The largest database of trusted experimental protocols

3 protocols using pdha1

1

Western Blot Analysis of Cellular Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed in lysis buffer (20 mmol/L Tris-HCl pH 7.5, 150 mmol/L NaCl, 1% Triton X-100, 1% sodium pyrophosphate, Protease Inhibitor Cocktail) for 30 min on ice. The supernatant was collected after centrifugation at 14,000×g for 20 min at 4°C. Protein concentrations were determined using the BCA protein assay kit. Proteins were separated on the 12% SDS-PAGE gel and transferred onto a PVDF transfer membrane. Western blot analysis followed a standard procedure. NDUFA4, ENO2, MCT1 and β-catenin antibodies were obtained from Sigma (St Louis, MO). AMPKα, phospho-AMPKα (Thr172), PDHA1, E-cadherin, N-cadherin and β-actin were obtained from Cell Signaling Technology (Danvers, MA). The antibody for cytokeratin 18 was obtained from Millipore (Boston, MA). HIF1α antibody was obtained from Abcam (Cambridge, MA). Vimentin antibody was obtained from Proteintech (Chicago, IL). NDUFA5 and ADHFE1 antibodies were obtained from Pierce (Rockford, IL). HSP60 antibody was obtained from Stressgen (Victoria, BC).
+ Open protocol
+ Expand
2

Protein Expression Analysis in Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Equal amounts of proteins were separated using SDS-PAGE under reducing conditions. Proteins of interest were detected using the following antibodies; SIRT1 (S5196, Sigma-Aldrich), SIRT3 (5490S, Cell signaling), SIRT6 (GTX105611, Gene Tex), GLUT4 (sc53566, Santa Cruz Biotechnology), HK2 (2857, Cell signaling), PKM1/2 (3190, Cell signaling), PDHA1 (3205, Cell signaling), ACADVL (ab155138, Abcam), ACADL (ab82853, Abcam), CD36 (ABM-5525, Cascade Bioscience), AMPKα (G. Hardie, University of Dundee, Dundee, Scotland, UK), pAMPKα T172 (2531, Cell signaling), ACC (3661, Cell signaling), pACC S79 (3662, Cell signaling), PGC-1α (3242, EMD Millipore), ATP5A, UQCRC2, MTCO1, SDHB, NDUFB8 (MS604, MitoSciences), COX4 (4850P, Cell signaling), CYTC (11940, Cell signaling), eEF2 (2332, Cell signaling), Akt2 (2964, Cell signaling), pAkt S473 (9271, Cell signaling), pAkt T308 (9275, Cell signaling), GSK3α/β (5676, Cell signaling), pGSK3α/β S21/S9 (9331, Cell signaling). Densitometric analysis of immunoblots was performed on four or seven individual samples using Image Lab Software (Bio-Rad Laboratories), and a representative selection is presented in each figure.
+ Open protocol
+ Expand
3

Comprehensive Protein Quantification and Immunoblotting

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunoblotting has been previously described (Messaggio et al. 2017 (link)). Protein samples were quantified using BCA (Pierce). 20–30 µg of protein were loaded per lane. Antibodies against pSHP2 [Y542 (cat# 3751)], SHP2 (cat# 3397), PDHA1 (cat# 3205), HK1 (cat# 2024), Lamin B1 (cat# 12586), p-AMPKα [Thr 172 (cat# 2535)], UCP1 (cat#14670), Perilipin-1 (cat# 9349), beta-actin (cat# 4970) and GAPDH (cat# 5174) were purchased from cell signaling technologies. Glut1 was from Invitrogen (cat# PA1-46152). Tubulin (cat# E7-s) was purchased from the Developmental Studies Hybridoma Bank (DSHB, Iowa City, IA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!