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Jasp software

Manufactured by JASP Stats
Sourced in United States, Netherlands

JASP is an open-source, cross-platform software application for statistical analysis. It provides a user-friendly interface for conducting a variety of statistical tests and analyses, including descriptive statistics, t-tests, ANOVA, regression, and more. JASP is designed to be accessible to users of all skill levels, from students to experienced researchers.

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143 protocols using jasp software

1

Comprehensive Fitness and Health Evaluation

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To further analyze changes in anthropometric values, physical fitness, objective and subjective PA and ST, sleep, and psychological variables, statistical comparisons might include (but will not be limited to) t tests, analysis of variance, Mann-Whitney U test, Kruskal-Wallis test, Pearson/Spearman correlation analyses, or linear and multiple regression analyses. Analyses will be performed using JASP software (version 0.14.1, JASP Team).
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2

Bayesian Analysis of TMS-Induced TEP Alterations

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Given we were interested in determining the evidence for pain altering TEP peaks in certain conditions (e.g., active TMS) and pain not altering TEP peaks in other conditions (sham TMS), we used a Bayesian approach as opposed to a frequentist approach, which considers the strength of the evidence for the alternative vs. null hypothesis. Bayesian inference was used to analyse the data using JASP software (Version 0.12.2.0, JASP Team, 2020). Bayes factors were expressed as BF10 values, where BF10’s of 1–3, 3–10, 10–30 and 30–100 indicated “weak”, “moderate”, “strong” and “very strong” evidence for the alternative hypothesis, while BF10’s of 1/3–1, 1/10–1/3, 1/30–1/10 and 1/100–1/30 indicated “anecdotal”, “moderate”, “strong” and “very strong” evidence in favour of the null hypothesis (van Doorn et al., 2021 (link)).
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3

Cognitive and Mood Changes Assessment

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Normality of the distribution was assessed on MoCA and BDI-II scores using the Shapiro–Wilk test of normality. Due to the test result (p < 0.05), nonparametric statistics were used for data analysis. For each variable, the Friedman test was applied to compare the score changes between T0 and T1 within subjects in the two groups. The Mann–Whitney U test was performed to assess the difference between groups at each timepoint, as for the formula: Δ score = T1 score − T0 score, for both MoCA and BDI-II overall scores and for their respective sub-scale scores. Results were considered statistically significant for p < 0.05. All data were analysed using JASP software (Version 0.16.3).
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4

Trauma-Informed Analysis of Demographic Factors

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Statistical analyses were performed using JASP software (2020). Analysis of variance (ANOVA) was performed to test significant differences among groups in demographic and clinical variables. ANOVA with repeated measures and self-report traumatic experience as between-subject factors and post-hoc Tukey's test were performed. Greenhouse-Geisser sphericity correction was applied where appropriate. Demographic variables that differed among groups were added as covariates in the analyses. A statistical threshold of p < 0.05 was set as significant.
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5

Statistical Analysis of Experimental Data

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Descriptive statistics were calculated by using Microsoft Excel® and are reported as mean ± standard deviation (SD). JASP software (version 0.13.1.0) [54 ] was used for the comparison of the mean values. Tests for normal distribution and variance homogeneity of the data were conducted using the Shapiro–Wilk test and the Levene’s test, respectively. For normally distributed data, mean values were compared by one-way ANOVA, utilizing a Welch-correction in case of variance heterogeneity. Adequate post-hoc tests (Tukey, Games–Howell) were performed to compare the mean values to each other. For non-parametric data sets, Kruskal–Wallis analysis of variance with Dunn’s post-hoc comparisons were performed. To account for alpha error accumulation Bonferroni–Holm correction was used. p-values <0.05 were considered statistically significant.
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6

