The largest database of trusted experimental protocols

Imagej 5

Manufactured by Bio-Rad
Sourced in United States

ImageJ 5.0 is an open-source image processing software. It provides tools for the display, editing, analysis, and processing of digital images. The software is designed to run on multiple operating systems and is commonly used in scientific research for tasks such as cell counting, fluorescence measurement, and image segmentation.

Automatically generated - may contain errors

2 protocols using imagej 5

1

RNA Isolation and m6A Quantification

Check if the same lab product or an alternative is used in the 5 most similar protocols
All processes were based on an existing protocol [28 ]. For this assay, total RNA from PTECs (5 × 106) was isolated using TriZol (15596-026, Invitrogen, USA), incubated at room temperature for 5 min. Thereafter, polyadenylated mRNA was purified from the extracted total RNA. The concentration of RNA was determined using a spectrophotometer (ND-2000, ThermoFisher, USA), and the quantity of RNA sample was checked via electrophoresis on a 0.8% agarose gel (16500-500, Invitrogen, USA). Next, RNA samples were prepared and loaded with the wells. The wells were then covered with foil to prevent light, and electrophoresis was run at 35 V overnight.
For the m6A content quantification test, after confirming that the RNA samples were transferred from the gel to the membrane, the membrane was blocked in 5% nonfat milk (P0216, Beyotime, China) in TBST at room temperature for 1 h, rinsed in TBST for 15 min, and incubated with the primary antibody (Abcam, UK) against m6A (ab284130) or IgG (ab172730) at 4 °C overnight and with the secondary antibody against rabbit IgG at room temperature for 1 h. Further, BeyoECL Plus reagent was applied to the membrane, and the m6A content was calculated using ImageJ 5.0 (Bio-Rad Laboratories, Inc., Hercules, CA, USA).
+ Open protocol
+ Expand
2

Protein Extraction and Quantification

Check if the same lab product or an alternative is used in the 5 most similar protocols
Based on RIPA lysis buffer (Thermo Fisher Scientific), the extraction of protein was implemented, and the products were subjected to BCA method-based quantification (Beyotime). A total of 30 μg of protein was separated on 12% SDS-PAGE, transferred to PVDF membrane (EMD Millipore), blocked with 5% nonfat milk, and then blocked with primary antibodies CSF1 (3152, 1:1000, Cell Signaling Technology) and GAPDH (ab8245, 1:1000, Abcam). Afterward, goat antirabbit IgG (ab205718; 1:2000; Abcam) was added, and ECL reagent (Cell Signaling Technology) was supplemented to develop protein bands, of which the gray values were assessed using ImageJ 5.0 (Bio-Rad Laboratories).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!