotechnologies). To knock down HSP60, H9 cells pre-incubated with 10 μm Y-27632 for 1 h were dissociated with TrypLE Select (Thermo Fisher Scientific), and 2×105 cells were seeded into Matrigel (BD Biosciences) coated-feeder free plate in TeSR-E8 medium (STEMCELL Technologies, Vancouver, Canada). The next day, the cells were transfected with HSP60 siRNA #1 and #2 (Bioneer, Daejeon, Korea) or accutarget negative control siRNA (Bioneer) using RNAimax (Thermo Fisher Scientific) according to the supplier’s protocol. The sense sequences of HSP60 siRNA #1, 2 were 5′-GUGUUGAAGGAUCUUUGAU-3′ and 5′-GAAGUUUGAUCGAGGCUAU-3′, respectively. After transfection, the cells were incubated for 48 h before further analysis.
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3

FASLG Promoter Mutational Analysis

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The human FasL luciferase reporter construct (HFLP-Luc) containing 1.2 kb of the FASLG promoter, and the empty control plasmid HsLuc have been described previously.38 (link) HFLP-Luc with single or double mutated LRH-1 binding sites in the FASLG promoter (HFLP mut BS1, HFLP mut BS2, HFLP mut BS1+2) were generated by site-directed mutagenesis using a kit from Stratagene (Quick-Change, Agilent) with primers shown in Table 1. The putative LRH-1 binding sites and in the FASLG promoter and their mutation are depicted in Figure 2a.
The LRH-1 reporter containing 5 copies of the LRH-1 binding motive of the human SHP promoter in the pGL3 basic plasmid (Promega, Mannheim, Germany) has been described previously.39 (link) The Myc/6xHis-tagged LRH-1 expression plasmid was generated by cloning human LRH-1 into a pcDNA3.1 Myc/His expression vector (Invitrogen). The FLAG-tagged LRH-1 expression plasmid was generated by exchanging the Myc/His tag with a 3xFLAG epitope tag. A β-galactosidase expression plasmid was used to normalize transfection efficiency (Invitrogen).
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4

Recombinant Expression and Purification of CLASP2 Isoforms

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Plasmid cDNAs of CLASP2α and CLASP2γ in pEGFP-C1 were obtained from Dr. Akhmanova [Akhmanova et al., 2001 (link)]. An NH2-terminal truncation of CLASP2γ was constructed using the internal restriction sites SacI (GFP-CLASPΔN-SacI). For generation of recombinant CLASP2γ protein, CLASP2γ cDNA was subcloned into pFastBac1 vector (Invitrogen, Grand Island, NY). 6xHis-CLASP2γ recombinant protein was produced in Hi-5 cells using the Bac-to-Bac expression system and purified with Ni-NTA agarose (Qiagen, Valencia, CA) according to procedures described by Tanis et al. [2003 (link)], followed by BioLogicDuo-flow gel filtration chromatography (Bio-Rad, Hercules, CA). The elution fractions were run on sodium dodecyl sulfate (SDS) poly acrylamide gels and stained with Coomassie blue. CLASP2α was amplified by PCR and subcloned into the pcDNA3.1-myc-His expression vector (Invitrogen) using Kpn and SacII restriction sites. The CLASP2α-myc-His construct was expressed in HEK293T cells for 24 h. Cells were solubilized and CLASP2α-myc-His was purified with a same procedure described for CLASP2γ.
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5

Recombinant Expression and Purification of CLASP2 Proteins

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Plasmid cDNAs of CLASP2α and CLASP2γ in pEGFP-C1 were obtained from Dr. Akhmanova (Akhmanova et al. 2001 (link)). An NH2-terminal truncation of CLASP2γ was constructed using the internal restriction sites SacI (GFP-CLASPΔN-SacI). For generation of recombinant CLASP2γ protein, CLASP2γ cDNA was subcloned into pFastBac1 vector (Invitrogen, Grand Island, NY). 6xHis-CLASP2γ recombinant protein was produced in Hi-5 cells using the Bac-to-Bac expression system and purified with Ni-NTA agarose (Qiagen, Valencia, CA) according to procedures described in Tanis et al., 2003 (link), followed by BioLogicDuo-flow gel filtration chromatography (Bio-Rad). The elution fractions were run on sodium dodecyl sulfate (SDS) poly acrylamide gels and stained with Coomassie blue. CLASP2α was amplified by PCR and subcloned into the pcDNA3.1-myc-His expression vector (Invitrogen) using Kpn and SacII restriction sites. The CLASP2α-myc-His construct was expressed in HEK293T cells for 24 hours. Cells were solubilized and CLASP2α-myc-His was purified with a same procedure described for CLASP2γ.
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6

PTEN 3'UTR Luciferase Assay

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The PTEN cDNA sequence was cloned and connected into the pcDNA3.1‐Myc/His expression vector (Invitrogen), with sequencing being used to confirm accurate construct construction. In luciferase reporter assays, the 3′‐UTR of PTEN wild type (WT) sequence was cloned and connected into the pmiRGLO vector (Promega, WI, USA), with site‐directed mutagenesis additionally being used to generate a mutated (MUT) version of this reporter vector. miR‐20a mimics, inhibitors, PTEN siRNAs (5′‐GCAGCCGTTCGGAGGATTATT‐3′ and 5′‐GTCAACAACTTACACTTATTT‐3′) and corresponding control constructs were obtained from Shanghai GenePharma (China).
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