Reliability and Smallest Worthwhile Change Analysis

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The Shapiro-Wilk test was used to determine whether data were normally distributed. Data were presented as mean ± standard deviation (SD). Test-retest reliability (two-way mixed model) was assessed using an intraclass correlation coefficient (ICC) and interpreted as follows: ICC > 0.9 = excellent; 0.9 > ICC > 0.8 = good; 0.8 > ICC > 0.7 = acceptable; 0.7 > ICC > 0.6 = questionable; 0.6 > ICC > 0.5 = poor; ICC < 0.5 = unacceptable [25 (link)]. Smallest worthwhile change (SWC) calculated as 0.2 multiplied by the between-subject SD was reported. Intention to treat analysis was adopted (every participant was considered in the final analysis) [26 (link)]. Levene’s test was used to verify the equality of variance. Two-Ways analysis of variance (ANOVA) was used to detect possible time*group interactions. Between-Group differences was also analyzed using the analysis of covariance (ANCOVA) using baseline values as covariate. Delta difference were reported with 95% confidence intervals (CI) were also reported. Significance was set at p < 0.05 and reported to indicate the strength of the evidence. The Cohen’s d effect size was calculated and interpreted as follows: < 0.20: trivial, 0.20–0.59: small, 0.60–1.19: moderate, 1.20–1.99: large, and > 2.00 very large [27 (link)]. Data were analyzed using JASP software (version 0.9.2; JASP, Amsterdam, The Netherlands).
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7

Analyzing Neuromuscular Fatigue Dynamics

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For further statistical analysis of the parameters FE and rFE (and related muscle activity), only the data of the best trial per condition were used. The best trail was defined by the trial with highest torque during stretch for the dynamic conditions and the trial with the highest torque during isometric steady‐state for the reference contractions.
Values above or below two standard deviations were treated as outliers and excluded from the statistical analysis. The normality of data was checked using the Shapiro–Wilk test. To analyze the results within a session (for electrical stimulation also between sessions one and five), paired sample t‐tests were used including Cohen's d effect size referencing 0.2 as small, 0.5 as medium, and >0.8 as large effect (Cohen, 1988 ). The development of FE, rFE, voluntary activation level, and CV for the voluntary contractions across sessions was analyzed using a one‐way repeated measures ANOVA (five levels = different sessions). If sphericity was violated, Greenhouse–Geisser correction was used. The effect size is presented as ω2. The correlation between FE and rFE was performed using Spearman's rank correlation. A p ≤ 0.05 indicates a significant difference. The JASP software was used for statistical analysis (JASP Team, 2019 ). Data are presented as mean ± SD.
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8

Menstrual Cycle's Effects on Repeated Measures

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As the analyzed variables presented a normal distribution (Shapiro–Wilk test, p > 0.05), repeated measures analysis of variance (ANOVA) with two factors was conducted to assess the main effect of menstrual cycle phases, the main effect of trials, and the interaction effect. When significant main and/or interaction effects were found in the ANOVA, post-hoc tests with Bonferroni correction were conducted to assess differences between the trials, and between menstrual cycle phases. The statistical tests were performed using JASP software, version 0.15.0 (https://jasp-stats.org/), with a significance level set at α < 0.05.
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9

Statistical Analysis of Experimental Data

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Descriptive statistics and the comparisons of the mean values were analyzed with JASP software (version 0.13.1) [21 ] and Minitab 19 (Minitab Inc., State College, PA, USA), respectively. Parametric data were subjected to a one-way ANOVA, that was Welch-adopted in case of variance heterogeneity. Tukey post-hoc and Games–Howell post-hoc tests were performed to compare the mean values. For the nonparametric data, Kruskal–Wallis analyses of variance with Dunn‘s post-hoc tests were performed [22 (link)]. In case of multiple comparisons, the Bonferroni–Holm adjustment was applied to avoid alpha error accumulation. p -values < 0.05 were considered to be statistically significant.
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10

Psychometric Validation of EMRII-BR Scale

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Description statistics were used for continuous and categorical variables. Exploratory factor analysis (EFA) was selected for the present data, considering that the scale is relatively recent in the literature, since the original study was the only one to investigate its psychometric properties. Therefore, once EMRII-BR underwent modifications through translation and adaptation processes, EFA could achieve a new factorial model.(1 )Most EMRII-BR items have positive scores, not reversed. For the analysis, the five items of reversed scoring were duly transformed in the database, for instance: item 6, when receiving a score 2 (1-5 Likert-type scale) by one given individual, was replaced by score 4 (1 )Descriptive analysis, correlation and reliability tests were made in the SPSS, while EFA was made through JASP software.(1 )
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