The largest database of trusted experimental protocols

8 protocols using integrin α5

1

Immunofluorescence Staining of Aortic SMCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
Aortic SMC were fixed at 24 hrs after plating by immersion in 2% paraformaldehyde in Dulbecco’s phosphate buffered saline (DPBS). Cells were then washed in a glycine buffer and incubated overnight at 4 °C with primary antibodies against integrin α2 (Abcam, San Francisco, CA, USA), integrin α5 (Milipore Sigma, Burlington, MA, USA), and smooth muscle α-actin (SMα-actin) (Millipore Sigma, Burlington, MA, USA) diluted in a sodium citrate buffer containing BSA and Triton X [24 (link)]. After washing, cells were incubated with Alexa 568 secondary antibody (Invitrogen, Carlsbad, CA, USA) for 1 h at room temperature, washed again and immediately imaged in DPBS. A similar procedure with overnight incubation was followed for the primary antibody against integrin β1 or β3 both pre-conjugated with Alexa 488 (BioLegends, San Diego, CA, USA). For smooth muscle γ-actin (SMγ-actin, Actg2) staining, cells were first fixed with 1% paraformaldehyde in DPBS followed by permeabilization with cold methanol [25 (link)]. Staining was performed as described by using an SMγ-actin primary antibody [26 (link),27 (link)] followed by Alexa 488 secondary antibody (Jackson Immuno Research, West Grove, PA, USA).
+ Open protocol
+ Expand
2

Western Blot Analysis of Cell Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were lysed in buffer containing protease and phosphatase inhibitors (Dingguo, Beijing, China). Proteins were quantified, separated by electrophoresis on 8% polyacrylamide gels, and then transferred to polyvinylidene fluoride (PVDF) membranes. Membranes were blocked and probed with antibodies for integrin α5 (Millipore), integrin β1 (Millipore), ERK1/2 (Cell Signaling, Danvers, MA, USA), phospho-ERK1/2 (Cell Signaling), FAK (04–591; Millipore), Akt (Cell Signaling), p-Akt (Cell Signaling), GSK-3β (Cell Signaling), p-GSK-3β (Cell Signaling), β-catenin (Cell Signaling), and GAPDH (Sigma-Aldrich) overnight at 4 °C, followed by secondary antibodies on the next day. Immunoreactive bands were visualized by chemiluminescence.
+ Open protocol
+ Expand
3

Cytoskeletal Dynamics in MDA-MB-231 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
MDA-MB-231 cells were seeded in an IBIDI-μSlide (IBIDI, Martinsried, Germany) and cultivated overnight plus treatment period. F-actin was stained with rhodamin-phalloidin (1∶400, R 415, Molecular Pobes/Invitrogen) and nuclei with bisBenzimide H33342 (Sigma-Aldrich, St. Louis, MO, USA). The following antibodies were used: Integrin α5 (Millipore, Upstate), p(S19)-MLC (Cell Signalling Technology, Danvers, MA, USA) and Vinculin (Santa Cruz Biotechnology, Santa Cruz, CA, USA). Images were obtained with a Zeiss LSM 510 META (Zeiss, Oberkochen, Germany) or Leica TCS SP8 SMD confocal microscope (Leica, Mannheim, Germany).
+ Open protocol
+ Expand
4

Wnt Signaling Pathway Regulation

Check if the same lab product or an alternative is used in the 5 most similar protocols
Proteins extracted from HTR8/SVneo cells were subjected to Western blotting. The membranes were blotted using primary antibodies against human WIF1, N-cadherin (1:1000; Abcam, Cambridge, MA, USA), Wnt5a, β-catenin, integrin β1, integrin α5 (1:1000; Millipore, Darmstadt, Germany), TIMP2, β-actin (1:500; Santa Cruz, Dallas, Texas, USA) at 4°C overnight and then incubated with a horseradish peroxidase-conjugated secondary antibody (1:2000; Abcam). Densitometric analysis was performed with enhanced chemiluminescence reagents and a Chemi-doc image analyser (Bio-Rad, Hercules, CA, USA).
Co-immunoprecipitation of Wnt5a and WIF1 in HTR8/SVneo cells was examined as previously described [19] . Briefly, cells were lysed in 200 μl of lysis buffer (Beyotime). Lysates were precleared with protein A-agarose (Santa Cruz, Dallas, Texas, USA) and isotype control antibody. The immune complex of 1μg of anti-Wnt5a or WIF1 antibody, protein A-agarose, lysates and binding buffer was then incubated at 4°C overnight. Samples were separated by SDS-PAGE followed by Western blotting using anti-WIF1 or Wnt5a antibody.
+ Open protocol
+ Expand
5

