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54 protocols using lv nc

1

Lentiviral Overexpression and Knockdown of lncSSBP1

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A lentiviral vector containing human lncSSBP1 was purchased from GenePharma (Suzhou, China) and used to overexpression lncSSBP1 (referred to as Lv-lncSSBP1). The negative control lentivirus (Lv-NC) was also purchased from GenePharma. An shRNA lentivirus vector containing the target sequence of lncSSBP1 (5′-GGCGACAAGCAACAACAATCA-3′) was also used to knock down lncSSBP1 expression. The sequence was cloned into pGLVH1 (GenePharma, SuZhou, China) to generate Sh-lncSSBP1. A negative control lentivirus containing a non-targeting shRNA sequence (5′-TTCTCCGAACGTGTCACGT-3′; referred to as sh-NC) was used as a control. All cloned sequences were verified by automated sequencing (GenePharma, SuZhou, China).
All lentiviral vectors, including Lv-lncSSBP1, Lv-NC, sh-lncSSBP1 and sh-NC, were transfected into 293FT cells for packaging. The virus particles were harvested 72 h after transfection of 293FT cells. For stable transfection, BEAS-2B cells were grown in six-well plates to 50% confluence, and 1 mL of viral supernatant was added with 1 μL polybrene. The interference efficiency of the template was verified by RT-PCR analysis.
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2

Lentivirus-Mediated Regulation of CircRNA

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The lentivirus system (LV-NC, LV-circ_0027885, short hairpin (sh) -circ_0027885, sh-NC) was used to infect hBMSCs. These products were purchased from Shanghai Genechem. LV-NC, LV-circ_0027885, sh-NC and sh-circ_0027885 transfected hBMSCs were harvested after incubation with 1 mg/ml puromycin for 72 h. NC mimics, miR-203-3p mimics, NC inhibitor and miR-203-3p inhibitor were obtained from Shanghai GenePharma. At about 70% confluence, hBMSCs were transfected with NC mimics, miR-203-3p mimics, NC inhibitor and miR-203-3p inhibitor by Lipofectamine™2000 (Invitrogen) to perform follow-up experiments.
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3

Generating Lentiviral Vectors Expressing LDOC1

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Human LDOC1 cDNA was amplified, purified, and inserted into a lentiviral vector encoding enhanced GFP [27 (link), 28 (link)]. The recombinant lentiviral vector expressing LDOC1 (Lv-LDOC1) and the empty vector (Lv-NC; negative control, encoding GFP alone) were constructed by Shanghai GenePharma Co., Ltd. (Shanghai, China) and verified by sequencing. Packaging, purification, and titer determination of the recombinant lentiviruses were implemented in HEK293T cells as previously described [29 (link), 30 (link)]. In two precise preparations, the titers of the recombinant lentiviruses were 2 × 108 and 5 × 108 infectious units/mL, respectively.
TPC-1 cells were cultured in 24-well plates and infected with the lentivirus at a multiplicity of infection (MOI) of 20, 50, or 100 for 24 h. Flow cytometry analysis revealed that approximately 95 % of the cells were infected at an MOI of 50. To obtain stable LDOC1 expression, cells were selected using puromycin (Sigma-Aldrich, St. Louis, MO, USA), and LDOC1 expression in the infected cells was validated by means of qRT-PCR and western blotting.
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4

Lentiviral Overexpression of UBXN10-AS1

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The packaged lentivirus vectors of UBXN10-AS1 overexpression (LV-BUXN10-AS1) and empty lentivirus vectors (LV-NC) were purchased from GenePharm (Shanghai, China). For UBXN10-AS1 overexpression, the LV-UBXN10-AS1 or LV-NC were introduced in SKOV3 and A2780 cells at an MOI OF 50-100. After 72h post-infection, the infection efficiency was measured by using RT-qPCR.
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5

