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Dynamics v7.8.1.3 software

Manufactured by Wyatt Technology

Dynamics (v7.8.1.3) is a software application developed by Wyatt Technology for the analysis and interpretation of dynamic light scattering (DLS) data. The software provides tools for data acquisition, analysis, and visualization.

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2 protocols using dynamics v7.8.1.3 software

1

Dynamic Light Scattering of Protein Complexes

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A Dynapro Nanostar (Wyatt) equilibrated to 20°C was used for all DLS experiments. Protein samples at ~0.5 mg/mL in 20 mM Tris, 150 mM NaCl, 1 mM DTT, 10 mM CHAPS, pH 8.0 without or with 5 mM CaCl2, 5 mM MgCl2, 5 mM CoCl2 or 0.5 mM CPACC were centrifuged at 12,000 ×g for 5 min before a 5 μL aliquot of the supernatant was removed and loaded into a JC501 cuvette (Wyatt). The sample was equilibrated for 5 min at 20°C before 10 autocorrelation function acquisitions of 5s each were recorded and averaged. Two aliquots (technical replicates) from each sample were averaged, and each experimental condition was performed on three independent/individual protein expression preparations (biological replicates). Autocorrelation functions were deconvoluted using the regularization algorithm to extract polydisperse distributions of hydrodynamic radii and cumulants algorithm to extract weight-averaged monodisperse hydrodynamic radii, using the accompanying Dynamics (v7.8.1.3) software (Wyatt). The dependence of hydrodynamic size on CPACC concentration was determined using ~0.5 mg/mL protein supplemented with 0.01, 0.05, 0.1, 0.5, or 0.75 mM CPACC, using a similar experimental setup as described above and cumulants analysis.
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2

Dynamic Light Scattering of Protein Complexes

Check if the same lab product or an alternative is used in the 5 most similar protocols
A Dynapro Nanostar (Wyatt) equilibrated to 20°C was used for all DLS experiments. Protein samples at ~0.5 mg/mL in 20 mM Tris, 150 mM NaCl, 1 mM DTT, 10 mM CHAPS, pH 8.0 without or with 5 mM CaCl2, 5 mM MgCl2, 5 mM CoCl2 or 0.5 mM CPACC were centrifuged at 12,000 ×g for 5 min before a 5 μL aliquot of the supernatant was removed and loaded into a JC501 cuvette (Wyatt). The sample was equilibrated for 5 min at 20°C before 10 autocorrelation function acquisitions of 5s each were recorded and averaged. Two aliquots (technical replicates) from each sample were averaged, and each experimental condition was performed on three independent/individual protein expression preparations (biological replicates). Autocorrelation functions were deconvoluted using the regularization algorithm to extract polydisperse distributions of hydrodynamic radii and cumulants algorithm to extract weight-averaged monodisperse hydrodynamic radii, using the accompanying Dynamics (v7.8.1.3) software (Wyatt). The dependence of hydrodynamic size on CPACC concentration was determined using ~0.5 mg/mL protein supplemented with 0.01, 0.05, 0.1, 0.5, or 0.75 mM CPACC, using a similar experimental setup as described above and cumulants analysis.
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