Immunoblotting Analysis of Signaling Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
The immunoprecipitates were resolved on SDS-PAGE and immunoblotted with anti-MUC13 MAb (produced in our lab # clone PPZ020) and anti-HER2 PAb (catalog number A0485; Dako). The proteins were analyzed by immunoblotting with pHER2Y1248 (catalog number 2247), FAK (catalog number 3285 ), pFAK Y925 (catalog number 3284 ), ERK1/2 (catalog number 9102 ), pERK (catalog number 9101 ), pAKTTh308 (catalog number 2965), AKT (catalog number 9272), PAK (catalog number 2602), pPAK1 (catalog number 2605), Integrin-α4 (catalog number 8440), vinculin (catalog number 13901) α-tubulin (catalog number 2144) that were purchased from Cell Signaling 28 (link). The integrin-α5 (catalog number AB1928) was purchased from EMD Millipore. Mouse (catalog number 4021) and rabbit (catalog number 4011) horseradish peroxidase-conjugated secondary antibodies were purchased from Promega.
+ Open protocol
+ Expand
6

Immunoblotting Analysis of Signaling Pathways

Check if the same lab product or an alternative is used in the 5 most similar protocols
The immunoprecipitates were resolved on SDS-PAGE and immunoblotted with anti-MUC13 MAb (produced in our lab # clone PPZ020) and anti-HER2 PAb (catalog number A0485; Dako). The proteins were analyzed by immunoblotting with pHER2Y1248 (catalog number 2247), FAK (catalog number 3285 ), pFAK Y925 (catalog number 3284 ), ERK1/2 (catalog number 9102 ), pERK (catalog number 9101 ), pAKTTh308 (catalog number 2965), AKT (catalog number 9272), PAK (catalog number 2602), pPAK1 (catalog number 2605), Integrin-α4 (catalog number 8440), vinculin (catalog number 13901) α-tubulin (catalog number 2144) that were purchased from Cell Signaling 28 (link). The integrin-α5 (catalog number AB1928) was purchased from EMD Millipore. Mouse (catalog number 4021) and rabbit (catalog number 4011) horseradish peroxidase-conjugated secondary antibodies were purchased from Promega.
+ Open protocol
+ Expand
7

Focal Adhesion Protein Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Antibodies used include: mouse monoclonal antibody (mAb) vinculin (MAB674; Millipore), mouse mAb talin (8d4; Sigma), rat mAbβ1-integrin (AIIBII), rabbit mAb paxillin (Y113; Abcam), rabbit mAb FAK pY397 (141-9; Invitrogen), rabbit polyclonal antibody (pAb) α5-integrin (AB1928; Millipore), mouse mAb MUC1 (HMPV; BD Pharminigen), hamster mAb MUC1 (CT2; Thermo Scientific), rabbit mAb Src Family pY416 (D49G4; Cell Signaling), mouse mAb FAK (77; BD Transduction Laboratories), rabbit pAb paxillin pY118 (2541; Cell Signaling), rabbit mAb pan-AKT (C67E7; Cell Signaling), rabbit pAb AKT pS473 (9271; Cell Signaling); rabbit mAb ERK1/2 pT202/pT204 (197G2; Cell Signaling); rabbit pAb ERK1/2 (9102; Cell Signaling); rabbit mAb Gapdh (14C10; Cell Signaling); Alexa 488 and Alexa 568 conjugated goat anti-mouse and anti-rabbit mAbs (Invitrogen); FITC conjugated anti-hamster mAbs; Cy5-conjugated goat anti-mouse and rabbit mAbs (Jackson); and HRP conjugated anti-rabbit and anti-mouse mAbs. Chemical inhibitors used in these studies include ROCK inhibitor Y-27632 (Cayman Chemical), myosin-II inhibitor (−)-blebbistatin (Cayman Chemical), FAK inhibitor FAK inhibitor 14 (Tocris), MEK inhibitor U0126 (Cell Signaling), PI(3)K inhibitor Wortmannin (Cell Signaling), Src inhibitor Src I1 (Sigma), and DiI (Molecular Probes).
+ Open protocol
+ Expand
8

Integrin Antibody Identification and Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Antibodies for Western blotting included α7 integrin (Invitrogen), α5 integrin, α6 integrin, αv integrin, β1 integrin, β3 integrin, β4 integrin, β5 integrin (Cell Signaling), α3 integrin (US Biologicals), β-actin (Millipore), and IRDye 800CW donkey anti-mouse and IRDye 680RD Donkey anti-rabbit antibodies (LI-COR). Antibodies for immunofluorescence staining included α3 integrin (US Biologicals), α5 integrin, β1 integrin, β4 integrin, αvβ3 integrin (Millipore), α6 integrin (Novus Biologicals), and Alexa594 anti-rabbit and Alexa488 anti-mouse antibodies (Invitrogen). Antibodies for immunoprecipitation included β1 integrin (clone AIIB2, Millipore), and rat immunoglobulin G (IgG; Santa Cruz Biotechnology). Antibodies for integrin inhibition included β1 integrin (clone AIIB2) and β4 integrin (clone ASC-8) from Millipore.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!