The largest database of trusted experimental protocols

5 protocols using p perk

1

Renal Fibrosis Protein Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Renal tissues were lysed in cell lysates containing the protease inhibitor cocktail (Beyotime, P1005). Equal amounts of the prepared protein were resolved using SDS-PAGE and transferred onto PVDF membranes. After blocking with 5% milk for 1 h, the membranes were blocked with the following primary antibody diluted 1:1,000 (prepared with PBS) at 4°C overnight: Collagen I (Zen-bio, 343,277), Collagen Ⅲ (Zen-bio, 250,064), p-PERK (Affinity, DF7576), p-IRE1α (Affinity, DF8322), GRP78 (Proteintech, 11587-1-AP), ATF-6 (Proteintech, 24169-1-AP), CHOP (Cell Signaling Technology, 2895S), TNF-α (Proteintech, 17590-1-AP), IL-6 (Santa Cruz Biotechnology, sc-57315), IL-10 (Proteintech, 20850-1-AP), VEGF (Proteintech, 15204-1-AP), ACE (Proteintech, 21115-1-AP), AT1 (Abcam, EPR3873), and β-actin (Solarbio, K200058M). The membranes were washed with PBST for three times and then treated with horseradish peroxidase-conjugated secondary antibodies (1:2000; Beyotime, A0216 or A0208) for 2 h at room temperature. Signals were visualized using the ChemiDocXRS + Imaging System (Bio-Rad). All experiments were performed in triplicate and tissue samples were prepared independently for each experiment. The densitometric values of the bands were obtained using Image J software (NIH, Bethesda, MD) and subjected to statistical analysis.
+ Open protocol
+ Expand
2

Neuroprotective Effects of Edaravone

Check if the same lab product or an alternative is used in the 5 most similar protocols
Edaravone injection was purchased from Sinopharm Group Guorui Pharmaceutical Co. LTD (China). Sul-F (> 95% pure) was bought from Shijiazhuang Hairui Pharmaceutical Technology Co. LTD (China). 2,3,5-triphenylte-trazolium chloride (TTC) was acquired from Sigma (USA). Hematoxylin-eosin staining (HE) kit and terminal deoxynucleotidyl transferase mediated dUTP-biotin nick end labeling (TUNEL) kit were purchased from Biyuntian Biotechnology Co. LTD (China). Bcl-2, Caspase3, Bax, CHOP, p-PERK, p-eIF2α, p-IRE1, Caspase12 and ATF4 primary antibodies were purchased from Affinity (China).
+ Open protocol
+ Expand
3

Western Blot Analysis of UPR Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
According to a protocol described previously, 20 ​μg protein of cell lysates were Western imprinted (Wang et al., 2016 (link)) and the membrane was co-incubated with the following antibodies: β-Actin (Abcam, #AC004, UK), eIF2α (Cell Signaling Technology, #ab242148, USA), P-eIF2α (Ser51, Cell Signaling Technology, #ab32157, USA) GRP78 (Cell Signaling Technology, #3177S, USA), PERK (Abcam,ab229912,UK), p-PERK(Affinity, DF-7576), LC3B (Abcam, ab192890, UK), Puromycin (Kerafast, EQ0001,USA). The band density was measured (Quantity One software) and normalized to β-Actin.
+ Open protocol
+ Expand
4

Protein Expression Analysis in HCT116 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total protein was extracted from HCT116 cells in RIPA buffer. A BCA kit was applied to measure the protein concentration. Then, proteins were electrophoresed on SDS-PAGE gels and transferred onto PVDF membranes. After non-specific blocking with BSA for 1 h, the membranes were probed with primary antibodies. Then, the membrane was incubated with secondary antibodies at room temperature for 1 h. The signals were captured through ECL Blotting Detection Reagents. The following primary antibodies were used in this study: Bip (CST#3177); IRE1α (CST#3294); PERK (CST#5683); p-PERK (Affinity#DF7576); p-eIF2α (CST#3398); eIF2α (CST#5324); ATF4 (CST#11815); Aurora A (CST#14475); and GAPDH (CST#2118).
+ Open protocol
+ Expand
5

Western Blot Analysis of ER Stress Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed by RIPA lysis buffer (KeyGEN BioTECH), centrifuged for 15 min at 12,000 g, and determined by BCA Protein Assay Kit (Beyotime Biotechnology, Jiangsu, China). Proteins were separated by 8–12% SDS/PAGE and transferred to polyvinylidene difluoride membranes. The membrane was blocked with TBS-T (containing 5% bovine serum albumin) for 1 h prior at 25 °C and western blotting with polyclonal antibody at 4 °C overnight. The primary antibodies included rabbit polyclonal antibody against GRP78, PKC-δ, p-PKC-δ, CHOP, CASPASE12 (1:1000, Abcam, UK); SREBP1c, FOXO1, SERCA2, CANX, IP3R, p-PERK, PI3Kp85, AKT, p-AKT, IRE1-α, p-IRE1-α (1:1000, Affinity, USA); PERK, ATF6, ATF4 (1:1000, Cell Signaling Technology, USA); GAPDH (1:5000, Proteintech Group, Inc., USA). After 1 h incubation with corresponding secondary antibody, the immunoreactive bands were visualized by a chemiluminescent substrate (ECL, Amersham, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!