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Dna high resolution kit

Manufactured by Qiagen
Sourced in Germany

The DNA High Resolution Kit is a laboratory product designed for the purification and concentration of DNA samples. It utilizes a silica-based membrane technology to efficiently capture and concentrate DNA from various sample types. The kit provides a reliable and reproducible method for obtaining high-quality DNA suitable for downstream applications.

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3 protocols using dna high resolution kit

1

Soybean Genotyping with SSR Markers

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The DNA was extracted from 4 day old seedlings of soybean accessions in two replicates [73 (link)]. The genotyping of the soybean collection was conducted using twenty-five SSR markers (Table S1). These SSRs were selected based on their associations with PH (Table S1). PCR conditions were optimized in order to provide high efficiency and accuracy of amplification [15 (link)]. The PCR was performed in a total volume of 20 µL, comprising 20 ng of genomic DNA, 1 U of Taq polymerase, 0.2 mM of each deoxyribonucleotide triphosphate (dNTP), 10 pM of each primer, 1.5 mM of magnesium chloride (MgCl2), and a standardized 1× Taq buffer solution. Table S1 summarizes information about the chromosome positions, primers, and motifs of each SSR marker in the analysis.
The PCR products were separated on a QIAxcel Connect System for capillary electrophoresis (QIAGEN, Stockach, Germany) using a QIAxcel DNA High Resolution Kit and QX Alignment Marker (15 bp/3 kb) (Figure S3). The OH500 method was used to run the samples with an injection time of 20 s.
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2

Soybean Genotyping with SSR Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
The DNA was extracted from 4 day old seedlings of soybean accessions in two replicates [73 (link)]. The genotyping of the soybean collection was conducted using twenty-five SSR markers (Table S1). These SSRs were selected based on their associations with PH (Table S1). PCR conditions were optimized in order to provide high efficiency and accuracy of amplification [15 (link)]. The PCR was performed in a total volume of 20 µL, comprising 20 ng of genomic DNA, 1 U of Taq polymerase, 0.2 mM of each deoxyribonucleotide triphosphate (dNTP), 10 pM of each primer, 1.5 mM of magnesium chloride (MgCl2), and a standardized 1× Taq buffer solution. Table S1 summarizes information about the chromosome positions, primers, and motifs of each SSR marker in the analysis.
The PCR products were separated on a QIAxcel Connect System for capillary electrophoresis (QIAGEN, Stockach, Germany) using a QIAxcel DNA High Resolution Kit and QX Alignment Marker (15 bp/3 kb) (Figure S3). The OH500 method was used to run the samples with an injection time of 20 s.
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3

Identification of CEP19 mRNA Variants

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In order to identify potential transcript variants, several primers overlapping different exons were designed using the Primer3Plus software (Table S1 [23 (link)]). Additional variants of the cep19 mRNA were identified using 3ʹRACE. First-strand cDNA was synthesized using the GoScript™ Reverse Transcription System (Promega) and an anchored oligo-dT (480 nM final, Table S1). A touch-down strategy was used as follows: 94°C for 15 min; 12 cycles of 94°C for 30 s, 64.8–60.4 for 30 s and 72°C for 3 min; 35 cycles of 94°C for 30s, 60°C for 30 s and 72°C for 3 min and final extension at 72°C for 10 min using specific forward primers and a reverse primer specific to the anchored oligo-dT primer (Table S1). Products were separated and visualized by gel electrophoresis or by means of a Qiaxcell instrument using the DNA high-resolution kit (Qiagen). Amplified products of interest were cloned into pGEM-T Easy vector according to the manufacturer’s instructions (Promega) and were sequenced (Sanger, GATC Biotech).
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