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Extrusion kit

Manufactured by Avanti Polar Lipids

The Extrusion kit is a laboratory equipment used for the controlled extrusion of materials. It consists of a set of components that facilitate the precise and consistent formation of extruded samples. The core function of the Extrusion kit is to provide a reliable and customizable platform for the extrusion process.

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5 protocols using extrusion kit

1

Formation of Supported Tethered Bilayer Lipid Membranes

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Au-coated silicon wafers completed with stBLMs61 (link) were made as previously described with minor modifications.38 (link) A mixed self-assembled monolayer (SAM) of the lipid tether compound HC18 (Z20-(Z-octadec-9-enyloxy)-3,6,9,12,15,18,22-heptaoxatetracont-31-ene-1-thiol)61 (link) and β-mercaptoethanol (βME) was obtained by immersing the Au-coated wafers in ethanolic solutions of HC18 and βME (30:70 molar ratio, 0.2 mM final concentration) for >12 h, followed by thorough rinsing with ethanol and drying under N2. Vesicles (25 mg/mL) of the desired lipid composition were prepared by re-suspending dry lipid films in aqueous buffer (pH 5.5) with 500 mM NaCl. The suspension was sonicated for 1 h in a bath sonicator and extruded at least 30 times through a 100-nm pore size polycarbonate membrane (Whatman, GE Healthcare) using an extrusion kit (Avanti Polar Lipids, Alabaster, AL). Formation of stBLM was achieved by incubating the SAM with vesicles for 1 h followed by rinsing with copious amounts of aqueous buffer containing 100 mM NaCl to remove non-fused vesicles.
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2

Preparation of Lipid Vesicles

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Lipid vesicles were prepared according to the protocols published by Jiang et al. (55 (link)). Briefly, lipids were stored in chloroform/methanol (2:1) stock solutions at −20 °C. Lipid films were prepared by drying the appropriate amounts of stock solutions under a stream of dry nitrogen followed by vacuum desiccation (vacuum oven; VWR) at room temperature for ∼2 h to remove traces of organic solvents. The resultant lipid films were hydrated using appropriate volumes of buffer containing 20 mM sodium phosphate, pH 6.5, 50 mM NaCl, 1 mM EDTA, and 1 mM TCEP and subjected to vortex mixing (approximately three times, 60 s each). The multilamellar vesicle solutions were extruded through a 100 nm diameter polycarbonate membrane (Whatman, GE Healthcare) using an extrusion kit (Avanti Polar Lipids, Inc) and used immediately for NMR and size measurements.
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3

Preparation of DPPC and DPPG Liposomes

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Lipids 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) and 1,2-dipalmitoyl-sn-glycero-3-phospho-(1′-rac-glycerol) (DPPG) and extrusion kit were purchased from Avanti Polar Lipids, Inc (Alabaster, Alabama). Large unilamellar vesicles (LUV) of 120-140 nm or small unilamellar vesicles (SUV) of 15-50 nm were used as a model system for fluorescence studies. Liposomes dissolved in chloroform were mixed at the desired molar ratio (1:1 PC/PG or pure PC) and dried by N2 gas. Solvent removal was completed in a vacuum overnight. The lipid film was reconstituted in 20 mM sodium phosphate buffer and 300 mM NaCl pH 7.4. SUV were prepared by sonication above the transition temperature 41 °C. The suspension was sonicated until it changed from milky to clear in appearance. LUV were prepared by extrusion techniques. The lipid suspension was subjected to six freeze-thaw cycles and extruded using 100-nm pore size filters. Peptide and lipid were diluted to the desired molar ratio with a final buffer concentration of 10 mM sodium phosphate and 150 mM NaCl pH 7.4. The effective diameter of the vesicles was determined using dynamic light scattering (See Figure S1, Supporting Information).
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4

Liposome Preparation and Characterization

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Lipids (~30 mM) were stored in chloroform/methanol (2:1) stock solutions. Lipid films were prepared by drying appropriate amounts of the stock solution in a stream of dry nitrogen followed by vacuum desiccation for at least 2 h to ensure removal of organic solvent. To rehydrate the lipid films, appropriate buffer solutions were added (20 mM NaOAc, 100 mM NaCl, pH 5 and 20 mM MOPS, 100 mM NaCl, pH 7) and vortexed at least 3 times for 60 s. The multilamellar vesicle solution was extruded 30 times through a 50-nm diameter polycarbonate membrane (Whatman, GE Healthcare) using an extrusion kit (Avanti Polar Lipids, Inc.). Vesicle sizes (average hydrodynamic radius ~ 40 nm) were determined by dynamic light scattering using Dynapro NanoStar (Wyatt). Each measurement contained ten 5-s acquisitions and globular proteins were used as the model for calculating the radius with regularization fit. Aqueous lysolipid solutions were prepared from 200 mM stock solutions by dissolving dry powder in working buffers. CMC determined using DLS under our solution conditions are 0.6 mM and 0.8 mM for LPG and LPC, respectively. All buffers were filtered through a 0.22 µm filter (Millipore) before use.
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5

Preparation of Unilamellar Lipid Vesicles

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Lipids were stored in organic solvent as described above. Mixed multilamellar vesicles were prepared by drying appropriate amounts of the stock solution in a stream of dry nitrogen. To avoid lipid demixing, this drying process was carried out rapidly at a slightly elevated temperature (~50°C). Subsequently, samples were kept in a high vacuum oven overnight to remove last traces of organic solvent. The lipid mixtures were re-suspended in the appropriate buffer solution. The multilamellar vesicle solution was extruded 30 times through a 100 nm diameter polycarbonate membrane (Avestin, Ottawa, ON) using an extrusion kit (Avanti Polar Lipids, Alabaster, Al). The size of the obtained unilamellar vesicles was checked using dynamic lighting scanning (DLS) (HPPS and Zetasizer, Malvern Instruments, Southborough, MA).
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