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3 protocols using p nfkbp65 ser536

1

Quantification of Cardiac Protein Signaling

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Total protein was extracted and quantified from heart tissue using the radioimmunoprecipitation assay (RIPA) buffer containing 0.5% protease and phosphatase inhibitor cocktails (Sigma‐Aldrich, #P8340 #P0044). Proteins were denatured and separated on polyacrylamide gels (BioRad, #4561093EDU) using SDS‐PAGE before transfer on PVDF membranes (ThermoScientific, Waltham, MA, #PI88585) as previously described (Ojo et al., 2021 (link)). Membranes were incubated overnight at 4°C in primary antibodies: (p‐eNOS Ser1119 [ThermoFisher, #PIPA564613]; NOS3 [ThermoFisher, #4904]; p‐IKB [Santa Cruz Biotechnology, Dallas, TX, #SC‐8404]; PI3K [Santa Cruz Biotechnology, #SC‐365290]; IKB [Santa Cruz Biotechnology, #SC‐1643]; p‐NFkBp65 Ser536 [#sc‐136548, Santa Cruz Biotechnology]; NFkBp65 [Santa Cruz Biotechnology, #SC‐8008]; and GAPDH [#60004–1, Proteintech, Rosemont IL]) diluted in 5% bovine serum albumin (BSA). Membranes were washed in PBS and incubated for 1 h in anti‐rabbit (Cell Signaling Technology, Danvers, MA #7074) or anti‐mouse (Cell Signaling Technology, #7076) IgG HRP‐linked antibody diluted in 5% milk solution. Proteins were detected using the SuperSignal West Femto Maximum Sensitivity Substrate (ThermoScientific, #34095). Band signals were captured with the ChemiDoc imaging system (BioRad) and quantified with the Image J software, v 1.8.0.
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2

Protein Extraction and Immunoblotting

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Cell layers were lysed in cold buffer (20 mM HEPES, 150 mM NaCl, 10% [v/v] glycerol, 0.5% [v/v] NP-40, 1 mM EDTA, 2.5 mM DTT, 10 ug/L aprotinin, leupeptin, pepstatin A, 1 mM PMSF, and Na3VO4). Protein concentration was determined by using the Bicinchonic Protein assay kit (Merck, Milan, Italy) and 10–20 µg were resolved on SDS-polyacrylamide gels and electro-transferred to a PVDF membrane (Merck). Blots were probed using anti Myostatin polyclonal antibody (Proteintech Europe), anti-phospho-ERK1(T202/Y204)/ERK2 (T185/Y187) (R&D Systems, Space Import-Export s.r.l., Milan, Italy), p-NFkB p65 (Ser 536) (Santa Cruz Biotechnology), anti p-SMAD2 (Cell Signaling Technology, Euroclone, Milan, Italy), anti p-SMAD 3 (Cell Signaling Technology), p16ink4a (St John’s Laboratory, D.B.A. Italia s.r.l.) and reprobed with β-actin or ERK (Santa Cruz Biotechnology) or SMAD 2,3 (Cell Signaling Technology) and incubated in horseradish peroxidase secondary antibodies (Cell Signaling Technology).Immunoblots were developed with Immobilon Western chemiluminescent HRP substrate (Merck). Band intensities were determined using an Alliance system (Uvitec, Cambridge, UK).
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3

Identifying Apoptotic Cells via Hoechst Staining

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Plasmids of Flag-GSK3β1, mCherry-GSK3β1 and mCherry-GSK3β1 S9A mutant were constructed previously (Gao et al., 2014) (link) Blots were probed with antibodies against Flag (A2220, Sigma), HA (H9658, Sigma), GSK3β, phospho-GSK3β (Ser9), Cleaved Caspase 3 (Cell Signaling Technology), GAPDH (ZSGB-BIO, China), mCherry (Abbkine, USA), and p-NF-kB p65 (Ser536) (Santa Cruz)
following the standard protocol (Gao et al., 2013; (link)Gao et al., 2014; (link)Gao et al., 2015) (link). The quantitative analysis of immunoblot results was carried out using Image J software.
Hoechst 33342 staining assay H1299 cells seeded in the 12-well plates at 1×10 5 cells/well were transfected with Flag-GSK3β, siRNA of GSK3β or their controls, and combined with TRAIL (20 ng/ml, 8 hours) treatment. Then, the cells were incubated with 0.1 mg/ml Hoechst 33342 for 10 min at 37°C in incubator. The stained cells were observed using a fluorescence microscope (Olympus, Japan) with 20× objective.
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