Naa10p Regulation in Oral Cancer

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Human oral squamous cell carcinoma cell lines CAL S2) were synthesized by GenePharma (Shanghai, China). RNA interference was achieved by transient transfection using 100 nM siRNA plus Lipofectamine 2000 (Invitrogen) for 48 h. The lentiviral vectors LV-Naa10, LV-shNaa10p and LV-NC (control) were from GenePharma. We generated OSCC cells stably silencing and overexpressing Naa10p, according to a previous study [36] .
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6

Lentiviral Knockdown of lnc-RI in HeLa Cells

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The lentivirus expressing shRNA-lnc-RI-2 (LV-shRNA-lnc-RI) or negative control (LV-NC) were purchased from GenePharma (Shanghai, China). HeLa cells were infected with lentivirus (20MOI) according to the GenePharma Recombinant Lentivirus Operation Manual. After infection, puromycin (2 μg/ml) was added and cultured for 3 days. Real Time PCR was employed to analyze the expression levels of lnc-RI.
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7

Lentivirus-Mediated LBH Overexpression in Sepsis-Induced ALI Mouse Model

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Recombinant lentiviruses carrying sequences encoding LBH (lv-LBH) and a negative control sequence (lv-NC) were constructed by Shanghai GenePharma (Shanghai, China). After lentivirus infection of the A549 cell, LBH-overexpressing cells (lv-LBH) and control cells (lv-NC) were gained through two-week puromycin (2 μg/ml) screening. The sepsis-induced ALI mouse model was randomly divided into three groups (n = 5): the CLP group (the sepsis-induced ALI mouse model without treatment), the CLP+lv-LBH group (A549 cells infected with lv-LBH were instilled intranasally into the sepsis-induced ALI mouse model), and the CLP+lv-NC group (A549 cells infected with lv-NC were instilled intranasally into the sepsis-induced ALI mouse model). Mice were anesthetized with 50 mg/kg pentobarbital sodium and sacrificed by cervical dislocation. The left lung was collected for the measurement of the lung wet/dry weight (W/D) ratio assay. The right lung was stored at -80°C for the future experiments.
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8

Stable Lentiviral Transduction for miR-7-5p

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The LV-miR-7-5p and the control virus LV-NC were purchased from GenePharma (Shanghai, China). Cells were infected with lentivirus for 2 days and then added to puromycin (2.5 mg/mL) for 2 weeks to generate stably transduced cell lines.
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9

Prostate Cancer Cell Line Cultivation and Genetic Manipulation

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The human PCa cell lines PC-3, LNCaP, and DU-145 and the normal prostate epithelial cell line RWPE-1 were obtained from the American Type Culture Collection (ATCC). The PCa cell lines were cultured in RPMI 1640 medium supplemented with 10% fetal bovine serum (FBS, Gibco, USA). RWPE-1 cells were cultured in keratinocyte-SFM that was supplemented with epidermal growth factor and bovine pituitary extract (Gibco, USA). All cells were maintained at 37 °C in humidified air containing 5% CO2 according to the manufacturer's instructions. The siRNAs designed for EIF3J-AS1-AS1, MAFG and corresponding controls were all procured from GenePharma (Shanghai, China) for gene silencing. LV-NC and LV-MAFG for gene overexpression were also procured from GenePharma (Shanghai, China). Cell transfections were performed by using Lipofectamine 2000 (Invitrogen, U.S.A.) following to the manufacturer's instructions.
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10

Lentiviral Modulation of Naa10p Expression

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Naa10p interference lentivirus (LV-shNaa10p), Naa10p overexpression lentivirus (LV-Naa10p), and control lentivirus (LV-NC) were constructed, packaged, and purified by Shanghai GenePharma Co., Ltd. Cal-27 cells were then infected with LV-shNaa10p, LV-Naa10p, and LV-NC. In addition, different multiplicity of infection (MOI) was established to determine the best infection efficiency. Western blot detected the interference and overexpression efficiency of Naa10p.
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